Syngnathoides biaculeatus (alligator pipefish): 133491509
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Entry
133491509 CDS
T09681
Symbol
trpv1
Name
(RefSeq) LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
133491509 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133491509 (trpv1)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133491509 (trpv1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_5
Ion_trans
Ank_4
Motif
Other DBs
NCBI-GeneID:
133491509
NCBI-ProteinID:
XP_061658730
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Position
18:complement(4798323..4808485)
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AA seq
780 aa
AA seq
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MKKSEKPAFSLEADDRTDAEKYRAKGPKQDVLGSVLSVGHEAPKAPMDTDYQEEMEETGP
QIRFNLNFDKGIRGVAQDNTKRDSQTFDIGRLFEAAASGDVTKLEGLPQYLHRNMKKLSD
SLYQSYGKTALMKALLHLRDGKNPNVELLLDISQRMDDIKEFVNAAYTDSVYKGQTALHI
AIERRSLSYVKLLLSKGANVHAKACGKFFQPGDDGPSFYFGELPLSLAACTNQPDVVEFL
MDNAYDQAYANVADSQGNTVLHALAVVADNTEENTDLFITSMYDRILTAAARLRPEFNLE
EIENNNGLTPLQLAAKTGKSGLFAHILKREFQESHTKHLSRKFTEWVYGPVQSSLYDLAS
VDSADSNSVLEILVYGSDIPNRHEMLQTEPLRQLLEDKWKRFAGRMFCLNFLVYFVYLVI
FTAVAYNKKDGKTPFPLEHTATGYLYFSGQLLITLANCYFFLMGFLDMKRKRPNLQTLLI
DGYYDILFFVQAGLFLAAAVFYVCGRQEYLGFLVLCLALSWVNLLYFARGSKXMGIYSVM
IQKMILSDILRFLFVYVVFLFGFSAAVVTLLVEPPVKNTTAQRGRLFGPLYPDAECVKPT
FRNISYTTLQLFKFTIGMGDMEFTEHYQYKEVFYVLLIFYIILTYILLLNMLIALMNRTV
EKITMESASIWKLQRAITILDMEKRLPLCARKRLRSGVDKNLGTPSDRDHRRCFRVEEVN
WNKWNIHLGKINEEPGYWDRTRLPTSDNPPIQTNQGRSRRGFFAERRKGPQSTEMSNFPV
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcagagaaacccgccttctctctggaggccgatgaccggacagacgccgag
aaatatcgcgccaaaggaccaaaacaagatgttctaggatctgttttaagtgtgggccac
gaggcacccaaagcccccatggacacagactaccaggaggaaatggaagagactggacct
caaatacgatttaacctcaactttgacaaggggatccgaggtgtggctcaggacaacacc
aagcgagacagtcaaacattcgacatcggcagactgttcgaagccgcggccagtggggac
gtcaccaagttagaaggcctgcctcagtatctgcaccgaaacatgaagaaactctccgac
tctctgtatcagtcgtatggtaaaactgccttgatgaaggccctgctccacctcagagac
ggcaagaaccccaatgttgaattattactcgacatctcacagaggatggacgacattaaa
gagtttgtcaatgcagcgtacaccgacagtgtctacaaaggccagacggcactgcacata
gccatcgagcggaggagtctgagctacgtcaagcttctgctcagcaaaggagcaaacgtc
cacgctaaagcctgtgggaaattcttccagcccggtgacgacggccccagcttctacttt
ggtgagctacctttgtccctggcagcgtgcaccaaccagcccgacgtggtggaattcctc
atggacaacgcgtacgaccaggcgtacgcgaacgtggccgactctcagggcaacacggtg
ctgcacgccttggcggtggtggctgacaacaccgaggagaacaccgacttattcatcacc
agcatgtacgaccgcatcctgaccgccgcggcgcgactgaggcccgaattcaatctggag
gagatcgaaaacaacaacggcttgaccccgctccaactggctgccaagactggcaaaagt
gggcttttcgcacacatcctgaagcgggagtttcaggagagccacaccaaacatctgtct
cgcaaattcacagagtgggtttacggtccggtccagagctccttgtacgacctggcgtcg
gtggactcggcggacagcaattcagtcctggagatcctggtctacggcagcgatatcccc
aaccgccatgagatgctccagacggaacctctgcgccaactcctggaggacaagtggaaa
aggtttgcggggcgaatgttttgtctcaacttcctggtctactttgtgtacctggtcatc
ttcactgcagtggcctacaacaagaaggacggaaagacaccatttcctctggaacatacc
gcgacaggttacctctacttttcagggcagctcttgataacgctggcaaactgctatttc
ttccttatggggtttttagatatgaagcggaaacgaccaaatctgcagaccttgctgatt
gatggatattatgacatccttttctttgtgcaggccggcctgttcctggccgcagccgtc
ttctatgtctgtgggaggcaagagtatttgggcttcctggtgctgtgtcttgctctcagc
tgggtcaacctgctgtactttgctaggggcagtaaancaatgggcatctacagcgtcatg
atacagaagatgatcctcagcgatatcctgcgcttcctgtttgtctacgtcgtcttcctc
tttggcttctcggcagcggtggtcacactgctcgttgagccccccgtgaaaaacaccact
gctcagaggggccgcctcttcggaccactttaccccgacgccgagtgcgtcaagcccacc
ttccggaacatctcctacaccacgctgcagctcttcaagtttaccatcggcatgggcgac
atggagttcaccgagcactaccagtacaaggaagtcttctacgtgctgctcatcttttac
atcatcctcacctacatcctgctgctcaacatgctcatcgccctcatgaaccgcaccgtg
gagaagatcaccatggagagcgcgagcatctggaagcttcagagggcaatcacgatcctg
gacatggagaaaaggctcccactctgtgcgaggaagcggctccgctctggggtggacaaa
aatctgggcacgccctctgaccgagatcaccgccgctgtttcagagtggaggaagtcaac
tggaacaaatggaacatccacctgggtaaaatcaatgaggagcccggctactgggatcga
acgcgactgccgacgtcagacaacccgccgattcaaactaaccaagggaggagccggaga
ggcttctttgccgagcgcagaaaagggccgcagtccaccgaaatgagcaatttcccagtg
tga
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