Syngnathoides biaculeatus (alligator pipefish): 133491854
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Entry
133491854 CDS
T09681
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbia01006
]
133491854 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133491854 (chm)
Prenyltransferases [BR:
sbia01006
]
Protein prenylation
Rab geranylgeranyltransferase
133491854 (chm)
Membrane trafficking [BR:
sbia04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133491854 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
133491854 (chm)
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
CDC45
NAD_binding_8
RPC5
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
133491854
NCBI-ProteinID:
XP_061659494
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All DBs
Position
18:complement(8807726..8814557)
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AA seq
618 aa
AA seq
DB search
MAAEDLPSEFDVLIVGTGLTESVVAAACSRAGQKVLHLDTRSYYASKWASFTFNALLTWI
KERQEPTESGDAHDWSSLLREGEEPICLSNADSASIRNLQVFCFTSEEEEEEEEDEEGVR
CCVEDEEEKKQESTEQTADKQQTEEEEEEQSCSVSTDQRVDAWHDEKEGEEVEECAHAEK
EEPEPPRPRETANQSVPGRKKLTYSHLLKEGRRFNIDLVSKLMYARGSLVELLIKSNVSR
YAEFKNITRILTYRHGNVEQVPCSRADVFASRQLSMVEKRKLMRFLSSCLEEKEEEELEG
DSGRPYSEFLRGRQLGDNLQHFLLHSIAMATEETTTRAGLASTRHFLRCLGHYGNTPFLF
PVYGLGEIPQCFCRMCAVFGGVYCLRHPIRCLLLDKTANRCTTLIDGRGQRIACGHFVLE
DDFLPAHLKNQATPTRSVSRGVLITDRSILPSDQDQVSLVTIPPTEAGLPAVRMVELSPS
TMTCAPGTYLVHLTCQSQLGSAYDDLSPVVTRMFDTMQSHDQGWRPRVLWSFYFNMDDCA
KVDVSSLPSNVYVCSGPDGELGHERAIKQAESIFRKIAPDQDFCPAGPNPEDILYDADDE
VLGLGGVAPATGEEVAQG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaggatcttccgtccgagtttgacgtcctcattgtgggcacaggtcttacg
gagtcagtggtggcggcagcgtgttctcgagcgggacaaaaagttcttcacctggacacg
aggagttactacgcgtccaagtgggccagcttcacttttaacgctttgctgacgtggatc
aaggagcgtcaggagccgacggagagcggcgacgcccacgattggtccagcctattgcgg
gaaggggaggagccaatctgtctgtcaaatgcggattccgcctccatcaggaacttgcag
gtgttctgtttcaccagtgaggaggaagaggaggaggaggaggatgaggagggagttcgc
tgctgcgtagaagatgaagaagaaaaaaaacaagagtccacagagcagacagctgacaag
cagcaaacggaagaagaagaagaagaacaatcatgttcagtgtcaacagaccaacgagtt
gacgcatggcacgacgaaaaggaaggagaagaagtagaagagtgtgcgcacgcagaaaag
gaggagccggagccgccacgcccccgcgagacggccaaccaatcggttcccggcaggaag
aagctgacctattcgcacctgctcaaggaaggacgaaggttcaacatagacctcgtctcc
aagttgatgtacgctcgcggctcattggtggagctgctcatcaaatccaacgtcagtcgc
tacgccgaattcaagaacatcaccaggatcctcacctatcgccacggcaacgtggagcag
gtgccgtgcagtcgggccgacgtgttcgccagccgccagctgtcgatggtggaaaagagg
aagctgatgcgattcttgtcttcctgtctggaggaaaaggaggaggaggagctcgagggc
gacagcgggcgaccgtattcggagttcctgcgcgggcggcagctgggcgacaacctgcag
cacttcctgctgcactccatcgccatggcgacggaggagacgaccacccgcgccggcctg
gcctccacgcgtcacttcctgcgttgcctgggtcactacggcaacacgcccttcctgttc
cccgtctacggcctgggcgagatcccgcagtgcttctgccggatgtgcgccgtgtttggg
ggcgtttactgcctgaggcatccaatcaggtgccttctgctcgacaaaaccgccaacaga
tgcaccaccctgatcgacggccgcgggcagcggatcgcgtgcggccattttgtactggaa
gatgactttctgcccgcccacctgaagaaccaggccacgcccaccaggtccgtctccaga
ggcgttctcatcacagaccgctctattctgcccagcgaccaggatcaggtctccttggta
accatccccccgacagaggcgggactccccgccgtgaggatggtcgagctgtcgccgtcc
acaatgacgtgcgccccgggaacgtatttggtccacctcacctgtcaatcgcaactgggc
tccgcctacgacgacctttcgcctgtggtgaccaggatgtttgacaccatgcagtcacat
gaccaaggttggcgtccgcgcgtgctgtggagtttttacttcaacatggacgactgcgcc
aaggtggacgtcagcagcttgccgtcgaacgtgtacgtgtgctcgggaccggacggcgag
ctgggtcacgagcgtgccatcaaacaggccgagtccatcttccgcaagatcgcccccgac
caggacttctgccccgccgggcccaaccccgaagacatcctgtacgacgcagacgacgaa
gtcttggggcttggcggcgtcgcccccgcgacgggcgaggaagttgcccaagggtga
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