Syngnathoides biaculeatus (alligator pipefish): 133491031
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Entry
133491031 CDS
T09681
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03420
Nucleotide excision repair
sbia04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133491031 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
133491031 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sbia03051
]
133491031 (rad23b)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133491031 (rad23b)
Proteasome [BR:
sbia03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
133491031 (rad23b)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
133491031 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
ubiquitin
UBA
Rad60-SLD
UBA_7
Crinkler
Rad60-SLD_2
UBA_2
CUE
UBA_3
Dsc3_N
EAD1
Motif
Other DBs
NCBI-GeneID:
133491031
NCBI-ProteinID:
XP_061657851
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All DBs
Position
17:10030649..10040742
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AA seq
418 aa
AA seq
DB search
MSQRKRHRFPQVKKISRLYPVCGYNYTAKMLITLKTLQQQTFKIDIDEEETVTALKKRIE
QEKGKDNFPVAGQKLIYAGKILSDDSILKEYKIDEMNFVVVMVTKPKKAAPSQPTPATST
ASTAPSPTPSSTPHNPTTRLPADGQPEARRPAATPANPAPPPRGVWENFGNLMDEAGSNV
VTGASYDAMVTEMMLMGYEREQVVEALRASFNNPDRAVEYLLSGIPGRDLVQARGSETGL
SGPPAGPTGDIHEPDSVGASQGTDNPLNFLRNQPQFHMMRHLIQQNASLLPALLQEIGRE
NPELLQEISNHQEHFIQMLNEPLPESPGPMTDDSGGSGGAQSNSQSGSNMSYIQVTPQEK
EAIERKHGTDDRQSLVWGTGADGIFAIANRQMSARSLKFHVKSVRLSGGTGHTSLLRV
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcgaaagcgtcacagattcccgcaagttaaaaaaatatctcgtttgtacccc
gtctgtggatataactacaccgccaaaatgctgatcactttgaaaactttgcaacagcag
acgttcaaaatcgacattgacgaggaggagacggtaacagcattaaagaagaggattgaa
caagagaagggcaaggacaattttcctgttgcagggcaaaaactcatctatgctggtaaa
atcctgagcgatgattccatcctcaaagaatacaaaattgatgagatgaattttgtggtc
gtcatggtgacaaagcctaaaaaggccgctccatctcagccgacgccagccacgtcgaca
gcaagcacagcgccttctccaacgccatcatccactccgcacaacccaacgacacgactt
ccagcggacggtcaaccagaagcgaggcgacctgctgcgactcctgctaacccggctcct
cccccaaggggtgtctgggagaattttgggaaccttatggacgaggcaggttcaaatgtt
gtgactggcgcgtcgtacgacgccatggtgacagagatgatgctaatgggctatgagaga
gagcaggttgtggaggcgctaagagccagcttcaacaatcccgaccgagccgtggagtac
ctgctctcgggtattccaggcagggacctggtccaggctaggggatctgaaactgggttg
agtggacctcctgctggacccacgggagatatacatgaaccagatagcgtgggtgcctcc
cagggtacagataatccgctgaatttcttgaggaatcagcctcagttccacatgatgcgg
cacctgatccagcagaatgcctcactgcttcccgctctcctgcaagagatcggaagggaa
aatccagagctcctgcaggagatcagcaaccaccaggagcacttcattcagatgctaaac
gagcctcttcccgagtcgcctgggcccatgacagacgattctgggggctctggaggggcg
cagagcaactcgcaaagtggcagcaatatgagctacattcaggtcacaccccaggagaag
gaagccattgaaaggaagcacggcactgatgaccgtcaatcgcttgtctggggaacgggt
gccgacgggatctttgcgattgcgaaccgccaaatgtctgctcgcagcttgaagtttcat
gttaaaagcgttaggctttccggagggactggtcatacaagcttacttcgcgtgtga
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