Syngnathoides biaculeatus (alligator pipefish): 133491760
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Entry
133491760 CDS
T09681
Name
(RefSeq) cell adhesion molecule DSCAML1-like isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133491760
Cell adhesion molecules [BR:
sbia04515
]
Immunoglobulin superfamily
DSCAM family
133491760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Pur_ac_phosph_N
C1-set
C2-set_3
Ig_6
ChitinaseA_N
DUF6034
DUF1461
Motif
Other DBs
NCBI-GeneID:
133491760
NCBI-ProteinID:
XP_061659311
LinkDB
All DBs
Position
18:322781..363474
Genome browser
AA seq
2041 aa
AA seq
DB search
MWLVTLLLLYSLQEVHSEDAASTRLYFANASLQRVTYSSSVGVSLPCPAGGTPSAVLRWY
LATGDDIYDVPHIRHVYANGTLQLYPFSPSAYNSYIHDNDYFCTAENQAGKIRSPNIRIK
AVFREPYTVRVADQRSMRGNVAVFKCLIPTAVQEYVSVVSWERDTVSIVPGNRFSLTSFG
ALYISDVQKEDALSTYRCITRHKYSGETRQSNGARLSVMDPNESSPSILDSFQGGEVYAG
QSIELPCIAGGYPVPTVRWLKDGRPLPSDARWTRRLTGLTISDLRQEDSGNYACEVTNSF
GSKDVSGQLHIIDPLRVTLSPKNLKTGISSTLFFTCTVEGSPEYSINWYRNAEAILPDQH
ISIQGQHNDTLQITAAQKFHSGAYQCFASRKGHTSQDFSIILLEDGTPRIVTSFSERVVN
PGEPFSLVCEAKGAPPPSITWTLDDEPVVRDSTYKTGQYTQSDGLTVSHVNVSSPLIRDG
GVYRCVARNSAGSAEYQARINVRGPPRIRPMRDMTAVAGRNTYITCRVIGYPYYSIKWLK
DGMQLPDNHRQVLFDNGTLRLTDVQKGADEGTYLCSVLIQPQVSINQTVHVAVKVPPLIQ
PFDIPSTSVGKLIYIACVVSSGDMPIRITWHKDGQLIVPGPTSGVAIETKDFMSSLQISK
VTLKHNGNYTCIASNAAATVSWERQLIVTVPPGFVVQPNNQDCIYGKAGVLNCSVEGYPP
PKVMWKHAKGVGNPQQYHPVPLTGRIQIMSNGSLLIRHVLEDDRGYYLCQASNGVGSDIS
KSMILTVKIPAMITSHPNTTMARKGQTKELNCTARGEQPIIIRWERGDTVIDAERNPRYS
IGINKKGDEVISTLKLKPADRGDSVFFSCHAINSYGEGRGLIQLTVQEPPDPPELEVREV
KDRSMNLRWIQRFDGNSIITSYDIEYKNKSDSWDHMYTTRNISPTNNQANIVELHPACVY
SIRMYSYNKIGRSLPSKELTISTEEAPPDGPPMDVILQPMTSQSIRVTWRAPKKELQNGV
IRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSS
TEINATTLEDVPSRPPQNVRAISVTSDQAVITWAEPPRLTLHGVLKGYRVVFWSLFPDGG
GCCGGPARWPTQKWGEMQNITSTREQVELRGLDKFTNYSVQVLAYTQAGDGVRSDVLYIQ
TREDLPGPPAGIKAVPSSLSSVVVSWLPPHKPNGVIRKYTIYCSSPGSGQPAPSEYEANP
ETLFYHITHLSRGKQYHIWAAAVTTAGRGNVSSKVTVEPAGKVPAKILSFGGTVTTPWMK
EVRLPCKSVGEPAPSAKWTKDSEDSAAPVTADGQRQILPNGTLALRSVKAEDSGYYTCTA
TNTLGFDTIVVNLVVQVPPDQPRLTVSTTSTSSITLAWIPGDNGGSSIRGFVLQYSVDNT
EEWRDVFISSSERSFRLDNLRCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPVFSKDQ
PLLTHINSTHAGLNLQGWTSGGCPITDVMLDFRPKGTWAWQSLKANSSAQLFLGELQEAT
WYELKMKACNSAGCGNQSSQFATTDYDGSTIPPIKSARGQRDDVKKLFSIGSPVILLTIG
VALLFVVRKKRKEKRLKRLRDAKSLAEMLISKNNRSIDTPVKGPPQGPRLHIDIPRVQLL
IEDKEGIKQIGEDKAAVPVTDTEFSQSVNPQNFCTGVSLHHQALIQNSGPLIDMSDIRPG
TNPVSRKSIKSAHSSRNRYSSQWTLSRPSQSQSTASARTLTSDWRTMGSHAVAAAESDSY
SASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAKFTITECFISDSSSDQ
MTTGTNDPADSMTSLSTPSEPGICRFTASPPKPQDYDRGKNVAVPIPHRANKSEFCNLPL
YMKTDPFLRKQGELHDPCPAVPPREASVRGLTQRAYHTQGRHKTLDSGKQQALTLGHSGL
GGSGTATLPQRTLAVPGSGSGSAIGGKMGGSRDSLLEGSSSALGRLQKQSAGAYSKSYTL
V
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atgtggcttgtaactttgctcctgctgtactctctccaagaagtacacagtgaggacgcg
gcctccaccaggctgtactttgccaacgcctcgctacagagggtgacctactccagctcg
gtgggggtgtccctaccctgtccagcagggggcaccccgagcgccgtcctccgctggtac
ctggccaccggcgacgacatctacgacgtgccccacatccgtcacgtgtacgccaacggc
accttgcagctgtatcccttctcgccctccgcctacaacagctacatccatgacaacgac
tacttctgcaccgccgagaaccaggcgggcaaaatccgcagccccaacatccgcatcaaa
gccgttttcagggagccgtacacggtgcgcgtggcggaccagcgctccatgcggggcaac
gtcgccgtgttcaagtgcctcatccccacagccgtgcaggagtacgtcagcgtggtctcc
tgggagagggacaccgtctccatcgtcccaggcaacaggttctcgctgacctcttttggg
gctctctacatctcggatgtccagaaggaggacgccctctccacgtaccgctgcatcacc
aggcacaaatacagcggcgagacgcgccagagcaacggcgctcggctctccgtgatggac
cccaacgagtcctcacccagcatcctggacagtttccaaggaggcgaggtgtacgcgggc
cagagtatcgagctcccctgcatagcgggcggttaccccgtccccacggtgcgttggctg
aaggacgggcgcccgctgccctcggacgcccgctggacgcgacgcttaacggggctgacc
atcagcgacctgcgacaggaagacagcggcaactacgcctgcgaagtcaccaacagcttt
ggctccaaggatgtttctggacagcttcacataatagatccgcttcgagtgaccttatcg
cccaagaatctgaaaaccggaatcagcagcacgctcttcttcacgtgcactgtggaaggt
tctccggaatacagcatcaactggtaccgcaacgcggaagccatcttgcccgaccagcac
atctccatccagggccagcacaacgacacgctgcagatcaccgcggcgcagaagttccac
tcgggggcctaccagtgcttcgcttcccgcaaaggccacacctctcaggacttctccatc
attctgctcgaggacggcacccctcgcatcgtgacgtccttcagcgagcgggtggtgaac
ccgggcgagcccttctccctggtgtgcgaggccaaaggcgcgccgccgccctccatcacc
tggacgctggacgacgagcccgtggtgcgagactccacctacaagacgggccagtacacg
cagtccgacggcctgaccgtgtcccacgtcaacgtcagcagcccgctcatccgggacggc
ggagtttaccgttgcgtcgcacgcaactcggccggcagcgctgagtaccaagcgcgcata
aacgtaagaggtccgccccgaatcagacccatgcgggacatgacggcggtggcgggcagg
aacacgtacataacgtgccgggtcatcggctacccctactactccatcaagtggctgaag
gacggcatgcagctgcccgataatcaccggcaagtcttgtttgacaacggcacccttcgg
ctgacggacgtgcagaagggcgccgatgagggcacctacctctgtagcgttctgatccaa
ccccaggtctccatcaaccagactgtgcacgtagcggtcaaagtgccgcctctcatccag
cccttcgacatcccctccacgtcggtagggaagctcatctacatcgcctgcgtggtgtca
tccggcgacatgcccatccgcatcacctggcacaaggacggccagctcatcgtgccgggc
cccacgtccggcgttgccatcgagaccaaagacttcatgagctccctccaaatctccaag
gtgacgctgaaacacaacgggaactacacctgcatcgccagcaacgccgccgccaccgtc
agctgggagcgacagttaatcgttaccgtgccaccgggattcgtggtgcagcccaacaac
caggactgcatctacggcaaagccggagttctcaactgctccgtggagggttacccgcct
cccaaggtcatgtggaaacacgccaaaggtgtgggcaacccccagcagtaccacccggtc
ccgctgaccggtcgcatccagatcatgtcgaacgggtcgctgctcatccgccacgtgctg
gaggacgaccgcggctactacctttgtcaggcctccaacggggtgggctcggacatcagt
aagagcatgatcctcaccgtcaagatccccgcaatgatcaccagccaccccaacaccacc
atggccaggaagggccagaccaaggagttgaactgcaccgctcgaggcgagcagcccatc
atcatccgctgggaacggggggacacggtcatcgacgccgagaggaacccccgttattcc
atcggcatcaacaagaagggcgacgaagtcatctccaccctcaagctgaagccggcggac
agaggagattccgtcttcttctcttgtcacgccatcaactcttacggggaaggccgagga
ctcatccaactcactgtgcaagaacctcctgatcctccagagctggaagtgagggaggtg
aaagaccggagcatgaacctgcgctggatccaaaggtttgacggcaacagtatcatcacg
agctacgacatcgagtacaagaacaagtcggactcctgggaccacatgtacacgaccagg
aacatctcgcccaccaacaaccaagccaacattgtggagttgcacccggcttgcgtgtac
agcatccgcatgtattcctataacaagatcggtcgcagccttcccagcaaagagctgaca
atcagtacggaagaagcgccgcctgacgggccgccaatggatgtgattcttcagccgatg
acgtcgcagagcattcgggtcacatggagggcgccgaagaaggagctgcagaacggcgtc
atccgtggctaccagatcggctacagagaaaacggaccgggcagcaacggccagtacagc
atcgtggagatgaaggcgaccggagacagcgaagtctacactctggacaacctcaagaag
tttgcccagtacggggtggtggtccaggccttcaacagagccgggaccggcccttcgagt
acggagatcaacgcaaccacactggaagatgtgcccagccgaccgccgcagaacgtgcga
gccatttcggtcacatcggaccaggcggtgatcacgtgggcggagcctccgcggctgacg
ctgcacggtgtgctgaaaggctaccgcgtggtgttttggtccctcttccccgacggaggt
gggtgctgcgggggcccggcccgatggccgacgcagaagtggggagagatgcagaatatc
accagcacccgagagcaagttgagctgcgaggattggacaagttcaccaattacagcgtt
caagtgctggcgtacacgcaggccggcgacggcgtccgcagcgacgttctctacatccaa
actcgtgaagatcttcctggtccgccggctggcatcaaggcggttccttcctccctcagt
agcgtggtggtgtcctggttgcctccccacaaacccaacggcgtcatccgcaagtacacc
atctactgctccagccccggttctggacagccggctcccagcgagtacgaagccaacccg
gagacgctcttctaccacatcacgcacctgagccggggcaagcagtaccacatctgggcc
gccgccgtgaccacggccggccggggcaacgtcagctcaaaggtcacggtggagcccgcc
gggaaagtgccggccaaaattttgtccttcgggggcaccgtcaccaccccctggatgaag
gaagtacgtctgccctgcaagtcggtgggggaaccggccccgagcgccaagtggaccaaa
gacagcgaggactcggccgctccggtgacggccgacggccagcggcagatcttacccaac
ggcactctggcgctgcgctcggtcaaagccgaagattcgggctactacacgtgcacggcc
accaacactctgggtttcgacacgatcgtggtcaatctggtcgtgcaagttcctccggat
caaccccgcctgacggtctccaccacgtccacctcctccatcactctggcttggatccca
ggggacaacggcggaagttccatcagaggtttcgtgctccagtattcggtggacaacacg
gaggagtggcgagacgttttcatcagctccagcgagcgttccttcaggttggacaatctg
cgctgcggaacgtggtacaaggtcaagctggcggcgaagaacagcgtgggctcggggcgc
atcagcgagatcatcgaagccaaaacgcacggcagagaacccgtcttcagcaaggaccag
ccgctcctcacccacatcaactccacgcacgccggcctcaacctgcagggttggaccagc
ggcggctgccccatcaccgacgtgatgctggacttcaggcccaaaggcacttgggcctgg
cagagcctgaaggccaactccagcgcgcagctcttcctcggcgagctgcaggaggccacc
tggtacgagctcaaaatgaaggcctgcaacagcgccggctgcggcaaccagagctcccag
tttgccaccaccgattacgacggaagtaccatcccgcccatcaagtcggcccgagggcag
cgcgacgacgtgaaaaagttgttttccatcggctctcccgtcattctgctcaccatcgga
gtcgctttgctcttcgtcgtccgcaagaaacgcaaggagaagcggctgaagcgacttcga
gacgcgaagagcctcgctgagatgctcatcagtaagaacaaccgcagcatcgacacccct
gtgaagggccccccccagggcccacgactccacattgacattcctcgagttcagttgctc
attgaggacaaggaaggcatcaaacaaatcggagaggacaaggccgcggtcccggtgacc
gacaccgaattcagccaatccgtcaacccgcagaacttctgcacgggcgtctctcttcac
caccaagccctcatccagaactccggacctttgatcgacatgtcggacatccgacccggc
accaatccggtttccagaaagagcatcaagtcggcccacagctccagaaaccgctactcc
agccagtggacgctgagccgacccagtcagagccagtcgacggcctcggcgcggactctg
acctcggactggcggaccatgggctctcacgccgtcgccgccgccgagagcgacagctac
agcgccagcctctcgcaggacacggataaaggtcgcaacagcatggtgtcgacggaaagc
gcctcgtccacctacgaggagctggcgagggcgtacgagcacgccaagctggaggagcac
ttgcagcacgccaagttcaccatcaccgagtgcttcatctccgacagctcctccgaccaa
atgaccaccggcaccaacgacccggcggacagcatgacctccctcagcacgccgtccgag
ccgggcatctgtcgcttcaccgcctcgccgcccaagccgcaggactacgaccgtggtaaa
aacgtggccgtgcccatccctcatcgcgccaacaaaagtgaattctgcaacctccccctt
tacatgaagaccgacccgttcctccgcaagcagggggagctgcacgacccctgcccggcc
gtccccccgcgggaggcgtccgtccgcggcctgacgcaacgcgcgtaccacacgcagggc
cgccacaagacgttagactctggcaagcagcaggcgctgacgctgggccactccggactg
ggcggctcgggcacggccaccttgccccagaggactctcgccgtgcccggctccggctcc
ggctccgcgatcggcggcaagatgggcggctccagagactcgctgctggagggcagctcc
tcggcgctgggccggctgcagaaacagagcgcgggggcttactccaagtcgtacacgctg
gtctaa
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