Syngnathoides biaculeatus (alligator pipefish): 133491643
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Entry
133491643 CDS
T09681
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
133491643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133491643
Transporters [BR:
sbia02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
133491643
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
133491643
NCBI-ProteinID:
XP_061659018
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Position
18:complement(17530316..17543426)
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AA seq
599 aa
AA seq
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MFLKEDDCTCDVFVPNERQKKFRETEARGYWATKAEFILTVMGGIIGPGNVWRFPYLCYK
NGGGVFFIPYVLFMVTCGIPLFFLETAMGQYTNQGGITCWKKFCPLFQGIGYASHLIIAF
GASSYITIIAWAFFYLFYSFSVDLPWATCGNDWNTDSCMEFRVANESLAVTHRQNTTLPV
VEFWERRVLKISGSIDEVGSLRWELVLCLILAWVICYFCIWKGIKSTGKAAYFTATFPFA
MLLVLLIRGVTLPGAMDGIIYYIYPDVSRLADPQVWLDAGTQIFFSYAIGFGFLTSLGSY
NTYNNNCYTDCFYLCLLNSGTSVVAGFAIFSVLGFMTYEQGVDIAEVAKSGPGLAFIVYP
RAVAMMPMPQVWAVCFFLMIILLGLDSQFVGLECLMTSLVDLYPAFLRQGYRRELVLLAI
CSISCLLGLSLVTEGGMYLLQLVDFYICSGMTLLLLSIFQSVSIAWIYGAERFYGNITDM
IGYRPSPLMKLCWCYFTPCLCFGTFVFSIVRYSPLKFSSTYVYPLWANILGWFLSTISLS
LIPLFMFYKLAQGEGTLRQRFLLLCLPEDDLKCLPPLEDNVATPLTEPKPLSHAEEVTK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtttttaaaggaggatgattgcacttgtgatgtttttgtacccaacgagaggcaaaag
aagttccgagaaacagaagcacggggatactgggccaccaaagccgagttcatcctcact
gtgatgggcggcatcattggaccgggcaacgtgtggagatttccttatttgtgctacaaa
aacggcggaggtgtcttcttcattccttacgttttgttcatggtcacttgcggaatcccc
ttgttttttctcgagaccgcaatgggacagtacaccaaccagggggggattacgtgttgg
aagaagttttgcccactttttcaaggcatcggctacgccagtcaccttatcattgccttc
ggcgcctcgtcctacattacaatcatcgcgtgggcgttcttttatttgttctactccttc
agcgtcgacttgccatgggccacgtgcggaaacgactggaacacagactcatgcatggag
ttcagggttgcaaatgagagcctcgctgtgacacaccggcagaacaccactctgcctgtt
gtagagttctgggagcgccgagtgctgaagatctctggtagtattgatgaggtggggagc
ttgaggtgggagcttgtcttgtgtctcatcctggcatgggtcatctgctacttttgcatt
tggaaggggatcaaatccactgggaaggcagcctacttcacggcaactttccccttcgca
atgctgctggttttgctcatacgtggtgtgacgctgcccggggcaatggacgggattatt
tattacatctaccctgacgtatcccggctagcagatccgcaggtgtggttggatgcgggc
acgcagatcttcttctcttatgcaatcggcttcgggttcctgacctctcttggcagttac
aatacctacaacaacaactgttacacggattgtttctacctgtgcttgctgaacagtggc
accagcgttgtggcaggctttgccattttctccgtcttgggatttatgacctatgaacaa
ggtgttgatattgcagaggtggctaaatcaggtccaggcctggccttcatcgtttaccca
cgtgctgtagccatgatgcccatgccgcaggtgtgggccgtgtgtttcttcctcatgatc
attctactgggcttggatagtcagtttgttggtctggagtgtctgatgacgtcgctggtc
gatctttacccagctttcctacgtcaaggctacagacgcgagctggtcctgctggccatc
tgcagtatttcttgtttgctgggactttccttggtgactgagggagggatgtacctgctc
caactggtggatttctacatttgcagcgggatgaccttgctcctgctgtccatcttccag
tctgtcagcattgcctggatctatggagccgagcgtttctatgggaacatcacagatatg
attggttaccgtccctctccactaatgaagctctgttggtgctattttactccgtgttta
tgttttggcaccttcgtcttctccatagtcagatactctcccttgaaattcagtagcact
tatgtttatccactatgggccaacattctgggctggttcttgtccaccatctccctctcc
ctcatccctctctttatgttctacaaactagcgcagggagaggggacccttcgtcagcga
tttctcttgctgtgccttcctgaagacgacctgaaatgtcttcctccgctggaagacaat
gtcgccactcctctcactgagcccaaacctttgtcccatgctgaggaagtcactaagtga
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