Syngnathoides biaculeatus (alligator pipefish): 133491718
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Entry
133491718 CDS
T09681
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6 isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133491718 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133491718 (taf6)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133491718 (taf6)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133491718 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
133491718 (taf6)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
133491718 (taf6)
STAGA complex
133491718 (taf6)
TFTC complex
133491718 (taf6)
SAGA complex
133491718 (taf6)
SLIK complex
133491718 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
Bromo_TP
CENP-S
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
133491718
NCBI-ProteinID:
XP_061659225
LinkDB
All DBs
Position
18:complement(5159393..5167279)
Genome browser
AA seq
663 aa
AA seq
DB search
MHISIVSAHIRGSYRLPPKRRTLYAVMAEERRQKPCSVVLPTESMKAMAESVGVGQLQED
SCTALSEEVSYRIKEITQDALKFMHHGKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPF
RFASGGGRELHFYEEKEVDLSDIINTPLPRVPLDVSLKAHWLSIEGIQPSIPENPPPAPK
EQQKAESTEPLKVVKPGQEEVGAIQGKNQGTTAADSKGKEKGPIRLKPRSTHELSVEQQL
YYKEITEACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYL
MRMVKALMDNPTLYLEKYLHELIPAVVTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCK
TFSTTTNNIQSRITKTFTKSWLDDKTQWTTRYGCIAGLAELGPDVIKTLILPRLTVEGAR
IKAVIEGPVISNIDKIGADHVQSLLLKHCASVIAKIRPPPDNVEQYRIDYGYLAPMLCSH
VIKARTQAAMQAQQVNRTTLTITQPRPTLSVSQSGLSGSTGPRTPSIIKVPSSLTLMSPR
PGTPSQPSPPATKYIVMGTSAGASSTQQQVITINSSQSASTVTSTVPSASSTLQPLVKLD
PGSGPALPGSRPMQKYIVVSLPSSASSIENKSSAIPTPISTTLEPMVKTDRAESPCVSTQ
SPH
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcacatttcaatagtaagtgctcatattcgtggaagttaccgcttaccccctaaaagg
aggacgctttacgcagtgatggcggaggaaaggcgtcaaaagccgtgttcagtggtcctc
cctacagagtccatgaaggcgatggcagagtctgtgggagtaggccagttacaggaggac
agctgcacagccctaagtgaagaagtcagctacagaattaaagaaattacacaggatgct
cttaaatttatgcatcacgggaagagacgtaaactaactaccagtgatattgataatgcc
ctcaagcttaaaaatgtagagcccctgtacggattccagtcccaagagtttatccctttt
cgttttgcaagtggtggtggaagagagctccatttctacgaggagaaagaagtggatctt
agtgatattataaacacaccacttcccagagttcctttggatgtgtctcttaaagcccac
tggttaagtattgaggggattcaaccttctattccggaaaatccaccaccagcgccaaaa
gaacaacaaaaggctgaatccactgagcccctcaaagttgtcaaacctggtcaggaggag
gtcggggccattcaaggcaaaaaccaggggacgacggctgctgatagtaaaggaaaggag
aagggtcccataaggttgaaacctcgcagtacacatgaactttctgtggaacagcagctg
tactacaaggaaattactgaagcatgcgtcggatcctgtgaggccaagagagctgaagct
ttgcaaagtattgccacagacccgggactgtatcagatgctaccaagattcagcaccttt
atttctgaaggagttcgtgttaatgtagttcaaaacaacttagctctcctgatttacctc
atgcggatggtcaaagcactgatggacaatcccactttatacctggaaaaatatctacac
gagctcatcccagctgtggtcacgtgcatagtcagcaagcagctgtgtttgaggccagat
gtggacaaccactgggctttgcgtgactttgccgctcgcctcatggcacaaagttgtaaa
accttcagcaccacgaccaacaacatccagtcgcgcatcaccaagacatttacaaagagt
tggttggatgacaaaacccagtggacaacgagatacggctgcattgccggacttgccgaa
ctgggacctgatgtgataaagacgttgatccttcctcggcttactgtagagggcgctcgc
atcaaagcagtgatcgaaggacccgtgatctccaacattgataaaattggagcggaccat
gttcaaagcctcctactcaaacactgtgccagtgtcattgccaagattcggcctccacct
gacaacgtggaacaatatcgaatagattatggttacctcgcccccatgctgtgctcccat
gtaataaaggctagaacccaagccgcaatgcaagcccagcaagtcaacagaaccacgtta
acaatcacacagccacgtccgacactctctgtctcacaaagtggactcagtggatcaaca
gggcctcgcactcccagcattattaaggttccaagttccctcaccctgatgtcgccgaga
ccagggaccccatcgcagccgtcgccacctgccactaaatacatcgtcatgggaaccagt
gcaggagcctcctcaacacagcagcaggtaatcaccatcaactcttcccagtctgcctca
acggttacgagcaccgtccccagtgcttcttcaaccttgcaacccttggtgaaactggat
ccaggcagtggccctgcgcttcctggttcccgccccatgcagaagtatattgtggtgtcg
ctaccctcgtccgcctcttccatagagaataaaagctctgcaatcccaacccctatctca
accacactagaaccaatggtgaagacagaccgagcagagtctccgtgtgtgagcacacag
tcaccacactga
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