Syngnathoides biaculeatus (alligator pipefish): 133491484
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Entry
133491484 CDS
T09681
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133491484 (supt6h)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133491484 (supt6h)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
133491484 (supt6h)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
133491484 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
S1
Spt6_S1
S1_RRP5
HHH_3
HHH_9
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
133491484
NCBI-ProteinID:
XP_061658640
LinkDB
All DBs
Position
18:9446923..9463599
Genome browser
AA seq
1745 aa
AA seq
DB search
MSDFIESEAEESEEEFEERDLKPKKTQRFMEEDDEEEEENMEDQDERGNLRGLIDDGDEE
EEEEDDGGGRKSASGGGSDSEEEVRHRRKKRSYNDLDEDDLDLIEENLGVKVKRRKKKYD
RVKTLDDDDDDEKDLIADEIFHGDGDGELEEGEAVHEPLQQADDDDEGEDEESDIDDFIV
DDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFAEFDVDAYDQGEEEEEDQDEEGWD
RPKKQTKRRQGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKLAEDEEL
EEEAEWIFRHGFSTLTISIQESTDYLERGTTTNFSRKGPSTIAKIKEALNFMRNQQFEVP
FIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSYQFEQISADPDK
PLADGIRPLDTADMERLKDVQTLEELSDVYNHFLLYYGRDIPKMQNAAKASKKRLRKIKE
VTEDGEEEEVEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENLRD
SYQRHETEQFPAEPVELAKDYVCSQFPSPEAVLEGTRYMVAMQIAREPLVRHVLRQTFQE
RAKINIKPTKKGKKEVDEAHFAYSFKYLKNKAVKELNGDQFLKMCLAEDEGLLSIDICID
LIGVKGYAGDQTYFEEIKQFYYRDEFSHQVQEWNRQRTLAIERSLKQFLYPQMAKELKSK
LIAEAKESIIRSCCRRLYNWLKVSPYRPDQQLEEDDDLMDESQGKGIRVLGVAYAPSRDT
PVFCALINGEGEVVDFLRLPYFMKRRNAFREDEREKKANDLENLKKFLSSKKPHVVAVAG
ENRDAQMIMEDIKRTIGELEQESSLPAVGVEMVDNELATLYMNSKKSETDFRDYPPLLRQ
AVSIARKIQDPLVEYAQVCSSDEDIICLKLHPLQEHVVKEDLLSALYCEFINRVNEVGVD
VNRAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCA
GFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEI
LENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFNL
LTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDTTGLWQCPFCQQDNFPELSEV
WNHFDSGSCPGQAIGVRTRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDI
EKFSVDLTCRTSDLSDKANEWKLPKDTYYDFDAESEDLKHEEEMKKKQQRTPYIKRVIAH
PNFHNISFNQAEKMMETLAQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAF
SLGHTLWINNEEFEDLDEITARFIQPMASFARDLLSHKNFQECNGGAKEKMEELLVKTKR
EKPTFIPYFVSACKTLPGKFLLGYQPGGKPRVEYVTITPDGFRYRSQIFPSVNGLFRWFK
NHYQEPIPGITPTNSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAV
TGQNQNPNTTPAQWGSSQYGYGGSTGGGGSSSAYHVFATPQQPMATPLMTPSYSYTTPSQ
QTLGTPQYPGSTPQSAHAHPHATQHNHHSGHTSSTPSPSVSSSRGRTPQQQPKPNISNII
GGGSGSSTAAVDWGKMAEQWLKEKEAEGRKKAQRMTPRPSPSPMIESTPMSIAGDATPLL
DEMDR
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcatcgagagcgaggccgaggagtctgaggaagagtttgaagagcgagac
ctcaagcccaagaagacgcagaggttcatggaggaagacgatgaggaagaagaggagaac
atggaggaccaggacgagcgaggcaacctgcgcgggctgattgatgacggcgacgaggaa
gaggaggaggaagacgacggcgggggtcggaagagcgcgagcggaggcggcagcgactca
gaggaggaagtcaggcatcgccgcaagaagcgaagttacaacgacctggatgaggatgac
ctcgacctcattgaggaaaacttgggtgttaaagtgaaaaggaggaagaagaaatatgat
cgcgtgaaaacgctggatgacgacgacgacgacgagaaggacctgatcgccgacgaaatc
tttcacggcgacggagacggtgagctggaggagggcgaggccgtgcacgagccgctccag
caggcggacgacgacgacgaaggggaggacgaggagtcggatattgacgactttatcgtg
gatgatgacggccagcccatcactaaaaaaaggggaaagaaattctctggatacacagat
gcagctctgcaagaggcgcaggagatattcggcggcgacttcgacttcgccgaattcgac
gtcgacgcctatgaccagggcgaggaggaagaggaggaccaagacgaagagggctgggac
cggcccaagaagcagaccaagcggaggcagggccgcaagagcatcttcgagctctacgag
cccagcgagctggagagcagtcacatgaccgaccaagacaacgagatccgctccaccgac
atgcccgagaggtttcagctgcgatctatccctgtcaaactggctgaggacgaggagctg
gaggaggaggcagagtggatctttagacacggcttctccacgctcaccatctccattcag
gagagcacagactatttggagcgcgggacgacgacaaacttcagccggaaaggccccagc
accatcgccaaaatcaaggaggcgctcaacttcatgcggaatcaacagtttgaggttccg
tttatagcgttctacagaaaagaatatgtggaaccagaactgaacatcaatgacctttgg
aaggtgtggcaatgggatgaaaagtggacccagctgaagacccgcaagcagaacctcact
cgcctgtttcagaaaatgcagtcctaccagtttgaacagatctccgccgaccccgacaag
cctctggctgacggaattcgcccgctggacacggctgatatggagaggctgaaggacgtc
cagactctggaggagctgagtgacgtgtacaaccacttcctcctctactacggccgagac
attcccaagatgcagaacgcggccaaagccagcaagaagaggctgcgcaagatcaaggaa
gtcacagaagatggcgaggaggaggaggtggaggtagaagaggaggaggagcagaagggt
ccagacctcaaactggcatcccgcagggacatgtacagtatttgtcagagcgtaggactt
gacggcctggctaaaaaatttggcttaacgcccgagcagtttggtgagaatctgcgagac
agctaccagcgccacgagacagagcagttccccgctgagcccgtggagctggccaaggat
tacgtgtgcagccagttcccgagcccggaggcggtcctggagggcacgcgctacatggtg
gccatgcagatcgcccgcgagccgctggtcagacacgtgctgcgccagaccttccaggag
agggccaagatcaacatcaagcccaccaagaagggcaaaaaggaggtggacgaggcccac
ttcgcctactctttcaagtatctgaagaacaaggcggtgaaggagctcaacggagatcag
ttcctgaagatgtgcttggcggaggacgagggactgctgtccatcgacatctgcatcgac
ctcatcggagtcaaagggtatgcgggcgaccagacgtactttgaggagatcaagcagttc
tactaccgagatgagttcagccatcaagtgcaggaatggaacaggcagcgcactttggcc
atcgagagatccctcaagcagttcctttacccccagatggccaaagaactcaagagcaag
ctcattgctgaagccaaagagagcatcatacggtcctgctgccgccgactgtacaactgg
ttgaaagtgtctccttacaggccagaccagcagctcgaggaagatgacgacctgatggac
gagagtcagggcaaaggcatcagggttctcggagtggcgtatgcacccagcagagatacg
cccgtcttctgtgcgctgatcaatggtgaaggcgaggtggtggacttcctgcgcctgcct
tacttcatgaagaggaggaacgccttcagggaggacgagcgagagaagaaggccaatgac
cttgaaaacctcaagaagtttttgtccagcaagaagcctcacgttgtcgccgtcgccggg
gaaaaccgggatgctcagatgatcatggaggacatcaagagaacaattggcgagctggag
caggaatcgtcgttgccggccgtcggcgtggaaatggtcgacaacgagctggccacgctc
tacatgaacagcaagaaatccgagacggactttcgagattacccccccttgctgcgccag
gccgtgtccattgccaggaagatccaagaccccctcgtggagtacgctcaggtttgcagc
tctgacgaagacatcatttgcctcaaactgcaccccctgcaggagcacgtggtaaaggag
gatctgctgtcagctctctactgcgagttcatcaatcgggtcaacgaggtcggcgtggac
gtgaaccgggccatcgctcaccctcacactcagagtctggtccagtacgtttgcggtctg
ggcccgaggaagggctcccacctgctcaagatcctgaagcagaacaacacgcgtctggag
aacagaacgcagctggtcacgatgtgtcacatgggcccaaaggtcttcatcaactgcgcc
ggtttcatcaagattgacacggcgtcgctgggagacagtaccgactcgtacatcgaagtt
ctggacggttctcgtgtccacccggagacgtacgagtgggctcgcaaaatggccgtggac
gcgctggagtacgacgagtcggccgaggacgccaacccggccggcgctctcgaagagatc
ttggagaacccggaacggctcaaagatctggacctcgacgcctttgctgaggagctcgag
agacagggttacggcaacaagggcatcacgctttatgacatcagagccgagctgagctgc
agatacaaagacctgcgagtcccctaccgagtccccaacacggaggaggttttcaacctg
ctgacgaaggagactccagagaccttctacatcggtaaactaatcacaagcgtggtgacc
gggatagctcaccggcgcccccagggggagagctacgaccaggccatccgtaacgacacc
acgggcttgtggcagtgtcccttctgccagcaggacaacttccccgaactcagcgaggtg
tggaaccactttgacagcggctcctgtcccggccaggccatcggggtgcggaccaggttg
gataacggcgtgcagggatttattcccaccaagttcctcagcgacaaagtggtgaaacac
ccagaggagcgagtgaaggtgggcatgacggtgcactgccgcatcatgaagatcgacatc
gagaagttcagcgtggacctcacgtgtcgcacgtcggacctgtcggacaaggccaacgag
tggaagctacccaaggacacctactatgactttgacgcggaatcggaagacctcaagcac
gaggaggagatgaagaagaaacagcagcgcacaccatacattaagcgcgtcatcgctcac
cccaactttcacaacatcagctttaaccaggcggaaaagatgatggagacgctggcccag
ggggacctgatcattcgacccagcagcaaaggagaaaaccacctcaccgtcacgtggaag
gtggccgacggcatctaccagcatgtggacgtgagagaggaaggcaaagagaacgcgttc
agcttaggacacacgctctggatcaacaatgaggaatttgaagacttggatgaaatcacg
gcccgcttcattcaacccatggcgtcgttcgcccgtgacctgctgagccacaaaaacttt
caagagtgtaacggaggagccaaggagaaaatggaggagctgctggtcaagaccaagagg
gaaaagccgaccttcattccgtatttcgtctctgcttgtaaaactctgcccggaaagttc
ctgctgggataccaacctggaggaaaaccacgggtggagtacgtaaccatcaccccggat
ggcttcaggtaccgctcgcagatctttccctcagtcaacggcttgttccgctggttcaaa
aaccactaccaggagccgataccgggcatcacgcccaccaacagcaacagcagccgcacg
cgcacgccggcctccctcaacgccacgcccgccaacatcaacatcgccgacctcacacga
gccgtcaacgcccttccgcgaaacatgacctcgcagatgttcaacgccatcgctgccgtc
acgggccagaaccagaatcccaacaccacgccggcgcagtggggatccagccagtacgga
tacggaggcagcaccggcggaggcggcagctcctcggcgtatcacgtgtttgccacgccc
cagcagccgatggccacgcccctcatgacacccagctactcgtacacgacgcccagccag
caaacgctgggcacgccgcagtacccgggctccaccccccagtcggcacacgcgcacccg
cacgcgacgcagcacaaccaccacagcggccacacgtcgagcacgccgtcgccgtccgtg
tcgtcgtcgcggggccgaacgccacagcagcagccaaagccaaacatcagcaacataatc
ggcgggggtagcgggagctccacggcagcggtggactggggcaagatggccgagcagtgg
ctgaaggagaaggaggccgaggggcgcaagaaagcccagaggatgaccccgcgaccctcg
cccagccccatgatcgagagcacgcccatgtccatcgccggagacgccacgcccctgctg
gacgagatggaccggtag
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integrated database retrieval system
