Syngnathoides biaculeatus (alligator pipefish): 133491376
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Entry
133491376 CDS
T09681
Symbol
paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133491376 (paxbp1)
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133491376 (paxbp1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
133491376
NCBI-ProteinID:
XP_061658373
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All DBs
Position
18:complement(17031962..17043072)
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AA seq
934 aa
AA seq
DB search
MSIHPYLIGLYRLSKYDWSPLVTKMFKRIKRANFRRRNESDEDEREENVQPMLAPTLFGP
VLEEVPFLETSSNNNVSLSPRSNGFGANFKTTKDGRRDKRGKESASVLGPTKGSLLSFDD
DEEEEGPEVFRVKKSNHSKKIVKQLKKEYKEDLEKGGVIKTEAVPQPVVAIKEEVLSKVG
SEHGEEEMEVDSADEQREEAKGSQVQKSSSGNNTGATFNTLSSLNTLRPGEIPDAAFIHA
ARKRRQLARELGGDAPLVEMETPKKRQTQEDQGGSDDEDQDEKRIRFSGVRNKTQRQKIA
EEIGIEGSDDEALDTGHDEEVSRWEQEQIRKGISIPQVQSSQPEDTTAYYQNSYDTQPYG
AGYNMPFTYSVVPPHTNKPPGPADGASAHFGLSVSDLAPVSIDLVKKRLQDRLSHMRTSH
NANINRYTEIQDHLAASESAILQLDGSSNDNADQYQFLQEMRGYVGDLLECFGEKVPAIE
ELEAAMHQLLRQRASRLVQRRQDDIKDESAEFASLSNKAVMAPNLDSFGRDRTLYQESSR
QRRIAEREARRARRRQAREQNGKRAEHKEGLSSDDEETSTDITSFGMERDRITKECKKVF
EDVLEDFHSLDYIKSQFEVWRRNYPECYKDAYIALCLPKLFSPLVRLQLITWNPLEVQCA
NFEYMLWFESLLFYGFEEHSTLLKGDSDIGLLPAIVEKVVLAKLTVLSEQVWDPLSNSQT
ARLVSFIRRLIKGYPTVLHGDNQYTRELLRTVVMRVRRTLDEDVFQPLYPKNLLENKNGG
PYLFYQRQFWTCVKLLRNILQWEGIVSTSCLKDLALDSTLNRYILSALQTTDPCEDNVRK
SQKVVDCLPMQWFIGLKGQQTLPQLEPLCRYLVHLANSLYRSSLGASDIERRVTKDQVKD
IVKMLVHMKAVEHIIAVAAEQGIKDIKSLLETKS
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtccattcacccgtatttgatcggattgtatcgattatctaagtatgattggtcacca
ctagtaacgaaaatgtttaaaaggatcaaacgcgcaaatttccgacgaagaaacgagtca
gacgaggacgagcgggaggagaatgtgcagccgatgctggcgccgacgttgttcgggcct
gttttggaggaggtcccgttcctggagacgtccagcaacaacaacgttagcttaagcccc
aggagcaatggctttggggctaatttcaaaaccacaaaagacggcaggagggacaaaagg
gggaaagagagcgcttcggtgctcggacccaccaaaggcagtttactgagtttcgacgat
gacgaggaagaagaaggaccagaggtcttccgagtgaagaagtccaatcacagcaagaaa
atagtcaagcagctgaagaaagaatacaaagaggacttggaaaagggtggtgtcattaaa
acagaagcagtgcctcaacctgtcgttgccatcaaagaagaagtgctcagcaaagtgggc
agtgaacatggtgaggaagaaatggaggtggacagtgctgacgagcagagggaagaggca
aaagggagtcaagtacagaagagcagcagcggcaacaacaccggggcaacattcaacacg
ctctcctccctcaatactctaagacctggtgagatccctgatgcggcattcattcacgct
gcccgaaaacggcgacaactagccagagagctcgggggagacgccccacttgtagagatg
gaaaccccaaagaaacgtcagacgcaagaagaccagggcggcagcgatgacgaagaccag
gacgagaagaggatccggttcagcggtgtacggaacaaaacccagaggcaaaagatcgct
gaggagattggcatcgaaggcagcgacgacgaggcgctggatacgggtcacgatgaagag
gtgagccggtgggagcaggagcagataaggaaagggatcagcataccacaggtccaaagc
agccaaccggaggacaccacagcctactaccagaacagctacgatactcagccttacgga
gctggctacaatatgcctttcacctacagcgtggtgccaccgcacaccaacaagccccct
ggcccggcagacggcgcttcggctcacttcgggctctctgttagtgacttagccccagtg
tccattgatctggtaaagaaacgcctgcaggataggctcagtcatatgcgtacaagccac
aacgccaacattaatcgctacacagagatccaagatcatctagctgcctcagagagtgcc
atactgcagctggacggctcgtccaatgacaatgcagatcaatatcaattcttgcaagag
atgcgagggtatgttggagacttgcttgagtgtttcggtgaaaaggtgcctgccatcgaa
gagctggaggctgccatgcaccagttactaaggcaacgggcctcacgactcgtccagaga
agacaggatgatataaaagatgaatcggcggagtttgcaagtctttcaaataaagcagtc
atggctcccaatctggactcgtttggtcgtgaccgcacgttgtatcaagagagcagtcgg
cagaggaggatagcagaaagagaggcgcgacgagctcggcggcgccaagcgcgagagcag
aacggaaagcgggcagagcacaaagaaggcttgtcgtctgatgacgaggagacgtcaacg
gacatcaccagcttcgggatggagcgcgatcgtatcactaaagaatgtaagaaagtgttt
gaggatgtgctggaggactttcattccctggactacatcaaatcccaatttgaagtgtgg
aggagaaactaccccgagtgctataaagatgcttacatcgccctctgcttgcccaaactc
ttcagccctctagttcgacttcagctcatcacatggaatcctcttgaggtgcaatgcgca
aattttgaatacatgctctggttcgagtctctgctcttttatggttttgaggagcacagc
acactgttaaaaggagatagtgacattggcctgctcccagctattgtggagaaggtcgtc
ctcgccaaattaacagtgttgtcagaacaagtgtgggaccctctgtccaacagtcagacg
gcacggctggtgagctttattcgcaggttgataaaaggttacccaactgtgctgcacggg
gacaaccagtacacacgggagttgttgagaacagtcgtcatgcgggtgcggcggacgttg
gatgaagatgtcttccaacctctctaccccaaaaatttgctggaaaacaaaaacggtggt
ccctatttattctaccagaggcagttctggacttgtgtgaagctgttaagaaacatcttg
cagtgggaggggattgtctccacttcctgtctaaaggacctggctttagacagcactttg
aatcggtatatcctctccgcgctgcagaccaccgacccctgtgaggacaatgttcgcaag
tcccagaaggtggtggactgtttgccgatgcagtggttcattgggctaaaaggccagcag
acgctgcctcaattggagccactgtgtcgctacctcgtccatttggccaactcattatac
cgcagcagcctgggcgcatcagatatcgagcgacgtgtgactaaggatcaggtgaaagac
atcgtaaagatgctggtgcacatgaaggctgtggagcacatcattgccgtggcagctgag
caaggcattaaagatattaagtctctattggaaaccaaatcctag
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