Syngnathoides biaculeatus (alligator pipefish): 133491508
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Entry
133491508 CDS
T09681
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04080
Neuroactive ligand-receptor interaction
sbia04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133491508
04082 Neuroactive ligand signaling
133491508
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133491508
Ion channels [BR:
sbia04040
]
Ligand-gated channels
GABA-A
133491508
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF6681
Motif
Other DBs
NCBI-GeneID:
133491508
NCBI-ProteinID:
XP_061658732
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All DBs
Position
2:complement(35251379..35283129)
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AA seq
445 aa
AA seq
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MRWLNVHLSPRSGCQSSSKGPKEAATSDNSTVFTRILDGLLDGYDYRLRPGLGENVTEIK
TDIFVTSFGPVSDTEMEYTIDVFFRQTWKDERLCFKGPMEKLSLNNLLASNIWTPDTFFL
NGKKSIAHNMTTPNKLLRLMDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAY
PVSEVVYTWTKDASKSVVVADDGSRLNQYLLIGLTAGTEDIHTSRGQYTVMMAHFYLKRK
IGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAY
ATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDVKKALEAQHPKKREPVVLSKKSNN
ICLAAVNYTPNLTKDTAISTISNTSEELQASQVKVVDPKKTYNSVSKIDKMARILFPILF
GTFNLVYWATYLNREPVITGAIAST
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggttaaatgttcacctctcccctcgtagcggctgtcagtcttcctcgaagggt
ccaaaggaggcggccacaagcgacaacagcacagtgttcaccaggatcctggacgggctt
cttgatggctatgactataggctgcggcctggccttggagagaacgtcacagagatcaag
acggatatttttgtcacaagctttggcccggtttctgacacagaaatggagtacaccatt
gatgtgtttttccgccagacttggaaggacgagcgcctctgcttcaaagggccaatggaa
aagttgtccttgaacaacctgctggccagcaacatttggacacccgacacattctttctc
aatggcaagaagtccatcgcccacaacatgaccacgccaaacaagctgctgaggctcatg
gatgacgggacgctgctttacactatgagactgacaatatcagccgaatgtcccatgcag
ctggaggatttccccatggacgctcacgcctgtccattgaagtttggcagctatgcctat
ccagtgtctgaggtggtttacacgtggactaaggatgcttccaagtctgtagtggtggca
gatgacgggtccagactgaaccagtaccttctgattggactaaccgctggcacggaggac
atacacacaagtagaggtcagtatacagtgatgatggctcatttctacctgaaaaggaag
attggctattttgtcatccagacatatatgccatgtttcatgactgtaatcctgtcccag
gtgtcattttggctaaatagagaatctgttcctgcacgaacagtttttggggtgaccaca
gtcctgacaatgactaccctcagcatcagtgccagaaactccctccctaaagtggcttat
gctacagcaatggactggttcattgccgtctgttacgcttttgtcttctcagccctcatc
gaatttgcaacggtgaactatttcaccaagaggagctgggcatgggatgtcaagaaagct
ctggaagcgcagcacccaaagaaacgagagcctgtggtgctgtcgaaaaagtccaacaac
atttgcttagctgccgtcaactacacgcccaacctaacaaaggacaccgcaatctccacc
atctccaacacatcagaggagctccaagcctctcaagtaaaggtggtggaccccaagaag
acctacaacagtgtcagcaagattgataagatggcccggatactgtttcccattcttttt
ggaacctttaaccttgtctactgggccacatatctgaacagggaaccagtgattactgga
gctattgcctcaacctag
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