Syngnathoides biaculeatus (alligator pipefish): 133491010
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Entry
133491010 CDS
T09681
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
KO
K04954
hyperpolarization activated cyclic nucleotide-gated potassium channel 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133491010
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
133491010
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
LPD1
Motif
Other DBs
NCBI-GeneID:
133491010
NCBI-ProteinID:
XP_061657809
LinkDB
All DBs
Position
17:complement(10910734..10997875)
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AA seq
929 aa
AA seq
DB search
MEDKPNSFSGAKEEKADGNNAFQRQDSIQKTNSAGGQNPKEHGNSVGFKGERDEAMVGFD
DLEAASRQHGFMQRQFGAMMQPGVNKFSLRMFGSQKAVEKEQERVQTAGYWIIHPYSDFR
FYWDLIMLIMMMGNLIIIPVGITFFSEQTTTTWLVFNVASDTIFLVDLVMNFRTGIVNEE
SSEIILDPKVIKMNYLKSWFVVDFLSSIPVDYIFLIVEKGFDSEVYKTARALRIVRFTKI
LSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQYLVPLL
QDFPPDCWVSLNGMVNVSWGKQYSYALFKAMSHMLCIGYGARAPVSMSDLWITMLSMIVG
ATCYAMFVGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQKIHDYYEHRYQGK
IFDEDNILSELNDPLKEEIVNFNCRKLVATMPLFANADPNFVTGMLSKLKFEVFQPNDYI
IREGTVGKKMYFIQHGVASVITKFNKEMKLTDGSYFGEICLLTKGRRTASVRADTYCRLF
SLSVDHFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSLLLQKFQKDLNAGVFNTQENEIL
KQIIRQDREMVMMVDRKQSVSGMNSTPMSGNSIINSPAQQPFSAAFGMSQFQQSSVPLTY
SASAIANASAARMLPAAAAAALYPTTSVSHLGSSSANPQTPLQGAIMSPCSFTAAMCSPP
VQTPLASRSFQYGSPTASQLSLIQQPVGQASLTGQQSQLSQQTPVSAAGGAVTQQQSPQQ
QQVPSPQRGDVHKSTQALQSGSLSRDVRHLSASQPSLPHDMSLGLRAHQASGDSLASITP
LAVTAAAAAIQGMSLQSGIRTTVPQRVNLFRQMSSGALPPVRSTSAAMAAATAASSSSGQ
HRESPGSRRDSVLSSTETDQDKMRFASNL
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaaacccaactcgttctccggtgccaaggaggagaaagcggacgggaataac
gcgttccagcggcaagactccatccagaagaccaacagcgccggcggccagaacccgaag
gagcacggcaactcggtgggcttcaagggagagcgcgacgaggccatggtgggcttcgac
gacttggaggcggcatccaggcagcacgggttcatgcagaggcaattcggggccatgatg
cagcccggagtcaataagttctccctgcggatgttcggcagccagaaagcggtggagaag
gagcaggagcgggtgcagacggccggctactggatcattcacccgtatagcgattttagg
ttttactgggacttgataatgctcatcatgatgatggggaatctaatcatcattcctgtg
ggaataaccttcttctcggagcagaccaccaccacctggctggtgttcaacgtggcctcg
gacaccatcttcttggtcgatctggtcatgaacttcaggacgggcatcgtcaatgaggag
agctctgagatcattctcgaccccaaggtcatcaagatgaactacctgaagagctggttc
gtggtggactttctgtcatccataccagtggattatatatttttgatcgtggagaaaggc
ttcgactcggaggtgtacaagacggcgcgcgccctccgcatcgtccgctttaccaagatc
ctcagtctgctccgcctgttgagactgtctcgactcatccgatacatacatcagtgggag
gagattttccacatgacctatgatctggctagcgctgtggtaagaatatttaacttgata
ggcatgatgctgctgctgtgtcactgggacggctgcctccagtacctggtacccctactc
caagacttcccccctgactgctgggtgtcgctaaacggtatggttaatgtgtcctggggc
aagcagtactcatacgccctcttcaaagccatgagtcacatgctgtgcattggctacggc
gcccgggcgccagtgagcatgtcggacctgtggatcacaatgctgagcatgattgtgggc
gccacatgctacgccatgttcgtgggacacgccacggcactcatccagtcgttggactct
tcacgacggcagtaccaagagaagtacaagcaagtggagcaatacatgtccttccacaag
cttccggcagacatgcgccaaaagatccacgactactacgagcaccgctaccagggcaag
atcttcgacgaggacaacattcttagcgagctcaatgatccactcaaagaggaaattgtc
aacttcaactgccgcaagctggtggctacgatgccactatttgccaatgccgacccgaac
tttgtgacggggatgctgagcaagctaaagtttgaggtgttccagcccaacgactacatc
atccgcgagggcaccgtcggcaagaagatgtacttcatccagcacggcgttgccagcgtc
atcaccaagttcaacaaggagatgaagctgactgacggctcctacttcggagagatctgc
cttctcaccaaaggcagaaggacggccagcgtgagagccgacacctactgccgcctcttc
tcgctgtccgtggaccacttcaacgaggttctggaagagtaccccatgatgcgacgggcc
ttcgagacggtcgccattgaccgcttggatcgtatcgggaagaagaactctttactgctg
cagaagttccagaaggacctgaacgccggcgttttcaacacgcaggagaacgagatcttg
aaacagatcattcgccaggaccgggagatggtgatgatggtggaccgcaagcagtcggtc
agcgggatgaactcgacgccaatgtccggcaattccatcattaactcgccagcacagcag
cccttctccgccgccttcgggatgagtcagttccagcagtcgtcggtccctttgacctac
agtgcttcagctattgccaacgcctccgctgcccgaatgctgccggctgccgccgcagcg
gccctctaccccactaccagcgtttcccatctcggttcctcctccgccaacccccagacg
ccgctccagggcgccatcatgtcgccgtgctccttcacggccgccatgtgcagcccaccg
gtacagacgccactggccagccgtagcttccaatacggctctcccacggcgtcccagctc
tcgctcatccagcagcctgtcggccaggcatctctcaccggccagcagtcgcaacttagc
cagcagacacccgtgtcagccgcaggtggtgccgtgacgcagcagcagtccccgcagcag
cagcaggtcccttcgccccagcgaggcgacgtccacaagagcacgcaggctctgcagtcc
ggcagcttgagtcgagacgtgcgacacttgtctgcctcgcagccatccctgccgcacgac
atgtcgctcgggctgcgggcgcatcaagcctcgggcgactcgctggcctccatcacgccg
ctcgcggtgacagcggctgcggcggccatccaggggatgagtctccagagcggcatccgc
accacagtgccccagcgggtaaatttgttccggcagatgtcgtcgggggccctgcctccc
gtccgctccacatcagcggcgatggcggcagcgacggcagcctcgtcatcatcaggccaa
cacagggaatcccctggctctcggagagattctgtcctgagcagtacagagactgaccaa
gacaaaatgcgctttgcatcaaatttatga
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