Syngnathoides biaculeatus (alligator pipefish): 133491118
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Entry
133491118 CDS
T09681
Symbol
dcc
Name
(RefSeq) netrin receptor DCC
KO
K06765
deleted in colorectal carcinoma
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133491118 (dcc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133491118 (dcc)
Cell adhesion molecules [BR:
sbia04515
]
Immunoglobulin superfamily
DCC/UNC5 family
133491118 (dcc)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
C2-set_2
Ig_Rha78A_N
V-set
fn3_SORL1
Interfer-bind
C2-set_3
Ig_5
CRLF2-like_D2
Ig_4
Protocadherin
EphA2_TM
V-set_CD47
Ig_PDGFR_d4
Arylsulfotran_N
FAM176
TM_ErbB1
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
133491118
NCBI-ProteinID:
XP_061658002
LinkDB
All DBs
Position
17:complement(4171309..4483372)
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AA seq
1494 aa
AA seq
DB search
MAGLKDCRRVETPVAPSSSSSISPGGFVDFKFTKEPQDTVTVRGDVLQLDCQAHSEMAPG
TPTITWRKDGVLLSALVDERRQELANGSLLVQNILHSRHHRPDEGEYQCLSTLEGLGSIV
SRTARVTVAGPLRVVVPTESVSSYLGDTALLRCEVSGEPAPIIRWQKNRDDLPMTFDPSS
RLAVLPSGSLQVSRVQPPDSATYRCLADNPGSTRTGTDAELRVLPEPGVNRKLQFLQRPL
RVTALLGTDAVLECSASGYPTPSIQWRRGEEAIQTWNKKYSLLAGSNLIIRSVTDDDSGS
FTCTATNNNHNITASAELSVLVPPQFLNYPTNIYAYESTDIELECAVTGNPPPTIRWMKN
GEEVIPSDYFQIVDGSNLQILGLVKSDEGFYQCIAENIAGSSQAMAQLLLREPVSPSPGV
LLPSAPRDLVPVLVSSRFVRLSWRPPEETGGSVQTYGVYYSKDGNERERSVNVSEPESLE
LMVSNLKPEESYSFRVVAYNDMGPGESTSPLRITTKQDLQVPGKTESLHAEALSPTSIQM
NWETPSTPNGPIMGYRVLWTESLSSKEQSVDVSGLNYKMEGLNKFTQYTVRVLAMNRFGL
GTSSDKIIVTTQSDVPSAPPQNITLEVVLSRSIKVSWQPPPRSAQNGIISAYKIKYRKTG
RRGDQEAIEPNNLWYLFTGLEKGSQYSFQVAAMTMNGTGPPSEWYAAETPENDLDESQVP
DQPSSLHVRPLPNSIIMSWTPPLSPSILVRGYIIGYGVGSPYAETVRVDSKQRYYSIENL
EPSSHYVISLKAFNNAGEGVPLYESAVTRSLTDPIDPSEDDLFHLFDKYPTPMPDTSTPM
IPPVGVQAVSLSSDSVRVSWADNSMTKNQKSSEARYYSVKWKTSYSTSGKYKSADTTTLS
HTVTGLKPNTMYEFAVMVTKGRKSSTWSMTAHATTYEAAPSSAPKDLTVISREGRPRAIL
ISWQPPMEANGRITGYILYYTLDKNIPIDDWVMETISGDRLTHQVVDLNLDTVYYFRIQA
KNAKGVGPLSEPVHFKTAKVEHPDKMANDQGRGGDHAFWPSDSNPIDRSSINGSPIGQMH
PPHGSATPQNNSNLLVIIVVSVGAITVVVVVIVALICTRRSSAQQRKKRASHSANKRKGS
QKDLRPPDLWIHHEEMEMKNIEKAPSVAPSGHDSPIRACQDLPQVAHSQSESQMGSKSSQ
SGADGDEASSCISTLERSLAARRGTRGKIMIPMDSQPSNTPVVSAIPVPSLDSSQYPGIL
PSPSCSFTHNKFSLRPMPFSSLTMDRGYTQVISTDSSSNPLLQQQSPPQQPPPLLPGSSV
PSGEHPPGIGPVPGAPAASTAVASEESQAGPSRTIPTACVRPTHPLRSFTNPLLPPPMST
IDPKVYTSMLPQSIFNLQVSRTRLRGGPKCTTQVRAASLPKPQVKTASLGQAGKARSPLL
PVSVPTAPDIPEEGGTKPTEDSAANVYEQDDLSEQMASLEGLMKQLNAITGSAF
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atggccgggctcaaagactgcaggcgggttgaaaccccagtggccccttcatcttcctct
tcaattagtcctggaggcttcgtagacttcaaattcactaaggagcctcaagacacggtg
acagtgcgaggtgatgtgctacagctcgactgccaggcacactcagaaatggcacccgga
acacccaccatcacatggcggaaggatggcgtgctactcagtgctctggtggatgaacgg
cggcaggaattggccaatggatcgctgctggttcagaatatattgcactcgcgacaccac
cgccctgatgaaggggagtaccagtgcctctccacacttgaaggactaggaagtattgta
agcaggactgcaagagtcactgtggctggtcctctaagggtagttgtccccacagagtca
gtctcgtcataccttggcgacaccgcactgctacgttgtgaggtctcaggggaaccagca
cctataatccgctggcagaaaaaccgagacgatcttccgatgacatttgacccttcatct
cgcctggcagtgctgccatccggttctctgcaggtcagccgtgtccagcctccagactca
gccacgtatcgctgtttggcagacaaccctggcagcacaaggacgggaacagatgctgag
ctgcgggtgctcccagaacctggtgtaaaccgaaaactgcagtttctccagcgtcctttg
agagtaaccgccctgctgggaactgatgctgtgctggaatgttccgcctctggatacccc
actccgagcattcagtggcgcagaggagaagaagcgatccaaacctggaataagaagtat
tctctcttggctggcagcaatctgatcatcaggagtgtcaccgatgatgactctggcagt
tttacctgcactgcgaccaacaacaaccacaacatcactgcaagtgcagaactgagtgtg
ctggttccacctcaatttctcaactatccaaccaatatttacgcctatgaatccactgac
attgagctggagtgtgccgtgacaggaaacccaccaccgaccatacgctggatgaagaac
ggagaagaggttatccccagtgactatttccaaatagtggatggcagtaatttgcagatt
ctcggtttggtcaagtcagacgaaggattttatcagtgcattgcagagaatatcgccggc
agctcacaggccatggctcaactgttgctccgagagccagtgtcccccagcccaggcgtt
ctcctcccctctgccccccgcgacctggtccctgtcctagtgtcaagccgatttgtccga
ctcagttggcgccctccagaggagactggaggatctgtacagacttatggggtttattac
tctaaagatggcaatgaaagagagcggtccgtgaatgtgtcagagcctgagtctttggag
ctgatggtctctaacctgaagccagaggagagttacagcttcagagtcgttgcttacaac
gatatgggaccaggagaaagcaccagccccttgaggatcaccaccaaacaagacctccag
gtacccggcaagacagagtcactacatgctgaagctctgtcaccaacctccatccagatg
aattgggagactcccagcactccaaacggaccaatcatgggctacagagtgctctggaca
gagagcctctcaagcaaggaacagagtgtcgatgtcagtggattaaactacaagatggag
ggactcaataaattcacacagtacacagttcgagtcttggctatgaaccgctttggactc
ggaacttcctcagacaaaatcattgtcaccacccaatcagatgtacccagtgctcctccc
cagaacatcaccttagaggttgtgctttccaggagcataaaggtgtcatggcagcctcct
ccacgtagtgctcagaacggcatcatcagcgcctacaagatcaaatataggaagaccggt
cgccgtggggaccaagaggccattgagccaaacaacctctggtatcttttcacaggtctt
gagaagggcagtcagtacagtttccaagttgcagccatgaccatgaatggaacaggtcca
cccagtgagtggtatgccgctgagacacccgagaatgatttggatgagagtcaagttcca
gaccagcccagctctctccatgtcaggccgctccccaacagtatcatcatgtcatggaca
ccacccctcagccccagcatcctggttcgtggttacatcatcggctatggagtaggaagt
ccctatgcagagacggttcgagtggacagcaagcagagatactactccatcgaaaactta
gaaccaagctcacactatgtgatttccctgaaggccttcaataacgctggagaaggagtt
cccctgtatgagagtgctgtgactcgatctctgacagaccccattgacccatctgaggat
gaccttttccatctctttgataaatacccgactcccatgccagacaccagcacacccatg
ataccccctgttggggtccaagctgtgtctctctcctcggactcagtacgtgtttcatgg
gctgacaattccatgaccaagaaccagaagtcatctgaggcgcgctactactccgtcaaa
tggaagaccagctactccaccagcggcaagtacaagtctgcagacactactaccctcagc
cataccgtcactggcctcaaaccaaacacgatgtacgagtttgctgtgatggtaaccaaa
ggtcgaaaatccagtacttggagtatgacagcacatgctaccacctatgaagcagctcct
agctctgctcccaaagacttgacagtgatcagtcgagagggacggccccgagccatttta
atcagctggcaacccccgatggaggcaaatgggcggatcacaggttatattctttactat
acattggacaaaaacatcccaatagatgactgggtaatggaaacaatcagtggtgaccgg
ctgactcatcaggttgttgatctaaaccttgacacagtgtactacttccggatccaggct
aagaatgccaaaggagttggcccattgtccgaaccagtgcactttaagacagccaaagtg
gaacatccagacaagatggccaatgatcaaggtcgaggaggagaccacgccttctggcca
tccgatagcaacccgattgacaggagcagtataaacgggtctcccattggtcaaatgcat
ccaccccacggcagtgctaccccacaaaataatagtaatcttttggtcattatcgttgtt
tctgtgggagccatcactgtggttgtagtcgtcattgtggcacttatctgtacacgacgc
tcctccgcccaacagcgcaagaaaagagcaagccacagcgccaataagaggaagggcagc
caaaaggatctacgacctcctgacctctggattcatcatgaggagatggagatgaagaac
attgagaaagcgcccagtgtggccccatctggacacgattctcccatccgggcttgccag
gaccttccccaggttgcccacagccaatccgagagccaaatgggcagcaagagtagccaa
tcaggagcagatggtgatgaagcatcaagttgtatttctactctggaaagatctttggct
gccaggagaggaacacgaggcaaaattatgattcctatggattcgcaaccaagcaacaca
ccggtggtcagtgctattccagtgccatctcttgattcctctcagtatcctggaatactt
ccttccccttcatgcagcttcacacacaacaaattcagcttaagaccgatgcctttctct
agcctgaccatggaccgaggatacacacaagttatatccacagattcctcctccaatcct
cttctgcaacagcagtctccaccacaacagcctcctccccttctccctggctcctctgtg
ccctctggagaacatcctccaggcattggcccagttcctggggcccctgctgcctctacc
gctgtcgcatcagaggaatctcaggcaggtccaagtcggaccataccaactgcatgtgtg
cgaccaactcacccactaagaagcttcaccaacccactgttgcctccaccaatgagcacc
attgaccccaaggtgtacacatccatgctaccacaatccattttcaacctgcaagtgtca
aggacgagactcaggggtggacccaaatgcacgactcaggtgagagctgcaagcctccca
aagcctcaagtgaagacggcttctctgggtcaggctggtaaggctcgatcccctctgctt
cccgtctcagttcctacagcgcctgacataccagaggaaggaggaacaaaacccacagag
gattcagctgccaatgtgtatgagcaagatgacctttcagagcagatggctagtttagaa
gggctgatgaagcagctcaacgccattactggctctgccttctaa
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