Syngnathoides biaculeatus (alligator pipefish): 133491339
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Entry
133491339 CDS
T09681
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133491339 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133491339 (zgc:163098)
Spliceosome [BR:
sbia03041
]
Complex A
U2 snRNP components
U2 related factors
133491339 (zgc:163098)
Complex B
133491339 (zgc:163098)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Surp
CID
cwf21
RRM_1
CTK3
DUF4042
SET_assoc
Motif
Other DBs
NCBI-GeneID:
133491339
NCBI-ProteinID:
XP_061658286
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Position
18:complement(5785462..5801028)
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AA seq
874 aa
AA seq
DB search
MADKKGNTVNPIKTLTRKAKEVRKKEEQEKAAVVFEEFLASFEPNQKSEVKTFVRGGIVN
ATKDEEAAEVTKSRLYRPPSKFAPVSEDVPQASSTESKKSAFKKRSEGKKKSNLELFKEE
LKLIQEEREERHKRKQHEPTGGGGYGVLDSPLLGRPTFYDDPTVPTTTNLYISCISPKMN
EEILCKEFGKYGPLASVKIMWPRTGEERCRTSNRAFVAFMTRKDAERALAALDGKVIMGF
EMKLGWGKPARIPPQPLYTPAGVRGAPPPQSGLPFNAQPRGCFRNDFTKPLALSQVDLHK
TLSEAVVKVVIPTERNLLFLIHRMIEFVVREGPMFEAMIMNKEKNNPEYSFLFDNKGQNH
VYYRWKLFSILQGESLTKWRTTDFRMFRGGSLWRPPVLNSYIDRDEEEEVGEEAAATEEE
VKKGQLRAEHKQRLEELLQGLTPTRRDIADAMLFCLERADAAEEVVGHVTQLFSSPLTSL
QKKIASLYLVSDILYNSSAKVAGASYYRKHFEPKLSQIFGDLHEAYKNIQARLQAEQFKQ
KVTSCFRAWEDWAIYPQPFLIHLQNIFLGFAKAGEELAEMVEEPSFKLDGAPLASALIDG
LPLCKEPADDLDGCPMGWDPLDGIPVDDIDGIPLGSALDDIDGMPLDDSKVSVSRGLLSK
WEKTADEGTFSQALPESKWSTASSRDDDNKVNVRVNSLDSGNTENNSSDDSSSSPKHDNA
HFQSSLRSFQMSETQRKKLRELEVKVMKFQDELESGKKQRKTGISIQEHVEHYRNKLLQK
EFEKDDQPEQSTSKSKERPTEDKKDKKKSKKSEDGDRQRSRDYDKRNRKSNSISPIKCPR
QSKRSRSRSPEWRERRSRSQSPHRSHKKTKKSKH
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaaaaaggaaacactgtcaatccaattaaaacactaacaaggaaggcaaaa
gaagtgcgaaagaaggaggagcaagaaaaggcagctgttgtttttgaagaatttttagca
tcatttgagcccaaccagaaaagtgaagtaaaaacatttgtccgcggaggcatcgtgaat
gcaacaaaagatgaggaagcagcagaggtcaccaaaagtaggctttatcgacctccctca
aagtttgctcctgtatctgaagatgtcccacaagcatcatctacagagagtaaaaagtct
gcttttaaaaaaaggtcagaaggaaagaagaagagcaacctagagctcttcaaagaggaa
ctaaagctaattcaagaggagcgcgaggaaagacacaaaagaaagcaacatgaaccaact
ggtggaggaggatatggagttctggattcaccattgctaggacgaccaacattttatgat
gacccaacagtgccaaccaccactaacctatacatcagttgcataagtccaaagatgaat
gaggagatactttgcaaagagttcggtaagtatggtcctctggccagcgtgaagatcatg
tggccccgcacaggcgaggaacgctgcaggacttccaacagagcctttgtggctttcatg
acgcgtaaagacgctgaacgagccttggcagcccttgatggtaaagtgattatggggttt
gaaatgaagctgggatggggcaaaccggctcgaattccacctcagccgctgtacactcca
gcaggggtgaggggtgcaccgcccccccagtctggtcttcctttcaatgctcagccaagg
ggttgctttcgaaatgactttaccaaacccctggcattgtcccaagtagatctccacaag
actctgtccgaagccgtagtcaaagtggttatcccgaccgaaagaaatttattattcctc
atccatcgaatgatagagtttgtggtgcgtgaaggtccaatgtttgaagccatgataatg
aacaaagaaaaaaacaacccagagtacagcttcctttttgacaacaagggtcaaaaccac
gtttactaccgctggaaactattctccatcctccagggtgagtccctgaccaaatggagg
accacagatttccgtatgttccgcggaggctctctttggaggccacccgtactcaacagc
tacatagacagggatgaggaagaggaggtaggggaggaggccgctgcaactgaggaggag
gtgaagaagggacagctccgagccgagcacaagcagaggctggaggagctgcttcagggg
ctcacacccaccagaagagacatcgccgacgccatgctcttctgccttgaacgggcagac
gcggcggaggaagtcgtgggacacgtcactcagttgttctcctcgcctctgacctccctt
cagaagaagattgccagcttgtatctcgtatcagacattttatacaactccagtgccaag
gtagccggggcctcatattatcggaaacattttgaaccgaagctatcacagatatttgga
gatcttcatgaagcgtacaaaaacatacaagcgagactgcaagctgaacagtttaagcaa
aaggtcacaagttgctttcgtgcttgggaggactgggccatataccctcagccttttctt
atccaccttcaaaacatcttcctgggctttgccaaagccggagaggagttggcggaaatg
gtagaagaaccttcctttaaacttgatggcgcaccattggccagcgctctgatagacggg
ctacctttgtgcaaagagccagcggatgaccttgatggctgccccatgggctgggaccct
cttgacggtatccccgtcgacgatatagatggcattcccttgggcagtgccctcgatgac
attgacggaatgccactggatgacagcaaggtgtctgtctccagaggacttttgtcaaag
tgggagaagacagctgatgaggggactttctcgcaagccttgcccgagtccaagtggagc
actgcgtcaagcagggacgatgacaataaagtgaatgtacgtgtcaactcactggatagt
ggcaacacagagaataacagcagtgatgactcgagcagttcgcccaaacatgacaacgca
catttccagagctcgctcagaagttttcaaatgtctgaaacccaaagaaaaaagctgagg
gagctggaagtgaaggttatgaagttccaagatgagctggaaagtggcaagaagcagaga
aagactggcattagcatccaagagcatgtggagcattacaggaacaaactcctccagaag
gaatttgaaaaagatgatcagcctgagcaatcgacatccaaatcaaaagagaggccaaca
gaggacaaaaaagacaaaaagaagagcaagaaaagcgaagacggagatagacaacggagt
cgtgattacgacaagcgcaaccgaaaatcaaatagcatctctcctataaagtgtcccaga
cagtccaaacgatcccgatctcgttctccagagtggagagagcggaggtcccggtcacag
tccccacatcgctcccacaagaagacaaagaagagtaaacattga
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