Syngnathoides biaculeatus (alligator pipefish): 133491480
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Entry
133491480 CDS
T09681
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133491480 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbia01009
]
133491480 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133491480 (ncor1)
Protein phosphatases and associated proteins [BR:
sbia01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133491480 (ncor1)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
133491480 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
133491480
NCBI-ProteinID:
XP_061658619
LinkDB
All DBs
Position
18:4850802..4918102
Genome browser
AA seq
2383 aa
AA seq
DB search
MSSSSGYPPSQGSFSSEQSRYPSHSVQYTFSGTRHQQDFTVPDYRTHTQDPQGRRRPSLL
SEFHPGTERPPERRHGYEQQYHSITSQAEHEALETKRPRMESIAEAHMTRSSSSAGGILL
PMHHTLQDSLRATVEVKKESPFTVKVECPSPGGPTLHLGEEHDTSPSKLSKEELIQSMDR
VDREIAKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVTPPPVEHKHRSIVQIIYDENRKKA
EEAHKILEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKI
CQRYDQLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGT
GLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDP
MKVYKARQFMNVWTEHEKEIFKDKFVQHPKNFGLIASYLDRKCVADCVLYYYLTKKNHNY
KTLVRRNYGRRRGRNQQITRPTQEEKSEDKNEEDKSEKSEKKEDEEKKEEEEKDEKEESR
DIGKDKDKCDAGEDEDGKEQNTPRGRKTANSQGRRKGRITTRSMANEAATVAAEEAPPTT
SEAAVPDPPHLTKSDPAQKSIKEPTKPPTPVASLDAKAGAGESGETSRWTEEEMEIAKKG
LVEHGRNWTAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQDTRRARADRSQGEGL
TTTSPDDDDDNADDSEGGDNSSDTESAPSPSQSDPTKSGDSKRPDSAAGNAPCSDQDMLQ
ASNAKPTDPSYGGLHVKEEKSPEGEATSHEEKSRLASYSGVVHPKTEPQDVDMTSGEIQV
KMEPEIKEKGDKGEHGERQKELHSDNDSSATCSADEDVEAEPERQRILSMEKPSLLSPAG
TVLVSSPKQNPHNIQQMHQRAAAIPPMVPGPYGPAPMPISGFAMLQHQIKAVHASAHQEE
KQRQDQGDLERRPPFNTRSPSLLDRDGKPLPYMPYDMMLALDQEALSGRPGSPYRLSPRD
LSKSSPQPDPNIPNAFRYSVPPVLHPAPNQLIQSLPDGGRMAFSRPSRPPNIPSPPPLIP
TTKPTDKPSFIHGGSISQGTPGTYLPSHAIYGPDGSKNTVGSISLGLPRHQDPNKTASSI
HDGRGNPAKMGDNLAFRGSITQGTPALSQSTVAADLLKGTITKLATEDLSNCDKARDQLA
KGHVIYEGKSGHILSYDAIKNPRENTRSPRTGHELKRTFEMMEGTISRGHPSREGAPFEG
LISRALPREGLHGDSKDRQIITGSIMQGTPRTAAETYEDVVKYGKQIKRESPPIRSFDGG
IGKGKPYEGVNTIKETGRSIHEIPRQEQSGQDLRKTPDLSDRRIIDGSMSQIHSLNQPTI
KHNVKSLITSPNKLPHCLPQLEAMERSKYEESKAVRHTSVVNSTTSVLRSTHQEAAKSQH
SPGMYEDANARRTPVNYSSNSVTRSSPMLGRSSDGTKSAAHERKNAMTPTQRECVPAKSP
VSGADPRASHSPFDPHHRPVVPGEVYRAHLPPHLDPSIAFHRVIDPAFMFPRQPSPTGYH
NTYQLYTMENTRQTILNDYITSQQMQVIPRPDMARGVSPREQPVAMPYPAGARGIIDLAQ
MPPTILLPHPGGTGTPSLERIAYLPGAQPPFTTRAFNPTSISPGHQAHLAAAAAAAANVE
RERERDREQQEKEREKEREQREREIRDRERERANDYMRGSGVEQPGRPGSRGYLHSPSPS
LRTQEVVVQQRPSIFQGKSVITSLMPHSAAAVTAAAQSNSRYSTAADALAALVDIAASAP
PVDVAKVKETKRDERDDELCSAARRPASLSEQQQDPDRRSVPYGSMSLPGGKPHPAYPEG
VGIKDKGPQTPKSRIEEELRTRGKTTITAANFIDVIITRKIAPEKDSRERGSQSSDSSSS
LSSNRYDNTGGGAIEVISPASSPVHSQLEKIDEPQQTAAGMRVYDMSRYRPSAEPPQPSS
QQPPLSQADSYSQIPKTHRVMTLADHISHIITQDFARNQDPPTVSSSAAATFQSTMPSVS
SSVRPKVPSRYSPENQIQAQHHHRPPSRVSPENATDKPRSRPGKSPDRGGRQMESYEPIS
PPQSCQAMEKQETGGPAPQRREADNSEIRNDSRSPGSVSYLPSFFTKLENTSPMVKSKKQ
EIFRKLNSTSGVGDSDVGNAQPGTEIFNLPAVTSSSSINPRNHSFSDPASNLGLEDIIRK
ALMGNLEDRPEEHQGGVGAISSTSNTSSDTRQEANPSPSIVKQKQGKGNSRKSKSPNLGQ
AFSGGDRPSSVSSVHSEGDYHRQAQAQWSWDDRPSSAGSMQFPYNPLTMRIMSTTPPTSI
SSPSIQSQQQPQQALPAGAPVGQQRVWQSLLSEQYEALSDSDD
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtagctctggctacccccctagccaggggagcttcagcagtgagcagagccgt
tacccatcccattctgtccagtacacattcagcggcacgcggcaccaacaggatttcact
gttccagattatcgaactcatacgcaagatccgcagggtcgaagaagaccatctttactg
tctgaattccaccctggtactgaaaggcctccggagagacgccatgggtatgagcagcag
taccactccatcacttctcaggctgaacacgaggcactggaaacgaagcgcccacgcatg
gagtcaattgctgaggcccacatgacccgtagctcttcttctgctgggggtattctcttg
cccatgcaccatactctacaggatagtctcagagccactgtggaggtcaaaaaggagtcg
cctttcactgtgaaagtggaatgcccttccccaggaggacctacgctacacctcggggaa
gagcatgacacgtctccatccaagctatccaaggaggagcttattcaaagtatggaccgt
gtggacagagagattgctaaagtggagcagcagattttcaagctgaagaaaaagcaacaa
caattggaggaggaagcagcaaagccagtagagccagaaaagccagtgacccctccccct
gtggagcacaagcaccgcagcatagtccaaataatctatgatgagaacaggaaaaaagct
gaagaggcccataaaatactggaaggacttggtcccaaggttgagctgcccctctacaat
caaccatcagacacaaaagtttaccatgacaacattaaaaccaatcaagtcatgaggaag
aagctgattctgttttttaagaggcggaaccatgctcgtaaacagagggaacagaagatc
tgccaacgctatgaccagctgatggaagcttgggagaaaaaggtggagcgcatggagaac
aaccccaggcgaaaagccaaggagagcagaacacgggaatactatgaaaggcaattccct
gagattcgcaagcagagagagcagcaggagcgcttccaaagggttggccaaagaggaaca
ggtctctctgcaacaattgctagaagcgagcatgagatttctgaaatcattgatggtctt
tctgagcaggagaataacgaaaaacagatgagacagctgtcagtcatccctcccatgatg
tacgactcggagcagaggcgagtgaaattcatcaacatgaatggcctgatggatgaccca
atgaaggtgtacaaagcccgacaattcatgaacgtttggacagaacatgaaaaagagatc
tttaaagacaagtttgtccagcacccaaagaattttggcctgatcgcctcctatctcgac
agaaagtgtgttgctgactgtgtcctgtactactacctgactaaaaagaaccacaactac
aagacgctggtgagacgcaactacggtagacggaggggaaggaaccagcaaataacacgc
cccacacaagaagaaaagtctgaagataagaacgaagaggacaaatctgagaagtcagag
aaaaaagaagacgaggaaaaaaaggaggaggaagagaaagatgaaaaggaggagtccagg
gacattggcaaggacaaagacaagtgtgacgctggggaggacgaggacggaaaggagcaa
aacacgccgcgtggcaggaagactgccaacagccagggccgacgtaagggaaggatcacc
acacgctccatggctaatgaagctgccactgtggcggcagaggaagcacctcccactact
tcagaggctgctgtgccagatcctccacatctcactaaatctgatccagctcagaagtcc
ataaaggaacctacgaaaccgcctactccagtagcttcactagatgctaaagctggtgcc
ggtgaatctggagaaacttctcgctggaccgaggaggagatggagattgccaaaaaaggt
ttagttgagcatgggcgaaactggaccgctatcgccaaaatggtaggcaccaaaagtgag
gcacagtgtaaaaacttttatttcaattacaagagacgtcacaatttggacaacctgcta
caacagcataagcaggacacacggcgggctcgtgccgataggtctcaaggtgaaggttta
accacaacttcaccagatgacgatgacgacaatgcagatgacagtgaaggaggagacaat
agctctgatacagagagcgctccttccccctctcaaagtgaccccaccaagtctggtgac
tccaagagaccagatagcgctgctggtaatgctccgtgctctgatcaggacatgctacag
gctagcaatgcaaaacccacggacccctcctatgggggcctgcatgtcaaggaagagaaa
agcccagagggtgaggctacctctcatgaggaaaagagcaggctggcttcctactcaggt
gtggtccatccaaaaactgaacctcaagatgtggacatgacgtccggagagattcaggtt
aaaatggagccggagatcaaggagaaaggcgacaaaggagaacatggtgagaggcagaag
gagcttcactctgataatgactccagcgccacctgcagtgctgatgaagatgtagaagca
gagcctgaaagacagagaatactttctatggagaagccatctttgctcagccctgcaggg
acggtcctggtgtcttcacccaagcaaaatcctcacaacatccagcagatgcatcagcgt
gcagctgccatcccaccaatggtacctggtccttatggccccgcacccatgcccatcagt
ggctttgcgatgttgcaacaccagatcaaagcagtgcatgcatctgcacaccaggaggag
aagcagagacaagaccagggtgacctagagcgcagaccgcccttcaacacacgcagccca
agtttacttgacagagatggtaagcccctaccctacatgccttatgacatgatgttggct
ctggaccaggaggcgctctctggtcggccaggctctccttacagactctcccccagggat
ctaagcaagtcctcaccccagcctgaccccaacatccccaatgctttccgctacagtgtg
ccgccagtcctccacccagctcccaaccagctgatccagagtctgccagatggaggccga
atggctttcagcagacccagtcgacctcccaacattccctctcctcctcctctcattcca
accaccaaacccactgacaagccatccttcattcatgggggctcaatatctcagggaacc
ccaggcacatacctaccttcacacgccatttatgggcccgatgggagtaaaaacactgtc
ggctcaatctctttgggcctgcctcggcaccaagatccaaacaagactgcttcatcaata
catgatggtcgaggaaatccagcaaaaatgggtgacaacctagctttcagaggctcaatc
actcagggcacaccagccctttcccaatctactgttgctgctgacctgctgaaaggcacc
atcacaaagctagccacagaggacttgagtaactgtgacaaggcaagggaccagctggct
aaaggtcatgtgatctatgagggcaagagcggccacattctttcctatgatgccatcaag
aacccaagggaaaatacccgtagtccaagaactggccatgagttgaaacgcacttttgaa
atgatggagggaaccattagcaggggtcaccctagcagggaaggagctccttttgaaggg
ctgattagcagagccttgcccagagaaggcctccatggagattctaaagacagacaaata
ataactggctctatcatgcaaggaacacctagaacggctgcagaaacatatgaagatgtt
gtgaaatatggaaaacagataaaacgagagagcccaccaatccgctcctttgatggggga
attggcaaaggaaaaccctatgagggagttaacaccattaaagagactgggcgctccatt
catgaaatccctcgacaggagcagtctggccaggacctcagaaagactcctgacctatca
gacaggagaatcatagatggatccatgtctcagattcattctctgaaccaacctacaatc
aagcacaatgttaagtcgttaattactagtcccaataagcttccccactgcttaccgcaa
cttgaggccatggaacggagcaaatatgaagagagcaaggccgtgcgccacacttcggtg
gttaactcaaccacctctgtcttgcgctcaacacaccaagaagctgctaaatctcaacat
agcccaggcatgtatgaggatgccaatgctcggaggacccctgtgaactacagctccaat
tctgtgaccagaagttcacccatgctaggacgttcatcagatggaacaaaatctgctgca
catgaacgaaagaatgccatgacacccacgcaaagagaatgtgtcccagccaagtcccca
gtgtcgggtgctgaccccagggcttctcacagcccctttgaccctcaccacagaccggtt
gttcctggggaagtgtaccgagctcacctgcctccacatcttgacccaagtattgccttc
caccgagtgattgatcctgccttcatgttccccagacagccatcgccaactggctaccat
aacacataccagctatacaccatggagaacacgcgtcagacaatcctcaacgattacatc
acttctcagcagatgcaagtcattccacggcctgacatggcccgtggggtgtcaccgcgg
gaacagcctgttgctatgccatatccagctggagctagagggataattgatctagcccag
atgcctccaactatcctgttgcctcaccctgggggaacaggtactcccagtttggaacgt
atcgcctacctccctggagctcagccccctttcactactagggctttcaacccaacctcc
atatcgccaggtcaccaagcccaccttgctgctgcggctgctgcagctgcaaatgtagag
agggagcgagaacgtgatcgtgagcaacaggagaaggagagggaaaaggaaagggaacag
cgagaacgagaaatacgggaccgggaaagagagcgagcaaatgattacatgcgtggaagt
ggagttgagcagccaggtcggccaggaagccgaggctatctgcactctccttccccttct
ctcaggacgcaggaagtggttgttcaacagcgaccaagcatctttcagggcaagagtgta
atcacttctctaatgccccattcagcagcagcagtaacagcagctgcccagagtaactct
cgctacagtactgcagctgatgcactggccgctttggtcgatattgcagcttctgctcca
cctgttgatgtggccaaagtaaaggagaccaaacgagatgagcgggatgacgaattatgt
tcagcagctcggagaccagcaagcctctcagaacagcagcaggacccagaccggcgatcc
gtgccatatggttccatgtcacttccaggcgggaagccccacccagcgtaccctgagggt
gttggcataaaagataagggccctcaaaccccaaagtcccgcattgaagaggagcttcga
acccgtggaaaaacgaccattacagcagctaacttcattgacgttatcatcacccgaaaa
attgccccagaaaaagactcccgagagcgaggctcacagagctcggactcctcgagtagc
ttgtcatcaaatcgatatgacaacactgggggaggagccattgaagtgataagtcctgcg
agttctccagtccattcccaacttgaaaaaatagatgagccacagcagacagcagctgga
atgcgagtctatgacatgagtcgataccgaccttcagcagagccaccacagcccagttcc
cagcaaccccccttatcccaggccgatagttactctcaaattccaaagactcaccgggtc
atgaccttggcagaccacatttcgcacattataacccaggattttgcacgcaatcaagac
cctcccacagtttcctcttcagccgctgccacattccagagcacaatgccatccgtgtct
tcgtcagttcgacccaaggtgcccagccgctacagccctgagaatcaaatccaggctcaa
catcaccaccgtccccccagcagggtttccccggaaaacgccacagacaaaccaaggtcc
aggcctggtaagtctccagatagaggtgggagacagatggagagctatgaacccatctcg
ccgccacagagctgtcaagccatggaaaaacaggagactggtgggcctgcaccccaaagg
cgtgaggcagacaactctgagatcaggaatgactcacggtcccctggcagtgtcagttat
ctgccctccttcttcaccaaactagagaacacttcacctatggtgaaatccaaaaagcag
gaaatctttcgtaagttgaactccacctctggtgttggtgattctgatgttggaaatgct
caaccgggcactgagattttcaacttgcctgctgttaccagctccagcagcattaacccg
aggaaccactccttcagtgaccctgccagtaacctgggcctagaggacataatccgtaaa
gccttaatgggcaatttggaggacaggccagaagagcaccaaggtggcgtcggtgccatt
agcagcacatccaacacaagcagtgacactcgtcaggaagccaacccgtcacccagtata
gtgaagcaaaagcagggcaaaggcaacagccgtaaatcgaagtctcctaacctgggtcag
gccttctcgggaggggatcgtccttcctcagtgtcctccgtacactctgagggagactat
cacagacaagcacaagcccaatggagttgggatgaccgaccttcgtctgcagggtccatg
cagttcccttacaacccactgaccatgcgcataatgagcaccacgccccccacctccata
tcttccccctccatacagagccagcagcagccgcagcaggcgcttcctgctggagctcca
gtgggccagcagcgtgtgtggcaatctctgctgtcagagcaatacgaggctctgtcggac
agcgatgactga
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integrated database retrieval system
