Syngnathoides biaculeatus (alligator pipefish): 133491481
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Entry
133491481 CDS
T09681
Symbol
med13a
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13a isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133491481 (med13a)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
133491481 (med13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
133491481
NCBI-ProteinID:
XP_061658628
LinkDB
All DBs
Position
18:complement(3556032..3659643)
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AA seq
2158 aa
AA seq
DB search
MSSCFVPNGASLEDCHSNLFCLADLTGIKWKRFVWQGPTSAPILFPVTEEDPILCSFSRC
LKADVLSVWRRSQRQGRREIWLFWWGDDPNFADLIHPELSAEDDGLWENGLSYECRTLLF
KAIHNLLERCLMNRSFVRIGKWFVKPYEKDEKHINKSEHLSCAFTFFLHGESNVCTSVEI
NQHQPIYHLTEEHLSLAQQASSPFQVILSPFGLNGTLTGQSFKMSDPPTQKLIEDWNQFY
LISPGAKNGLLEDKVEDMDWEDDSLASVEVLVGGVRMVYPACLVLVPQSDIPVVAPVGPS
HCTTVYSGGHQVPASLREPAMSLVTLTPPTSPEEVHTVDSHSAQKWFKMPSSCDAFSADR
SNHHGGKIPRRLASQAVERVWQECKINRAQNKRKYSAATNGTCEEDRTERRGTWDFVEPS
ERSYCSCSRHKSVKQRTGGNVGQAQSVGQASQTPIKHKAGGEKPDKSDKQQKRPQTPFHH
RNLTSEDPSMETVATAGHRLAMRSQDGGRFSSSTHVFTIQKTPQINSGVVSTGGATDLAI
SPQPPPLSPHPCEIGEDPREGLKNPSTPNNQHFYQPPLEPCLDGSKGGNEEPAGPEGLTQ
HFSSHHPHSSASGYSEQPEPTVFTGRGVHLEDDSTHSPWRLFNLPRRKEALPPTPVLSGE
KFRDDGFASLDNLVSVTEVMSTSKLPLKVSDERVQMYRARKSQYLAAAITDRDHEPEVDP
YAFEEGDVKFTFSNKKDKAGGEREPGKKHKGEDGGSGTSDDPQRAASNNRIASTSLIHET
DLVVSINDLDNLFNSDEDELGPGSRRLVNGTDEKFSNKEPKPSTLDPVSCINSADLHQMF
PTPPSLEQHIMGYSPMNMCSKEYGSMEPPPGITTLDGTSSLGGQFKIEVEESFCSPKPSE
IKDYSFVYKPELCQAFVGCSMFAPLKSLPSQCLPPIKLPEDSIYRPSWTMGREMLNPMPV
MSILNKDGNIPSVGSAMDQDYNQTYTPQTHTPFMSNSAPPSNSGTGILPSPATPRFSAPT
PRTPRTPRTPRGPSSVQGSLKYENSDLYSPASTPSTCRPLNSVEPATVPSIPEAHSLYVT
LILSESVMNLFKDCNFDSCCICVCNMNIKGADVGVYLSDPISEAQEACSCGFSAVVNRRY
GNGSGLFLEDELDIIGRGSDISREAERRFEELRLSSLDRSAIGRGDGVPDELILLLQDQC
TNPFSPVLGLDDIVTRGVKGGPVPPCVRVEERDFHSDCYMALEHGRQFMDNMSGGKVDEA
LVKSTCLHHWSRKNAVDVSALCSQDVLRVLMSLQPVLQDAIQKKRTVRSWGVQGPLTWQQ
FHKMAGRGSYGTDESPEPLPIPTFLVGYEYDFVVLSPFCLPYWEKLLLDPFGSQRDVGYL
VVCPDNEALLSGAKSLFRDLTAVYESCRLGKHRPISKGYPDGIVLVGGSGPKNLVDQPIS
DWFLKAPSSNDDAFTKLKLYAQVCRHNLAPYLASQLLDSSLLTQPSPPSLSNQPLSTPLT
GSASSSAGQQGAMYNSSVSNSNSNSASVSCNSLVTSSGQPGSGMQSAKASSFTPFGSMVS
QSQGGGPQCGLVGQQAGTQNTSASLDNSNSQTPTEPPESTLERDKIGVPTDGDSHAITYP
PAIIVYIVDPFSYEDSEGVPGPVAAHSSVWTLGLLRCYLEMLQLLPAHIRNSIFVQIVPC
QYLLQPVRGEDRHIYVQHLKSLAFSVFAQCRRPLPISTNVKSLTGFGPGLAIDTALKSSE
RPECVRLYTPPFILAPVKDKQTELGEAFGEASQQYNVLFVGYCLSHDQRWLLATCTDQYG
ELLETCIINIDVPNRARRKKGSVRRLGLQKLWDWCLGLVQMTSVPWRVVIGRLGRIGHGE
LKDWSILLSRRNLQSLSRRLKEMCRMCGISASDTPSILSVCLVAMEPQGSFIIMPDSVST
GSVFGRSTTLNMQTPQLNTPQDTSCTHILVFPTSAFVQVASSNYTNIDTNIDILNASTDG
SDGMGIFDLLDPENELVDPDIINISPNTSPVHSPGSHYHHGGDDSKGQSADRMESREEVA
NLLQQPLALGYFVSTAKAGPLPDWFWSACPQAQNQCPLFLKASLHLHVSSVQSDELLHSK
HSHPLDSNQTSDVLRFVLEQYNALSWLTCDPATQDRRSCLPVHFVVLNQMYNYITNML
NT seq
6477 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttgttttgtaccaaacggggccagcttggaggattgccattccaatctattc
tgtctggcggacttgacaggaatcaaatggaagaggtttgtctggcagggtcccacctct
gcacccatcctgttcccggtgacggaggaggatcctatcctgtgcagcttcagccgctgt
ctcaaggccgacgtgctgagtgtatggcgacgcagccagcgccagggtcggcgggaaatt
tggctgttctggtggggggatgaccccaactttgctgatctcatccaccctgagctttct
gctgaggatgatggactctgggagaacggtctttcctacgagtgccgtacgctgctgttc
aaagccatccacaacttgctggagcgctgcctcatgaatcgtagctttgtgcgcatcggc
aagtggtttgtcaagccctatgagaaggatgagaagcacatcaataagagcgagcaccta
tcttgcgccttcacgttcttcttgcatggggagagcaacgtatgtaccagtgtggagatc
aaccagcaccagcccatctaccatctgactgaggagcatctcagtctggctcagcaggca
tccagtcccttccaagtcatcctgagtccttttgggctgaatggaactctgaccggccaa
tcattcaagatgtctgacccacccacccagaagttgattgaggactggaaccagttttat
ctcatcagtcctggtgctaagaatggcttgttagaggacaaggtggaagacatggattgg
gaagatgattctctggcctccgtagaggtccttgttggtggtgtgcgaatggtgtatcca
gcctgtttagtgctggtgccccagtctgacatccctgttgtggcccctgtggggccctcc
cactgtactaccgtctattcgggtggtcaccaagtgcctgcatccctgcgagagcctgcc
atgtcattggtgaccctcaccccacctacgtcgcctgaggaggtgcacacagtggactct
cactcagcccagaagtggttcaagatgccttcttcatgtgatgcgttcagtgcggacaga
tcaaaccaccatggaggcaagataccacgccggcttgccagtcaggctgtggagcgtgtc
tggcaggagtgtaaaatcaaccgagcccaaaacaagcgaaagtactcagccgcaaccaat
ggtacctgtgaggaggaccggacagagagaaggggaacctgggattttgttgagccttct
gagaggtcgtattgcagctgctctagacataaatcagtgaagcagcgaacaggcgggaat
gtgggccaagctcaatcagtgggccaggcctcccagactcctatcaagcataaggctgga
ggagagaagccagacaagagtgacaagcagcagaaaagaccccagacacctttccatcat
cgaaacctgacaagtgaagacccctcaatggagactgtggcaacggccggccatagactt
gcaatgaggagtcaggatggaggaagattctcgagttcaacacatgtgttcaccattcaa
aaaactcctcagatcaacagtggggtggttagcacaggtggggcgacagacctcgccatc
tccccccaacctccaccacttagtccccacccatgcgagattggtgaagatcccagggag
ggtttgaagaacccttccactcccaacaaccaacacttttaccagcctcctttggagcca
tgcctggatggatcaaagggtggcaacgaggagcctgcgggcccagagggtctgacccag
cacttctcctcgcaccaccctcactcttcagcttctggttattcagaacagcctgaaccc
actgtgttcacaggtagaggggtccacctagaagatgacagcacacactcaccatggaga
ttgttcaacctaccccgcaggaaagaagcactaccgcccacaccagtgctatcgggggaa
aagtttagggacgatggatttgcttcactggacaaccttgtttctgtgaccgaggtgatg
tccacatccaaattgcccctgaaggtctctgatgagcgtgttcagatgtatcgggccagg
aaaagccagtacctggctgctgctatcactgacagagatcatgagcccgaggtggaccct
tatgcctttgaggaaggagatgtgaaattcactttttccaacaaaaaggataaggcaggt
ggggagcgtgagccaggcaagaaacataagggtgaagatggtggatcgggtacatccgat
gatcctcagcgggcagcctcaaacaatcgcatagcctccacaagcttgatccatgagacc
gacctggtggtttccatcaatgaccttgacaacctcttcaactcggatgaagatgaactg
gggcctggttccagacggctggtaaatggaacagatgagaaatttagcaacaaggaacca
aagccatctaccttggacccagtatcctgcattaactcagcagacctgcaccagatgttt
cccacgcccccctcccttgagcagcacattatgggctactcacccatgaatatgtgtagc
aaagagtatggcagcatggagccccctcctggtataaccacactggatggaacgtcatct
ctggggggtcagtttaagatcgaggtggaagagagtttctgtagcccaaagccttctgag
atcaaggactattcatttgtatacaagccagagctgtgccaggcatttgtgggctgctct
atgtttgcgccattaaagtcattaccgagccagtgtctcccacctatcaaactaccagag
gattccatctacagaccaagctggaccatgggcagggagatgctcaatcccatgcctgtc
atgtccattctcaacaaagacggtaacatcccaagtgtgggaagcgctatggaccaggac
tacaaccagacctacaccccgcaaactcacacacccttcatgtccaacagcgctccacca
agtaacagcggcactggtatcctgccttcccccgccaccccacgtttttcagcccctacc
ccacgtacgccacgcacgccacgtacacctcgaggcccctcgagtgttcagggctctctc
aagtatgaaaactcggacctttactcaccagcctccacgccctctacctgccgtccgcta
aactcagtggaaccggccaccgttccttccatcccagaggctcatagcctctacgtcacc
ctcattctctctgaatcagtcatgaacctcttcaaggactgcaactttgacagttgctgc
atctgcgtatgtaacatgaacatcaaaggagcagacgtcggcgtgtacctcagtgacccc
atcagcgaggcccaggaagcctgcagctgcgggttcagtgctgtcgtcaacaggcggtat
ggcaatggctcaggcctcttcctagaggatgagctggatatcatcggccgtggttctgac
atcagtcgcgaggcagaaagacgttttgaggagctgcggctctcctcactggatagaagc
gcaattgggaggggagacggtgtcccggatgaactgattctgctactgcaggatcagtgt
accaaccctttttcacctgttttgggcctggatgacatagtcacacgtggagtgaagggg
ggccctgtgccaccctgtgttcgtgtggaagagagggattttcacagtgactgctacatg
gccctggagcacggcaggcagttcatggacaacatgtctggtggaaaggtggatgaggcg
ctcgtgaaaagcacttgtctgcatcactggtccagaaaaaatgcagtggatgttagtgcg
ctgtgctctcaggatgtgctccgagttttgatgtcccttcagcctgtgctccaagatgcc
atccagaagaaaaggactgtgcggtcatggggtgttcagggcccacttacctggcagcag
tttcacaagatggctggacggggctcatacggcacagatgagtcccctgagccactgccc
atccccactttcctagtgggttatgagtatgactttgtggtgctatctcccttttgttta
ccatactgggagaagctgctgctggatccctttggctcccagcgggacgtcgggtatttg
gttgtctgtcctgacaacgaggctcttctcagcggtgcaaagagcctcttcagggacctc
acagctgtttatgagtcatgtcgacttggtaagcatcgccccatatccaaaggttatccc
gatggcattgtcctcgtcggtggcagtggacccaaaaacctcgtggatcagcctattagc
gactggttcctcaaggctcccagcagcaacgacgatgccttcactaagctcaaactctat
gcacaagtgtgtcgccacaacctcgctccatacctcgcatcacaactgttggatagttct
ctcctcacacaacccagtcccccatcgttatccaaccagccattatctacgcccttgacg
ggatctgcctccagctcagctggccagcagggtgcaatgtacaactcctcggtctccaac
agcaacagcaacagcgcctctgtatcatgcaacagcctggtgacatcatccggacagcct
ggcagtggtatgcagtctgctaaggcaagctcatttaccccctttggaagcatggtcagc
caaagccagggaggtggccctcagtgtggactagtgggacagcaggcaggaacccagaat
actagcgcctctctggacaactcaaacagccagacccccacagagcccccagaaagcact
ttggagcgtgacaagattggcgtgcccacagatggcgattcccacgctatcacctatcct
cctgccattattgtttacatcgtggacccctttagctatgaggattctgaaggtgtcccg
gggccagtagcggcccactctagtgtgtggacgcttggtttgttacgctgctaccttgag
atgcttcaattgctccctgcacatatccgcaattctatttttgtacagattgtcccctgc
cagtatctgcttcagcctgtgagaggtgaagaccgccatatatatgttcagcacctcaag
tctttagccttctccgtcttcgctcagtgcagacgtcctctgcccatttccaccaacgtc
aagtctctgacaggctttggcccaggtttagccatcgacactgcacttaaaagctcagag
agaccggagtgtgtgcgtctgtacactcctccattcatccttgcaccagttaaagacaag
cagactgagctcggggaggcttttggggaggcgtcacagcaatacaatgtgctgtttgtg
ggatactgtctctcccatgatcagcgctggctccttgccacatgcactgaccagtatggg
gaactcctggagacttgcatcatcaacatcgatgttccaaacagggccaggagaaaaaag
ggttctgttcggcgccttggcctgcagaagctgtgggattggtgcttgggacttgtacaa
atgacatcagtaccttggagagtggtaattggccggctgggtaggataggacacggagag
ttaaaggactggagtatattgctcagcagaagaaaccttcagtcgctgagtcgccgtctg
aaggaaatgtgtcgaatgtgtggcatctccgcctcggatactcccagcatccttagtgtg
tgcttagttgccatggagccccagggctccttcattataatgccagactctgtgtcgaca
ggctcagtgtttggccgcagcaccaccttgaacatgcagacgccacagctgaacacgcct
caggacacctcatgtacccacatcctagtcttccccacttctgcctttgtccaagtggcc
agctcgaattacaccaacatagacaccaacatcgacattcttaatgcttccacagatgga
tctgatggtatgggtatctttgatctgctggacccagagaacgaattggtggatcctgat
atcattaacatctcacccaacacttctccagtgcattcccccggatcccattaccaccat
ggcggtgatgacagtaagggccagagtgcagaccgcatggaatctcgcgaggaggtggca
aacctcttgcagcaaccccttgctctcggctactttgtgtctacagcgaaagctggccca
ctgcctgactggttctggtcagcctgtccacaggctcagaaccagtgtccactcttcctc
aaggcctctttgcacctccatgtgtcttcagtgcagtcagatgagctactgcacagcaaa
cactcccaccctcttgactccaatcagacctcagatgtactcagatttgtgctggagcag
tacaacgccctctcctggctgacatgtgacccggcaacacaggaccgacgatcatgcctg
cccgttcactttgtggtgctgaaccagatgtacaactacatcacgaacatgttgtag
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