KEGG   Syngnathoides biaculeatus (alligator pipefish): 133491625
Entry
133491625         CDS       T09681                                 
Symbol
nle1
Name
(RefSeq) notchless protein homolog 1
  KO
K14855  ribosome assembly protein 4
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sbia03009]
    133491625 (nle1)
Ribosome biogenesis [BR:sbia03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    133491625 (nle1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd WDR55 DSE1_N WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_Aladin Beta-prop_SCAP ASA1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_WDR41 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_TEP1_C NBCH_WD40 CFAP251_N Beta-prop_RIG_2nd NLE Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_VPS8 PAC11 Beta-prop_DCAF12 Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_DCAF4 Beta-prop_NOL10_N TRM82_WD Ge1_WD40 Beta-prop_HPS5 Beta-prop_SPT8 RMC1_N PD40 WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_RIG_1st Beta-prop_NWD2_C PALB2_WD40
Other DBs
NCBI-GeneID: 133491625
NCBI-ProteinID: XP_061658971
LinkDB
Position
18:15808971..15822822
AA seq 477 aa
MSDEVERLLIHFQDENGKFLGSPFDVPVDITPEKLQLVCNALLQKEEAVPLAFYARGDTE
IVSSLSVCVKELAWETERVLPVMYQPQAVFRVRAVTRCTSSLQGHTEAVISTAFSPTGKY
LASGSGDTTVRFWDLMTETPHYTAKGHSHWVLSIAWSPDGKKLASGCKNSQIFLWNPVTG
TQIGKTLTGHSKWITWLCWEPLHLNAECRYLASSSKDGSVRIWDVVLGRCDKILTGHTQS
VTCVKWGGDGLLYTSSQDRTVKVWRAKDGVQCRTLQGHAHWVNTLALSTDYVLRTGAFEP
ASATVNPQDLTGSLDELKDKALQRYNNVRGSNPERLVSGSDDFTLFLWNPAEDKKPLARM
TGHSALVNEVLFSPDTRLLASASFDKSVKIWDGRTGKYLMSLRGHVGSVYQVAWSADSRL
LVSGSSDSTLKVWDVKSGKLNMDLPGHADEVFAVDWSPDGQRVASGGKDKCLRIWRR
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagtgatgaggtggagcggctgctcatccatttccaggacgagaatgggaagtttctt
ggttcccctttcgatgttcccgtcgacatcactcctgagaaactacagctggtctgcaat
gcattgctgcaaaaggaggaggctgtgccgctggcgttttacgcccgtggcgataccgag
attgtgtccagcttgagtgtctgcgtcaaagagctggcatgggagaccgagcgggtgctg
ccagtgatgtatcagccccaggccgtgttccgggtccgagctgtcacccgctgcaccagc
agtctccaggggcatactgaagccgtcatctccaccgctttcagtcccactggaaaatat
ttggccagcgggtcaggtgacaccacggtgcgcttttgggacttgatgaccgagacgccg
cattacaccgccaaagggcactcacattgggttctcagcatcgcctggtcacctgatggc
aagaaacttgcatcaggatgcaaaaacagtcagatctttctgtggaatccagtgacaggc
acacaaattgggaagaccctgaccggacacagtaaatggatcacctggctttgctgggaa
cctctccacctcaatgccgagtgccgctacttggcgagcagctccaaagatgggtcggtg
cgcatctgggacgtggtactcggccgctgcgacaagatcctgacgggccacacgcagtcg
gtcacttgcgtcaagtggggcggcgatggactcctgtacacctcatcgcaggacaggacc
gtgaaagtgtggcgggccaaagacggtgtccagtgcaggacgctgcagggtcacgctcat
tgggtcaacacgttggctctcagcaccgactacgtgctaaggacaggcgcctttgaaccg
gcaagcgccaccgtcaacccacaggacctcaccggatcactggacgaactaaaggacaaa
gccttgcagagatacaataatgttcggggttccaacccggaacgcttggtgtcaggctct
gacgacttcaccttgttcctgtggaacccggctgaggacaagaagcctctggcccggatg
acgggccacagcgctctggtcaacgaggtgcttttctcccctgacacccggctgctggcc
tcggcttccttcgacaagtcggtcaaaatctgggacggccgcactggaaaatacttgatg
tctctccgtggccacgtgggctccgtgtatcaggtggcctggtcagccgacagccggctg
ctcgtgagcggcagcagtgacagcacgctcaaagtttgggatgtcaagagcgggaagctc
aacatggatcttcccggtcacgcagatgaggtgtttgctgtggactggagtcctgacgga
caacgagtggccagtggcggtaaagacaaatgcctccgaatatggagacgataa

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