Syngnathoides biaculeatus (alligator pipefish): 133491761
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Entry
133491761 CDS
T09681
Symbol
ncam1a
Name
(RefSeq) neural cell adhesion molecule 1a isoform X1
KO
K06491
neural cell adhesion molecule
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sbia04514
Cell adhesion molecule (CAM) interaction
sbia04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
133491761 (ncam1a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133491761 (ncam1a)
04517 IgSF CAM signaling
133491761 (ncam1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133491761 (ncam1a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133491761 (ncam1a)
04090 CD molecules [BR:
sbia04090
]
133491761 (ncam1a)
00536 Glycosaminoglycan binding proteins [BR:
sbia00536
]
133491761 (ncam1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sbia00537
]
133491761 (ncam1a)
04091 Lectins [BR:
sbia04091
]
133491761 (ncam1a)
Membrane trafficking [BR:
sbia04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
133491761 (ncam1a)
Cell adhesion molecules [BR:
sbia04515
]
Immunoglobulin superfamily
NCAM1/2
133491761 (ncam1a)
CD molecules [BR:
sbia04090
]
Proteins
133491761 (ncam1a)
Glycosaminoglycan binding proteins [BR:
sbia00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
133491761 (ncam1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sbia00537
]
Others
133491761 (ncam1a)
Lectins [BR:
sbia04091
]
I-type lectins (Siglecs)
133491761 (ncam1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
FN3_DSCAM-DSCAML_C
V-set
Ig_5
V-set_CD47
C2-set_2
Ig_6
Pur_ac_phosph_N
C2-set_3
Ig_PDGFR_d4
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
133491761
NCBI-ProteinID:
XP_061659315
LinkDB
All DBs
Position
18:complement(13395728..13614060)
Genome browser
AA seq
833 aa
AA seq
DB search
MLQIRDVLWGFLYIACAAAIQVQVTPTHREISVGESKFFLCEVVGDAKDIDWFAPNGEKI
LPNNPNIQVSRNDETTSTLTIYHADVDHAGIYKCVAKNGDKEAQATVQVKIFQKITFKNV
PSPQEFNEGDDADIICDVVGSPVPFILWKHKGVRIQPNKDVRYNVMENGHLLIRGIKKTD
EGPYICEARVMETGEINFKMIDVVVNVLPTIRARQSEVNATADMGGSTLLACDADGFPEP
SVTWTYNNVILESGDKYSLNEDGSELVIKDVVKVDEGDYTCTARNKAGEMSQEVSLNVFV
QAKITYLNNQTATEFDKEVTLTCEASGDPTPSISWSFQNRMFSEGEQSHDRNIVVRSHAR
VSSLLLKNVDFTYAGQYLCSASNSIGQDTQPVYLEVRYAPKIMGVVTVYTWEGNPANISC
EVEAHPGASVTWFRDGLQVPSDNTTNLKLYSTPRISYLEVFPESQSDFGSYNCTASNVMG
IESKEFLLIQAEVPSSPKIQRLEPFSSSAVVEFDEPDSSGGVPIIKYLVEWRLDGQDWTG
KEYDANEDLMSITIHNLIPNTNYEVKMSAINGKGEGESSAAVKFKTGPIREPSAPKLEAM
VQNQGNALKVNWIKQDDGGSPIKHYLVRYKAKHVSDWKPEIRMPRGSEYIVLSGLDWNTE
YEIRIVAVNQKGKSEAGILSFTTATEPTTMPGASGSGLSTGAIVGILIVVFFVLLVAVDL
TCYFLNKCGLLMCIAVNFCGKAGPGAKTKDIEEGKAAFTKDESKEPIVEVRTEEEPTHNQ
EGVVATEPNETTPLTEPDGMTKDDVKMDANNTAAEVKTVPNEAAQTNGNESKA
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaataagggacgtcctctggggattcctctacattgcctgcgcagctgccatc
caggtgcaggtgactccaacacacagagagatcagcgtgggagagtccaagtttttcctc
tgcgaagtggtgggagatgcgaaagacattgactggttcgcgcccaacggggaaaagatc
ctgccaaacaaccccaacatccaagtgagccgcaacgatgaaactacctccacgttaacc
atctaccacgccgacgtcgaccacgccggcatctataaatgcgtggcgaagaacggcgac
aaggaggctcaggccacggtccaagtcaagatcttccaaaagatcaccttcaagaatgtt
cccagcccgcaggagttcaacgagggcgatgacgccgacatcatctgcgacgtggtcggg
tcgccggtgcctttcatcctttggaagcataaaggggtcaggatccagcccaacaaagat
gtgcgatacaacgtgatggagaacggccacctgctgatccgcggcatcaagaagaccgac
gagggaccgtacatctgcgaggcgcgcgtcatggagacgggagagatcaatttcaaaatg
atcgacgttgtcgtgaacgtccttcccaccattcgcgccaggcagtccgaggtcaacgcc
acggccgacatgggcggctccaccctcttggcctgcgacgccgacggcttccccgaaccc
agcgtcacatggacctacaacaacgtcattcttgagtcaggcgataagtacagtctgaat
gaggacggctccgagctggtgataaaagatgtcgtcaaagtggatgagggagattacacc
tgcacagccaggaacaaagcaggcgagatgagccaggaagtcagtctcaatgtgttcgtg
caagctaagatcacttacctgaacaaccagacggcgaccgagttcgacaaggaagtcacc
cttacctgcgaggcctcgggtgacccgacgccctccatctcctggagtttccaaaacagg
atgttctccgaaggcgagcagagccacgacagaaacatcgtggtacggagtcacgcccgg
gtttcatccctgctcttgaaaaacgttgacttcacgtacgccggacagtacttgtgcagc
gccagcaactccattggtcaggacacccagcccgtgtacctggaagttcgctatgctcca
aagattatgggagtggtgacggtgtacacttgggagggaaacccggccaacatcagctgc
gaggtggaggcccaccccggggcttccgtcacctggttccgagacggcctccaggtaccc
tctgacaacaccaccaatctgaagctctatagcacgccgcgcatcagctacttggaggtt
ttccctgaatctcagagtgactttggaagctacaactgcacagcgagcaatgtgatgggt
atcgagtccaaggagtttctcctcatccaagcagaggtgccctcgtcgccaaagatccaa
cgactggagccgttctccagctcagctgtggtggagtttgacgagccggactcttccgga
ggagtgcccattatcaagtatctggtggaatggcgcttggacggccaggactggactgga
aaggaatacgacgccaatgaagacttgatgagcatcaccattcacaacctcataccaaac
accaactacgaggtcaaaatgtccgccatcaatggcaaaggagaaggcgagagcagcgcg
gccgtcaagttcaagaccggaccaatccgggaacccagcgccccgaaattggaggccatg
gtccaaaatcagggcaacgctcttaaggtcaactggatcaagcaggacgacggcggctcc
ccgatcaagcactacctggtccgatacaaggctaagcatgtgtccgactggaaacccgag
atccgcatgccgcgcggcagcgagtacatagtgctgagcgggctggactggaatacggag
tacgagatccgtatcgtggccgtgaaccagaagggcaagtccgaggccggcattctgtcg
ttcacaacggccacagaacccaccaccatgccaggcgcgtccgggtcgggcctgagcaca
ggcgccatcgtgggcattctcatcgtggtcttctttgtgctgctggtggccgtcgacctc
acctgctacttcctcaacaagtgcggccttctcatgtgcatcgccgtcaacttctgcggg
aaggccggcccgggcgccaagaccaaggacatcgaggagggcaaggccgccttcacgaag
gatgagtccaaggagcccatcgtggaggtgaggacggaggaggagccaacgcacaaccag
gagggagtcgtagccacggagcccaacgagaccacgcctctgacggaacctgacgggatg
accaaggacgacgtcaagatggacgccaacaacaccgcggccgaggtgaagacggtcccc
aacgaggcggcgcagaccaacggcaatgagagcaaagcgtaa
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