Syngnathoides biaculeatus (alligator pipefish): 133491788
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Entry
133491788 CDS
T09681
Name
(RefSeq) short transient receptor potential channel 2-like isoform X1
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133491788
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133491788
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
133491788
NCBI-ProteinID:
XP_061659367
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Position
18:543250..548445
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AA seq
952 aa
AA seq
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MRDVPVLSLQPDQWREIMNKKMQFPPELIGAIREGKAEVVRGLLRTGDGIVRQLDDSEDR
LWREALNLSIRLGSEDIMDALLRGVKFDFRQIHEALLVAVDTDQARVVELLLRRLDQEKG
KKMDVRSFSQAIFDRSVDNSQFAPGVTPLTLACQKDLYDIVSVLTRKGHVIPWPHKISCA
CLECRNGRQYDLLKFSLSRINTYRGIASRAYLSVTSDDAVLSAFGLSRELRKLSRKEPEF
KPQYLSLEELCQEFAVELLGMCRNQSEVSAILNSCGDQSRDEQAFEQGIPDLSRLRLAVN
YNQKQFVAHPICQQVLSSIWCGNLAGWRGSTTAWKLLVSVGIFFTMPLLCLAYWIAPKSK
LGKILRTPVIKFLLHSASYLWFLITLLGESIAMELHRDEFASRQQNILHSSFHMVWVVGF
FWYECKEVWIEGLRSYFLDWWNCLDMMVLSMYLASFALRVLIVLKGHFLCLDTNGTEECA
YFTQAGRHDWHQEDPQLIAEVLFAVTSMMSFTRLAYILPAHESLGTLQISIGKMIDDMMR
FMFILMIIGTAFLCGINNVYVPYVVSPRLGRFNETFHFLFWTMFGVANQDYVDMPQFVLA
EFVGRILYGVFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTV
PVPFNIIPSPKAFFYVLRALFRRLCCCVKSNSAEYPPIASLSTKSCSGDGQVPYRREVIR
ALVRRYIDSARREFEESKRKDIGNRITELSKAVARMHHDLTAVRQRPADEGHAAGAAPSE
DGSSLLGKYIVGARNNFRGFHGRPQENLTSRDVTVHEEEEEEDQTEGRAGVQDGGSRGDE
VKVDEGGVHSGDSGNRSKGGEEKVADGTPCEKGVPGGSGEEADAEEMLAGLELQEVNVAA
RQKHGSHFPADLHERREGGEDLTPSPAGSSGSRDTGFASQEGEPAVDESATG
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgtgcctgtgctgtctcttcagccggatcaatggcgcgagatcatgaacaag
aaaatgcagttccctccggagctcatcggcgccatccgggaggggaaagcggaggtggtg
cgcggcctgctccggaccggcgacggcatcgtccgccagctggacgactctgaagatcgc
ctgtggagggaggccctcaacctgtccatccgcctgggaagcgaggacatcatggacgcc
ctcctgcggggggtcaagttcgacttccggcagattcacgaggccctgctcgtcgccgtg
gacaccgaccaggcgcgggtggtggagctcctgctgcgccgcctggatcaggagaaaggc
aagaagatggacgtccgctccttctcgcaagccatctttgaccgctccgtcgacaactcg
cagttcgcccccggcgtgaccccgctgaccctggcgtgccagaaagatctctacgacatc
gtcagcgtgctcacccgaaagggtcacgtcatcccgtggccgcacaagatctcctgcgcc
tgtctggaatgccgcaacgggcgtcagtacgacctgctcaagttctccctgtcccgcatc
aacacgtaccgcggcatcgccagccgggcctacctctccgtcacttccgacgacgccgtg
ctcagcgccttcggcctcagcagggagctccgcaagctctctcggaaggaacccgagttt
aagcctcagtacctgagcttggaggagctctgccaggagttcgccgtggagttgctgggc
atgtgtcgcaaccagagcgaggtgagcgccatcctcaacagctgcggagaccagagccgg
gacgagcaggccttcgagcaaggcatccccgacctgtcgaggctgcgcctggccgtcaac
tacaaccagaagcagttcgtcgcccaccccatctgccagcaagtgctgtcttcaatctgg
tgcggcaacctggcgggctggagaggcagcaccacagcctggaagcttctggtctctgtc
gggatctttttcaccatgcccctcctttgcctcgcctactggatcgcaccaaagtccaag
ctggggaagatcctgaggacccccgtgatcaagttcctgctccactccgcctcctacctt
tggttcctcatcacgctgctcggcgaatccatcgctatggagctacaccgggacgagttt
gcttccaggcagcagaacatcctgcacagctccttccacatggtgtgggtggtcgggttc
ttctggtacgagtgcaaggaagtgtggatcgaggggctgaggagttacttcctggactgg
tggaactgcttggacatgatggtgctcagcatgtacttggcctccttcgccttacgcgtg
ctgatcgtgctcaagggtcatttcctgtgtctggacacgaatggcacggaggagtgcgcc
tacttcacgcaggctggacgccacgactggcatcaggaggatcctcagctgattgcagag
gttctgttcgcagtgacgagcatgatgagcttcacaaggctggcctacatcctccccgct
cacgagtccctgggaacgctccagatctccatcgggaagatgatcgacgacatgatgagg
ttcatgttcattctgatgatcatcggaacggccttcctgtgcggcatcaacaacgtctac
gtcccttacgtcgtctcgccgcgtctcggcaggttcaatgaaaccttccacttcttgttc
tggaccatgttcggcgtggccaaccaggactacgtggacatgccgcagttcgtgttggcc
gaatttgtcggacggattctgtacggcgtcttcacgctggtcatcgtcattgttttgctc
aacatgctcattgctatgattaccaactcctttcaaaaaattgaggacgacgccgacgtg
gagtggaagttcgccaggtcgaagctatacctcagttacttccgggaaggcctgaccgtg
cccgtccccttcaacatcatcccgtcccctaaagctttcttctacgtcttaagggccctc
tttcgacgcctctgctgttgcgtcaagtctaattctgccgagtacccgccaatagcttca
ttgtccaccaaaagctgctcgggggacggccaggtaccgtaccggcgggaggtcataaga
gctctggtgcggcgatacatcgactctgctcgcagggagttcgaagagagcaagagaaaa
gatatcgggaatcgcatcaccgagctcagcaaagccgtggccaggatgcaccacgacctg
acggcggtccgtcagcgtccggccgacgaggggcacgcggcgggcgccgcgccctccgag
gacggctcgtctctcctgggcaaatacatcgtcggcgccagaaacaatttcagaggcttt
cacggccggccgcaggagaacttgacctcgcgtgacgttacggtgcacgaagaagaagaa
gaagaagatcagaccgaaggccgtgcgggcgtgcaggacggggggtcacgcggcgatgag
gtgaaggtggacgagggcggagttcactcgggagactccggcaatcgatccaaaggagga
gaagaaaaagtggccgacggcacgccttgtgaaaaaggagttccaggaggaagcggcgag
gaggccgacgcggaggagatgctggccggtctcgagctgcaggaagtaaatgtggcggcc
cggcagaagcacgggtcgcacttcccggccgacctccacgagagacgcgagggcggtgaa
gacctgacaccgtcgccggccggcagcagcggctcccgagacacgggctttgcttcccaa
gaaggggagccagccgttgacgagtccgcaaccggataa
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