Syngnathoides biaculeatus (alligator pipefish): 133491483
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Entry
133491483 CDS
T09681
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc)
KO
K04646
clathrin heavy chain
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04142
Lysosome
sbia04144
Endocytosis
sbia05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133491483 (cltca)
04142 Lysosome
133491483 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133491483 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133491483 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133491483 (cltca)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
133491483 (cltca)
Exosome [BR:
sbia04147
]
Exosomal proteins
Proteins found in most exosomes
133491483 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
133491483
NCBI-ProteinID:
XP_061658639
LinkDB
All DBs
Position
18:complement(3806626..3845997)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPSNIGFSTLTMESDKFICIREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDTAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNSEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAGA
EELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQSVPTQQGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFTKIVLYAKKVGYSPDWIFLLRNVMRINPEQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPFY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASVL
LETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AVQVLIEHISNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
VQAADKSSNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGQEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLSWFLQE
NKKECFAACLFSCYDLLRPDVVLETSWRHNIMDFSMPYFIQVMREYLNKVDKLETSESLR
KEEEQATETQPIVYGTPQLMLTAGPSVPVAPQQAYGYGYQAPAAAYGQPAAAPGFGYGM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgccaattcgttttcaggagcacctgcagctccaaaacctggggatc
aacccttccaacatcggctttagcaccctaaccatggagtcagataaattcatctgtatc
cgggaaaaagttggcgagcagactcaggtggtgatcattgacatggccgatccgaataca
ccaatccgcaggcccatctcagccgacagcgccatcatgaatccagcaagcaaggtcatt
gcactcaaagctgccaaaactcttcagatcttcaacattgaaatgaagagtaaaatgaag
gcacataccatgactgatgacgttaccttttggaagtggatttcccttaatacagttgca
cttgtgactgacacggctgtctaccattggagtatggagggtgactctcagcctgtcaaa
gtatttgaccgccactccagcctggcaggctgccaaattatcaactaccgcactgacgca
aagcaaaagtggctccttctcattggtatttcagcacagcaaaatcgggttgtgggagcc
atgcagttatactctgtggatagaaaggtttctcagcccattgaaggacatgctgccagc
tttgcccagttcaagatggagggaaattctgaggagtcaaccctcttctgctttgctgtc
agaggtcaggctggtgggaagttgcacatcattgaagtgggaaccccaccaactggcaac
cagccatttccaaagaaagcagtggatgtcttcttccctccagaagcccaaaatgacttc
cctgttgccatgcagataagctcgaagcaagatgtggttttccttatcaccaaatatggc
tacattcacctctatgacctggaaacaggcacctgcatatatatgaaccgcatcagtggc
gagactatttttgtcacagctcctcatgaggccacctcaggaatcattggagtcaacagg
aagggacaggtgctgtcagtctgtgtggaggaagaaaacatcataccctacatcaccaat
gtgctacaaaatccagatctggctcttcgtctggcagtacgcaacaacctcgctggagct
gaagagctgtttgctcgcaaattcaacaacctgtttgcggctggcaactattcagaggct
gccaaggtggctgccaatgcaccaaagggtattttgcgaactccagacaccatccgtcgc
ttccagagcgtgcctactcaacaaggccagacttcccccctgctgcagtactttgggatc
ttgttggaccagggtcagctcaacaaatttgaatccctggagctttgcaggccggtcctc
cagcaaggaagaaagcagctgttggaaaagtggctcaaggaagacaagttggagtgctca
gaggagctgggggacctggtgaaggcagtggatcccaccttggcgcttagtgtatacctt
agggccaatgtccccaacaaggtcattcagtgttttgcagagactggccagttcactaag
attgtcctttatgccaaaaaggtgggctactctccagactggatctttcttctgaggaat
gtaatgcggatcaacccagaacaaggcctacagtttgcccagatgctggttcaggatgaa
gagccccttgctgacataacacagatcgtggatgtattcatggaatacaacctgatccag
cagtgtacctcattcctgctggatgccctgaagaacaacagaccatcagagggccctctg
cagacccgcttactggagatgaacctcatgcacgcccctcaggttgctgacgcaatcctg
ggtaaccaaatgttcaccaactatgaccgtgctcacatcgctcaactttgtgagaaggcc
ggactgctgcaaagggcattggagcactacactgacttgtatgacatcaagcgtgctgtg
gtgcacacacaccttctcaaccctgagtggcttgtgaactacttcggctcactctctgtg
gaggactctttggagtgcctcagggccatgctgtctgccaacatccgccagaatctgcaa
atatgtgtgcaagtggcctctaaataccacgagcagcttaccacacagtctctcaccgag
ctctttgagtccttcaaaagctttgaaggtctcttctacttcttgggttccattgtcaac
ttcagtcaggaccctgaggttcacttcaaatacatccaagctgcttgcaagactggccag
ataaaggaagtggagcgcatctgtcgagaaagcaactgttatgatcctgagcgtgtcaag
aacttcctgaaggaagccaaactgactgaccaacttccgctcatcatcgtctgcgaccgt
ttcgactttgtgcatgacctcgtcctgtacttgtaccgtaacaacctgcagaagtacatt
gagatctatgttcagaaggtgaacccaagtcgtctgcctgtggtggtaggtggtctcttg
gatgtggactgctcagaagatgtcattaagagtctgattcttgttgtcaggggacagttt
tcaactgatgaactggtagctgaagtggaaaagaggaacagattgaagctgctgctgcca
tggctagagtctcgcatacacgagggctgcgaggaaccagctactcacaatgccttggcc
aagatctacattgacagtaacaataaccctgaacgcttcttgagggaaaacccgttctac
gacagccgtgtcgttggcaaatactgtgagaagagagacccacacctggcctgtgtggcc
tatgagagggggcagtgtgaccaagagctaatcaatgtctgcaatgagaactcacttttc
aagagcttgtctcgttacctggtgcggcgcaaagatcctgagctgtgggccagtgttctg
ctggaaaccaatcctttcagacgaccacttattgaccaggtggtgcaaacggcactatca
gaaacccaggacccagaagaggtgtcggtcacagtcaaggccttcatgactgctgacttg
cccaacgagctcattgagctgctggagaagattgtgttggacaactctgtcttcagtgaa
cacagaaatctgcaaaatctgttgatcttgacggcgattaaagctgaccggacacgtgta
atggagtacatcaacagacttgacaactacgatgctcccgatattgccaacatcgccatc
agcaacgagctgtttgaagaagcttttgccattttcaaaaagtttgacgtcaacacatcg
gctgttcaggtgctgattgaacacattagcaacctggaccgggcctatgagtttgcagag
cgctgcaatgaaccagctgtgtggagccagctagcgaaggcgcaacttcaaaagggtctt
gtcaaagaagccattgactcctacattaaggctgacgacccctctgcatacatggaggtg
gtgcaggctgccgataagagcagtaactgggaggacttagtcaaattcctccagatggca
cgtaagaaggcccgcgagtcctatgtggagacagagctgatttttgctctggctaaaacc
aatcgcctagctgaactcgaagagttcattaatggacccaacaatgctcatattcagcag
gtcggtgatcgctgttatgacgagaagatgtacgaggctgctaagctgttatacaacaat
gtctccaacttcggtcgcctggcttcaaccctcgtgcacctcggagagtaccaggctgcc
gtagatggggcccgcaaggccaatagcacccgtacctggaaggaagtctgcttcgcttgt
gtagatggtcaggaattccgactagctcaaatgtgcggcctccacattgtggtgcacgct
gatgaattggaagagctgattaattattaccaagaccgtggttattttgaagagctgatc
accatgcttgaggctgctctgggcctggagcgtgcacacatgggcatgttcacagagctg
gccattctttactccaagttcaaaccccagaagatgagggaacaccttgagctgttctgg
tccagagtaaacataccaaaagtcctgagagcagcggaacaagcacatttgtgggcagag
ctggttttcctgtacgacaagtatgaggagtacgacaatgccatcatcaccatgatgaac
cacccaacggatgcctggaaagaaggacagttcaaggacattatcacaaaggtggccaat
gtggaactatactacaaagctgtccagttttatttggaattcaagcccttgttattgaat
gatctgcttatagtgctgtctccacgactggaccattctcgtgctgtcaacttcttcagc
aaggtgaaacaactgccattggtcaagccctatcttcgctcagtgcagaaccacaacaac
aagtcagttaatgaagcacttaacaatctcttcatcacagaggaggactatcaggcttta
aggacctcaatagatgcctatgacaacttcgacaacatctcattggcccagcgtttggag
aagcatgagttaattgagttcagacgaattgcagcatatctcttcaagggcaacaaccgc
tggaaacagagtgtggagctctgcaaaaaggacaggctttataaggatgccatgcagtac
gcatcagagtccaaggacacagagctggctgaggagctgctgtcctggttcctccaggag
aacaagaaggaatgttttgctgcctgcttgttctcctgctatgacttgctgcggcctgat
gtggtgctggagacctcctggaggcacaacatcatggacttttctatgccatacttcatt
caggtcatgagagaatacctcaataaggttgacaagcttgaaacctcagagtcactaagg
aaagaagaggagcaagcaacagagacgcaacccattgtctatggcacaccccagctaatg
ctgacagcgggccccagcgtaccagtggccccccagcaagcatacggctacggctaccag
gcgccagctgccgcgtacggtcagccggccgccgcgccaggtttcggctacggcatgtaa
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integrated database retrieval system
