Syngnathoides biaculeatus (alligator pipefish): 133491507
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Entry
133491507 CDS
T09681
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133491507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133491507
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133491507
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133491507
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
adh_short_C2
PA
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
133491507
NCBI-ProteinID:
XP_061658723
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All DBs
Position
18:4425250..4520296
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AA seq
803 aa
AA seq
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MSVLAWRLAGLWPWLLMAALQVVMGQPGPESERPALRALIKVTLLKNDPADSPITLEGVF
VGGSAGYAEGKLMQYHPLSLCNTSEDERQESDFITIVKLEQRVPRCLPLQEKALMALKKG
AQAVIFDVSDDVNAAAELRESDSLPRPVVLVDAEDAEELMALVNKNEEANVRIEILVEQP
RWPHYDVGILLTIVLAVLTIILIFAFRYKCKANRTWDSVHQQTMRAINRLETKTYISQGC
AGSQRSRGAWGSASSSNSTPVCAICLEEFQDGQHLRIISCAHEFHKDCVDPWLLQHRTCP
LCMHNIMGAERHAQRNRLQSSPEQRFLHPRPFSSPRNHLFPQHDVPFSMRPQYPRGPSGS
YPSVGQYNMSSPMDNQMLHLLTSRALGTPCGYHHPAEGPRRPHRTGANCRTSSHHYTPRG
SCHNYRSTCPAQRSASNSRVHHIASGTSQTRGAVAHGRLDEGSCSGGSYHTDRSGYLADG
PASDSSSGPCHGSSSDSVLNCTDVSLQGVYGSWSTFRSSLSSDYDPFVYYGPGSVEVEAQ
ARPRSLDSVVNKVGCPEEQPQTVFSHIHYHRHRHHHYEDGERSQVPSRGSDEEQGAAAAA
APPPRGLGKDSPVAPPKPSHCQCQKPDCTHLLSSGTEGRDQDPSTSSGPSLLVSSIPLHL
QTHCCHQGNTPAALGRGCVRNPPTVRFHQSLDLQEDRSVRIHFGQGSGFCCSPPELHPAL
LPVPLILDSGPIDDWPCCAGAHVVWQKRVQEAHSEPQLLGTRTSVEKPPCRSHHSFAADR
NTEFCLYCQKIYHNQGSEEESGV
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctcgcgtggcgcctggccgggctctggccgtggctgctcatggcggccctg
caggtggtgatgggccagccgggcccggagtccgagcggccggccctgcgggcgctcatc
aaggtgacgctgctgaagaacgacccggcggacagtcccatcactctggagggggtgttc
gttggagggagcgccggctacgcggagggcaaactcatgcagtaccacccactgtccctg
tgcaacacgagtgaagatgaacggcaagagagtgacttcatcaccattgtcaaactggag
cagagggttccccgctgtctgccgctacaggaaaaggccctcatggcactgaaaaaggga
gctcaggcagttatttttgatgtcagcgatgatgtcaacgcggctgctgagctgagggaa
agtgactcccttccccgcccggtcgtgctggtggatgccgaggatgccgaggagttgatg
gctttggtcaacaagaacgaggaggctaatgttcgtattgagatattggtggagcagccc
agatggccacattacgacgtgggcatcctgctcaccattgtcctggccgtcctgaccatc
atcctcatctttgctttccgctataagtgcaaggccaatagaacttgggactctgtacat
cagcagaccatgcgagctattaatcgactcgagaccaaaacctacatctctcaggggtgc
gcaggctcacagcgctcccgtggagcctgggggtcagcgagcagctccaactccaccccg
gtgtgtgctatttgcctggaggagttccaggatggtcagcatctaaggatcatctcctgc
gctcatgagtttcataaagactgtgtggatccctggctgttgcaacaccgcacctgccct
ctatgcatgcacaacatcatgggggcagagaggcatgcccagaggaacagactacagtct
agtccagaacaacggttcctccaccctcggcctttcagcagcccacgaaaccacctgttc
ccccagcatgacgtacctttttctatgaggccacaatatcctcgtggaccttcaggctcc
tatccgtctgttggtcaatacaatatgtcatctcccatggacaaccaaatgctacatttg
ctcaccagcagggccctgggcaccccttgtgggtaccaccatccagcagagggtcccaga
aggccgcacaggaccggcgctaactgcaggacttcttctcaccactacaccccccggggg
tcctgtcacaactatcgttcaacttgcccagctcagcgcagcgcctccaactccagagtg
caccacatcgcctcaggcacctcgcagacccgcggagcagtagcccatgggcgactggac
gagggcagctgctccgggggcagctaccacacggaccgcagcggatatttggccgacggg
ccagcgagcgactccagctctgggccgtgtcacggctcgtccagcgactcggttttgaac
tgtaccgatgtgtccctgcagggagtttacggcagctggtccactttccgcagctcactg
agtagcgactacgacccgtttgtatattacgggccgggctctgtggaggtggaagcccag
gcacggcctaggtctctggactctgtggtgaacaaagtgggctgccctgaggaacaacct
caaactgtgtttagccacatccactaccaccgccatagacaccaccactatgaggacggc
gagcgcagccaagtcccgagcagaggttcagacgaggagcaaggggccgctgcggcagca
gcccctcctccgcggggcttggggaaagactcacctgttgccccgcctaagcccagtcac
tgtcagtgccaaaaaccagactgtacacatttgctcagttctgggacagagggtcgggat
caggacccgagcacgtcttcagggccctctctcctggtgtcctccatccccttacatcta
caaacccactgctgccaccagggaaacactcccgcagctctcggacggggctgtgtgcga
aacccccccactgttcgcttccaccagagcttggaccttcaggaggatcggagcgtccgc
atccattttggccaaggctcaggattctgctgctctccccctgaactgcaccccgccctc
cttccagtacctctaattctggactcgggacctatagacgattggccctgctgtgccgga
gcccatgttgtgtggcaaaagcgggtgcaggaggcccactctgagcctcaacttctgggg
accaggacctctgttgagaaacctccttgcaggtcccaccacagcttcgccgcagaccgc
aacacagaattttgtttatactgccaaaaaatataccacaatcagggatctgaagaggag
tccggtgtgtga
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