Syngnathoides biaculeatus (alligator pipefish): 133491779
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Entry
133491779 CDS
T09681
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04517
IgSF CAM signaling
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133491779 (sptbn4a)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133491779 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133491779 (sptbn4a)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133491779 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
133491779 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
133491779
NCBI-ProteinID:
XP_061659350
LinkDB
All DBs
Position
18:complement(1704749..1766773)
Genome browser
AA seq
1516 aa
AA seq
DB search
MLMARDTARDEAQKLHRKWLKHQAFMAELARNKEWLAKIEQEGQGLIQEKPELRTVVQQK
LEEIRECWSDLETTTKAKARQLFENNKPEPAVKSYSDLDNQLSHLERQPPQLEQAHHLPT
FNEQLQKFQAMESRFGDIYKDVEELGSLQGGGLSQRGLMAGDKEGGEQSGLAETRIVRLI
EPLKERRRILLASKEMHQVAQDLEDEMLWIQERLPQASCKEYGSNLQSVQQNVKKKLTLQ
RELAGRRARVEEVLDRAGIIASLRTPEVEFVRDGAGHVRQLWEVLQLELERRSVMLDAAL
QAQQYYSEATKVESWLSGQKLQQANDEKGTDEASTLQLLKTHLALEQTVETYAETVGMLS
QQCQQLLELGHPESEQITKQQSHIDRLYVSLKDMVEHRKIKLEQQYWLYQLNKDVEELEK
WITERETVASSTDLGQDLEHVTMLQERFTKFASETNNVGQQRMEQVNRMVNEMIDCGHSD
AAIIAEWKDGLNESWADLLELMETRRQMLAASNQLHKFFTDCKEVLAQIAGKTKQLPEVR
ACQANITNPATLQRLMHSFEHALQLLVTQVRQLQENAAQLRTIYAGEKAEAILAKEHEVM
DAWKQLLSSCEASRVQVTSVTDKVQFFSVVRENLMWMEGIMGQIGWDEPRDLTALEVMMK
QHQELKAKIDGRSKTIQQCADLGKILIAAGNPASEEIKEKLDSLLAKQKDLVEKWDKHQE
RLQRKHERFQFAQETIRAEAWLKAKEPPIISKQPEGGQTQAQTDEVEQLILRHEAFRKAA
VTWKERFSSLRQLSAAEKKKEEDKKMPLSSRRMFPLSCLTPSGPSFSSNPTFMRQMVHAQ
IEPTHSETSVEQAAAPAAHRLSSSLASYNPVINGSGYHGLEQHCSGKSVSPSYLGMNHQA
IGGGSDSAFSALNSHSGGQDTSTYLGINNQTTDSAESSGYFGLSMGCVGGSGYVMQSHPG
SGRLGSSGNLAQEQSSNVMGNSVFLQQQNTGSSAYLTQHNMGSSGYSTQPQNMGNSGYLG
HQPNLGSSGYLAPQPNLGSSGYLAQNYHGSGGMGSSGYLAQNHYSSGSLGSSGYLAPSGG
IMDPKMAYAWQHLKADFMQPAINHIHKAVNPLLEASRVQREQYGDIPMADMTGPESGLDL
LHGRLQRDPRGSRSDPQMDHLRREREYKLGRQTSSEQEIQARLNELPMIVRQERYRRRLE
RQSSSEQEGSGKQRLQRQDSSDLEGSVKDGSDKRSGEKRSTMAEIVEQVQEREAAHARGE
PYRPPSSLSAPVTRFDGRPRARDRPKPRRRPRPKEPEETRRSRSAPATGAPTTPQPPSHT
AQNEGFLYRKRATSSDLEAQQRSPTSKSWVNVYCVLKEGKLTFYKDARNHNTTYNGEPAV
DLSNCSFDPSMGYKKKKNVFILQVNDGNNLLVFHAKDEDDLKAWTSNITTCIAEHEAMVK
WDKPGTSGMDPDRSERKERSEGDADARSERSELVGEERSEKERSEKGDGSDKLDTSEIAD
KLEGGAGGSSASGKSK
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgcttatggcccgagacacggcgcgagatgaggctcaaaagctacacaggaagtggctg
aagcaccaggccttcatggcagaactggcacggaacaaggaatggctggccaagatagaa
caggaaggccaggggctaatccaggagaagccagagctccgcacagttgtgcagcagaag
ctcgaagagatcagagagtgctggtctgatttggagactacaaccaaggccaaagctcgc
cagctctttgagaacaacaagccggagccggcggtaaagagctactcggaccttgacaac
cagctctcccacttggagcggcagcccccccaactggagcaggcacatcatctgcccaca
ttcaatgagcagctacagaaattccaggctatggagtctcggtttggggacatttacaag
gatgtggaggaactgggtagcttgcaaggaggtggcctttcccagcgaggtctgatggca
ggtgacaaggagggtggtgagcagtcaggcttggccgagacccgcatcgttcgcctcatt
gagcccctgaaggaaagacgtcgcatcctgctggcttccaaagagatgcaccaagtcgct
caagatttggaagatgagatgttgtggattcaagaaaggcttccccaggcatcatgtaag
gaatatgggagtaatctccagagtgtgcagcagaatgtaaaaaaaaaattgactctccag
agggagcttgcagggcggcgggctcgtgttgaagaggttcttgacagggcggggattatt
gcatcgctgcgtacccctgaagtagagtttgtgcgcgatggggcaggccatgtgcggcag
ctgtgggaggtgttgcagttggagctagaaaggagatctgtgatgctggatgcagcactg
caggctcaacagtattatagtgaggcaaccaaagtagagtcctggttgtcaggtcagaag
ctccagcaggccaatgacgaaaaaggcacggatgaggcaagcaccctacaactgctgaag
actcacctagctttggagcaaactgtggaaacatatgctgagactgtgggcatgctgtcc
caacaatgccagcagctgctagagctcggacacccagagagtgagcaaatcaccaagcag
cagtcccacatagacagactgtatgtgtccctgaaagacatggtggagcacagaaagatc
aagctagagcagcagtactggctttatcagctcaataaagacgtagaggagttagagaaa
tggatcactgaacgagagactgtggcaagttctactgatcttggccaagacctggagcat
gttacgatgcttcaagaaaggttcaccaaatttgcctcagaaacaaacaacgttggccag
cagcggatggagcaggtcaacagaatggtgaatgaaatgatcgattgcggtcattcggat
gcagccatcattgctgagtggaaggatggactgaacgagtcctgggcggatctcttggag
ctgatggagacccgcagacagatgctggcagcatccaaccagctccataagttcttcacc
gactgcaaagaggttttggctcaaattgccggaaagacgaagcagctgccagaggtgagg
gcatgccaagctaacatcaccaatccagccaccctgcagagacttatgcactcttttgag
catgcccttcaactgttagttacacaggtacgacagctgcaggagaatgctgcacagctg
cggactatttatgctggtgagaaggctgaggccattctggcaaaagagcatgaagtaatg
gacgcttggaagcagctgttgagctcttgtgaggccagccgtgttcaggtcacttcagtg
actgacaaagtgcaattcttctcagtggtgcgcgaaaatcttatgtggatggaaggcatt
atgggccagattggatgggacgaacccagggatttgacagcattggaggtcatgatgaaa
cagcaccaggagctaaaagccaaaatagatggccgcagcaaaaccatccagcagtgtgca
gatctcggcaagatcctgatagctgctggcaaccctgcatcagaggagattaaagagaaa
ctggatagccttctggccaagcagaaggatcttgtcgagaaatgggacaaacaccaagaa
aggttacagcgcaaacacgagaggttccagtttgcccaggagacaataagggcagaagcc
tggctgaaggccaaggaacctccgatcatctccaagcagccagagggcggacagacccag
gcccaaactgatgaggttgagcagctcatccttcgccatgaagccttccgcaaggctgct
gtaacctggaaagaacgcttcagctctctccgccagctttccgcagctgagaagaaaaaa
gaggaagacaaaaagatgccactctccagtcgaaggatgttcccattatcttgtctgact
ccgagtggtccctcgttcagttcaaacccaacttttatgaggcagatggtacatgcccaa
atagaacccacacactcagagaccagcgtggaacaagctgccgcccctgcagcccacaga
ttgtcttcatcgctcgccagctacaatccagtcataaatggatcagggtatcacgggctg
gagcagcactgtagtggaaagtcggtgagcccctcatatctcggaatgaaccaccaggcc
attggaggtggaagtgactctgctttttccgccctgaattcccactctggaggacaggac
acctcgacatatctggggataaacaatcaaacaactgatagcgctgagagctctggttat
tttggactgtcaatgggttgcgtgggcggttctggctatgtgatgcaaagccacccgggc
agtggcaggttgggaagttcgggtaacctggctcaggagcagagcagtaatgtaatggga
aactctgtgtttctccagcagcagaatacgggaagttcggcatatttgacacaacataat
atgggaagttccggttactcgacacaacctcaaaacatgggtaattcaggatatttggga
catcagcccaatttagggagttcaggatatttggctccacagccaaatttggggagttct
ggatacctagctcaaaattatcatggcagtggaggaatgggtagttcaggctatctcgca
caaaatcattacagcagcggaagtcttggcagttcgggttacctggcgccaagtggtggc
atcatggaccccaaaatggcttatgcttggcaacacttgaaagctgacttcatgcagcct
gcaatcaatcacattcacaaggctgtaaaccccctcctcgaggccagtagagtacagcgg
gaacagtatggtgatatcccgatggcggatatgacggggccggagtcaggactggacctc
ctccacggccgcctccagagggatccccggggcagccgctcagaccctcagatggaccac
ctgagacgagagcgggagtacaaactgggcagacaaacctccagcgaacaagagatccaa
gcccggctgaacgagcttccaatgattgtgcgtcaggagcgctatcggagacgcctggaa
aggcagtcttccagtgaacaggaggggagcggcaagcagagactgcaacgacaggactcc
agtgacctggagggctctgttaaagatggctctgacaaacgctcaggggaaaagagatct
actatggcggagattgtagaacaagtccaggagagagaagcagcccatgccagaggagag
ccgtatcggcctccaagcagcctctcagctccagtgacacgttttgatggtcgtcctcgt
gctcgagatcgacccaaaccgaggaggagaccccgcccaaaagagcctgaggaaactcgc
cgctctcgatcagctccagccactggtgctccgacaacgccccagccaccgtcgcacaca
gcacagaatgaaggattcctatatcgcaaaagggccaccagctctgaccttgaagctcaa
cagaggagccccaccagcaaatcctgggtgaatgtctattgtgtgctgaaagagggcaag
ctgacgttctacaaggacgccaggaaccacaacacaacatacaatggagagccagctgtt
gacctttctaactgttcttttgatccttcaatgggatataagaaaaagaagaacgtcttc
attcttcaagtcaacgatggaaataacttattagtattccatgcaaaagatgaggatgat
ctgaaggcttggacttcaaacatcaccacctgtatagctgagcacgaggccatggtcaag
tgggacaagccgggcacatcagggatggaccctgaccgttccgagaggaaggagaggtct
gagggcgatgctgatgccaggtcagagagatcggagttagtcggcgaggagagatctgag
aaggagaggtcagagaaaggagacggctctgacaagttagacacatcggaaattgctgac
aagctggagggtggggcggggggctccagcgcatctggaaagagcaaatga
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integrated database retrieval system
