Syngnathoides biaculeatus (alligator pipefish): 133491611
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Entry
133491611 CDS
T09681
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133491611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133491611
03036 Chromosome and associated proteins [BR:
sbia03036
]
133491611
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
133491611
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
133491611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
133491611
NCBI-ProteinID:
XP_061658924
LinkDB
All DBs
Position
18:193439..217388
Genome browser
AA seq
1869 aa
AA seq
DB search
MTIIAFITTTNKLNVLVNKLHEYLAHSTHEDDNASVQTDEITIRNGAVGNTATPPAMEVL
VDTKFSRRKPSVVTKHSGLDESADSNDSDNVEFPFSANGHPDTTCLPKGTVLVTPEPVDN
GRDDFRGPEFSSRKSNVLRKEFSRRRGGGDHLEIVSCTACGRQVNHFQRDSLIRHPVLKV
LICKSCYKYYSSDDISKDGDGMDEQCRWCAEGGNLICCDFCSNAFCKKCILRNLGRKELS
GILESKWYCYVCNPEPLFGLVMACDSMLENMEHLWQQQRKRNRAEPEKSELYGMLPLPQI
IPLVKWDHSGMDSSVVFNYNTLNVSKDMTAKVKHLVDSANNVNTSFIHFIRTATKSKQGV
RSLYLKSYLTVVKSMRTSLAALEESLKEEFSDLGVSGCWEELLDDNFVPQPAKEADPEIA
RDGTLNQLSKVSRVYVEDEVLTDVRCTSEEVDSRLHIAKQSPHMTDLQSPQSGVSMTKKL
VVKLTPVPVEEEPCSDTPLLPVDMEEELFQAKAVSTNEETSVAKSRMSVDHPAASVQLEE
DVGNRRSPRVKTTPLRRPSDVNGKPALDTADSESDSDPEVAPSSPAPQTTEEQSLSQTRD
DSDSDEIPAALLERVAMTESTDERQSDDDDEDDDGGSQASNKVAKKRLFWLTKNTPISPE
RIRRKRKMLDRSPESDSIAKSRRERGTDTSSDEQDPQRQMQRLRTLRSFGKSHLVQSESE
GCARQKGIAEARKLKTQACQEVIETTSSSSEEGDHEDDAGSDGGDRKSKGVTDDEAFQGS
ASFQQSSGDEDQAGPTWAAGDDDDPENRIAKNILLAQINANFSSLDELSSDAETQDDESS
SEAEMEFKQVSEESGREENGGNLSSSSADADVDEPNRKRHRLLRHKLTLDEETGSDKAAS
GNRVAKADKKRVVRQPLSTDDESGETDISSSGLAELGMCEELSGSEEEEKLESPPLKVKQ
EAPPFVNRTPVTCILLSDTSSEESERDVAQGELSGSQGTPKGRKKIRKIIQDDNLRSETQ
QALREEEERCKRLASREELMEDRRETLVADQSQESVTTKLVLDQDEQTRTPLVQVHRNLV
THLKPHQVDGVQFIWDNCCESVKKTNSSPGSGCILAHCMGLGKTLQVVTFLHTVLWSQIL
HFKTALVVCPLNTVLNWVSEFNKWQKDLGQDKLKVTELATKKNLADRFRALQAWNSTGGV
MIMGYEMFRNLSLSPKVNRSDLKKALKTLLVDPGPDFVVCDEGHILRNENSNISKAMGAV
KTRRRVVLTGTPLQNNLVEYHCMVNFIKRNLLGSLGEFRNRFVNPIQNGQCADSTPKDVR
IMKRRAHVLHAMLSGCVQRRDYSELTEFLPPKYEYVVAVRLSPLQYKLYTHYLQHVSGFG
SVIGTAKVKIGANLFKDFQALSRIWTHPWCLQLSYKAKAQTLKGKKNHLVIPDMGSSPSV
SGGGASNSAADGPLPVADAASKHPRWFKDMLSPHDAKVVEHSGKLVLLFEILRMAEEWND
KVLVFSQSLISLNLIEDFLATSPQRRKDSSKAGRWIKNLDYYRLDGSTAAALRTKWANCF
NNAANARGRLFLISTRAGSLGINLVSANRVIIFDASWNPSHDIQSVYRVYRFGQVKQVFV
YRFLAQGTMEEKIYDRQVTKQSLSYRVVDRQQIERHFTLSELTELYTFEPDLSDEPQSKK
NKRKTSDLPKDPVLAILLEKCKYHIVGYHEHASLLDHKQEEELTEAERKDAWAEYQAESH
PVSAPVKIKPETLNLRTNEELVDLLNTSRAKLAASFQAVQAMSSHPLNEYMLHVGRQNPQ
LPSDRVRLKALRWKQIDTKELERRKAFYAEVLEEQRTLTLHIQSILSGRRMQEMQGAHTS
DGKPQTATN
NT seq
5610 nt
NT seq
+upstream
nt +downstream
nt
atgacgattatcgccttcattactaccacaaacaaactgaatgtattggtcaacaagctg
cacgagtacctggcccattctactcatgaagacgacaatgcctcagtccagactgatgaa
ataaccatcaggaatggtgccgtgggaaataccgctacaccgcctgcgatggaggtactc
gtggacaccaaattctccagaagaaaaccatctgttgttacaaagcattcaggcttggat
gagtctgcagactcaaacgacagcgacaacgtcgagttccccttcagtgcaaacggtcac
ccagataccacttgccttcccaaaggcactgttttggtcacacccgagcctgtagataac
ggcagagatgacttcaggggtcctgaatttagcagccggaaaagtaacgtgctgcggaaa
gaattttcgaggagacgcggaggcggtgaccatttggaaattgtcagttgcactgcctgc
ggccgccaggtcaaccatttccagagagattcccttattcgccacccagttctcaaagta
cttatctgcaagtcatgctacaaatattactcaagtgatgacatcagcaaggatggagat
gggatggatgagcagtgccgctggtgtgcagaagggggcaacctcatctgctgtgatttc
tgcagcaacgccttttgcaagaagtgcatcctgagaaatttggggcgaaaggagctctcc
ggtatcttggagagcaagtggtactgctatgtgtgtaaccccgagcccctttttggcctc
gtgatggcttgtgacagcatgctggagaacatggagcatctgtggcaacagcaacgtaag
aggaatcgagccgagccggaaaaatcggaactttacggcatgctgcctctacctcaaatc
attcccttggttaaatgggatcacagtggcatggatagcagtgttgtgttcaactacaac
actttaaatgtctcgaaggacatgaccgcaaaggtcaaacatttggtggactctgcaaac
aacgtcaacacgagctttatccattttattcgtactgcgacaaagagcaaacaaggcgtt
cgaagcctttacctgaagtcctatttgacagtggtgaagtccatgcgaacgtctctcgcg
gcacttgaggaaagcctcaaagaggaattcagcgacttgggcgtctccggctgttgggag
gaattgctcgacgataattttgtgccccaacctgctaaagaagcagatccggagatcgcc
cgcgatggaaccttgaatcagttgtcaaaggtgtcgcgtgtgtatgtcgaggatgaagtc
ctcacagatgtcaggtgcacaagtgaggaagtggactcccgtttacacattgctaaacag
agtccgcatatgacggacctgcagtctcctcaaagtggcgtcagcatgaccaaaaagctg
gtggtcaaactcacgccagtacctgtggaggaggagccctgctcagatacgccgcttctt
ccagtagacatggaagaagagctgtttcaggcgaaagccgtgtccacaaacgaagagact
tctgtcgctaaaagtagaatgagcgtagaccacccggccgcttcagtccagctggaagag
gatgtcggcaatcggcgctctccccgtgtgaaaacaacaccgttgcgccgtcccagcgac
gtcaacggtaaaccggctctggacactgcagacagcgagagcgactcggacccagaggtg
gcgccaagctcaccggccccccaaaccaccgaagagcaaagtctaagccagaccagagat
gactccgactcggatgaaatacctgcagcgcttctcgagcgagtagctatgaccgaaagc
accgatgagcgccagagtgacgacgacgacgaggacgacgatggtgggagtcaagcctcc
aacaaagtggccaagaagcgtctcttctggctcacaaagaacacaccgatctcgccggag
aggattcgtcgcaaacgtaagatgctggaccgttcacccgaatctgattccatagctaag
agtcgacgggaaagggggacggatacctcgagtgatgaacaagacccgcagcgtcaaatg
cagcgcctgaggaccctgaggtcctttggcaagtctcatctcgtccagagcgaaagcgaa
ggctgtgctcggcagaaggggatcgccgaggccagaaagctcaagactcaagcctgtcaa
gaagttatagagaccacgtcgtcgtcaagcgaggaaggcgaccacgaggatgacgccggg
agtgatggcggcgatcgcaagagcaaaggagtcacagacgacgaagcgttccaaggatca
gccagtttccagcaatcatctggcgatgaggatcaagctgggcccacctgggcagcaggg
gatgacgacgaccctgaaaatagaatcgctaagaatatacttttggcccaaatcaatgcc
aacttctcatcgctcgatgagttgtcatcagatgcggaaacacaggacgacgagtcgtcg
tctgaggctgaaatggaatttaaacaagtcagcgaagaatccggacgagaggaaaacggg
gggaacctgtcctcgtcgtctgccgacgctgacgtggatgagcccaaccggaagcggcac
cgcttgctgcgccacaaactcactttggacgaggaaacaggaagtgacaaggcggcatcg
ggaaaccgagtcgcaaaggcagacaagaagagagtcgtacgccagccgcttagcactgac
gacgagagcggagaaactgacattagctcgtcggggctggcggaacttggaatgtgcgag
gagctgagtggatccgaggaggaagagaagctcgaaagtccaccccttaaagtcaagcaa
gaagcccctccgttcgtaaaccggacacccgtgacctgcattttgctgtccgacaccagc
agtgaggagagcgagcgagacgttgcgcagggtgagctgagcggcagtcagggcacgccc
aaaggacgcaagaagatccgcaaaattatccaagacgacaatctccggtcggagacccag
caggcgctgcgagaggaggaggagcgatgcaaacgactggcaagtcgggaggagctgatg
gaggaccggcgagagacacttgtcgcggatcagtctcaagagtctgtcacgaccaagctg
gttctggatcaggatgagcagaccaggacacctctagtccaggtgcacaggaacttagtg
acccacctcaagcctcaccaagtagatggagtccagttcatctgggacaactgctgcgag
tctgtgaaaaagaccaactcctctccgggatcaggttgcatcctggcccactgtatgggc
ctggggaagactctgcaggtggttaccttcctgcacacggtgttgtggtcgcaaatccta
cattttaaaacggccttggtcgtgtgtccgctcaacaccgtcctcaactgggttagcgag
ttcaacaaatggcagaaagacttgggccaagataaactcaaggttaccgagctggccact
aaaaagaatcttgctgaccgattccgagctctgcaggcttggaacagtaccggaggtgtg
atgattatgggctacgagatgttccgaaacctctcgctatccccgaaagtgaataggagt
gacttgaagaaggcgttgaagactctactggtggatccaggtccagactttgtggtatgc
gacgaggggcacattctgcgcaacgagaactccaacatttccaaagccatgggtgccgtc
aagacgcggcggagagtcgtgctgaccggcacgccgttgcaaaacaacctcgtcgagtac
cactgcatggtcaacttcatcaaaaggaaccttctgggctcactgggggaattccgcaac
cgcttcgtcaaccccatacagaacggccagtgcgccgactccacgcccaaagatgtccgg
atcatgaagaggcgggcgcacgtcctccacgccatgctgtccggatgtgtgcaaaggagg
gattactctgagctgactgagtttctacctcccaagtacgagtacgtggtggcagttcga
ctgtcacctcttcaatataagttgtacactcactacctgcagcacgtcagtggcttcggt
agcgtgattggcaccgcaaaagtcaagatcggagcaaacctgttcaaggactttcaagcc
ctgagccgcatttggactcatccttggtgccttcaactcagctacaaagccaaagcacaa
acgctcaaaggaaagaagaatcatctcgtaattccagacatgggaagcagcccttcagtt
tccggcggtggagcgagcaacagcgccgccgacggtcccctccccgtcgccgacgccgcg
tcaaaacacccgcgctggttcaaagacatgctgtctccgcacgacgccaaggtcgtggag
cactcgggcaagttggtgctcttatttgaaatcctgaggatggccgaagagtggaacgac
aaagtacttgtgttcagtcagtctttgatctcgttgaacctgattgaggatttcctggcg
acgtctccgcagagaagaaaggactcttccaaagcgggaagatggattaaaaacttggat
tactatcgtctggatggctccaccgcggctgcgttgcggaccaaatgggcaaattgtttc
aataacgccgccaacgcacgcggtcgcttgtttctcatttcaacaagggccggctcgctg
ggcatcaacctggtgtccgccaacagagtgatcatctttgacgcctcgtggaacccatcc
cacgacattcagagcgtctacagggtctaccgcttcggccaggtcaagcaggtcttcgtg
tatcgcttcttggcgcagggcacaatggaggaaaagatctacgaccggcaggtgacaaag
cagtcgttgtcctatcgagttgtggatcggcagcagatcgagagacacttcaccctgtcg
gagctcacggaactttacacgttcgagccggacttgtcggacgagcctcagtccaagaaa
aacaagaggaaaacctcggacttgccaaaggatccggttctggcaatcctcctggagaag
tgcaaataccacatcgtcggctaccacgaacacgcgtccctgctggaccataaacaagag
gaggagctcaccgaagcagaacgcaaagacgcctgggccgagtatcaggctgagtcccac
ccagtcagcgccccagtgaaaatcaagccggaaaccttgaacttgaggaccaacgaagag
ctggtggacttgctgaacacgagcagagcgaaattagccgcctccttccaggccgtgcag
gccatgtcgtcgcaccctcttaacgaatacatgctgcatgtggggcggcagaatccccaa
ctgcccagcgaccgggtcaggttgaaggcccttcggtggaaacaaatcgacaccaaggag
ctggagcgcaggaaggctttttacgccgaagttcttgaagagcagcgaacgctgacgctg
cacatccagagcattttgagcgggcgacgcatgcaagagatgcagggggcccacacgtca
gacggaaagccgcaaacggcgacaaattaa
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