Syngnathoides biaculeatus (alligator pipefish): 133491601
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Entry
133491601 CDS
T09681
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133491601 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133491601 (exosc8)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
133491601 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
133491601
NCBI-ProteinID:
XP_061658902
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All DBs
Position
18:10830856..10833509
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AA seq
274 aa
AA seq
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MAAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTTINIGSISTAEGSALVKLGNTTVIC
GVKAELANPPVEAPEKGFIVPNVDLPPLCSSQFRPGPPGEQAQAASQFMADVIESSEVLQ
MEDLCIERGKLCWSLYCDLMCLDYDGNVLDACVSALLAALKNTALPEVSFSAETGTPEVD
LEKRRGLKILKHPVAASFCVFDNSIFMADPTAEEEQLATARLTVVTDEEGHLCSVHKPGG
TSLSAEKLQELISKATIRQKEIHKLIGKVIKSIT
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggctggatttaagacggctgaacctttagaataccaccgaagctttctgaaagaa
aactgtcgaccggatggacgcgaactgtcagaattccgaaccacgaccatcaacattggg
tcgattagcacagcagaaggctcggcgctggtgaagttagggaacaccaccgtcatctgc
ggggtcaaagcggagctggccaacccgccagtcgaggcaccagaaaaaggtttcattgtg
cccaatgtggacctgccaccgctgtgctcctcacagttccgacctgggccacctggggag
caggcccaggctgccagtcagttcatggctgacgtcatcgaaagctcagaagtgttgcag
atggaggatttgtgcatcgaaagaggcaagctgtgctggtcattatactgcgacctgatg
tgtctggactacgacggcaacgtgttggacgcgtgtgtctcggccctgcttgccgccctg
aagaacactgcactcccagaggtctccttcagcgccgagaccggtacgccggaggtggac
ctggaaaagcgacgcgggttgaagattcttaagcatcccgtcgcggcctctttctgtgtc
tttgacaactccatcttcatggcggaccccacggccgaggaggagcaactggccaccgct
cgcctcactgtggtgacggacgaggaagggcatctgtgctctgtgcacaaaccaggcggg
acgtctttgtccgcggagaagctccaggagttgatcagcaaagcgacgatccggcagaaa
gaaatccataaactcatcggcaaagtcattaaaagcatcacataa
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