Syngnathoides biaculeatus (alligator pipefish): 133491868
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Entry
133491868 CDS
T09681
Symbol
thoc2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133491868 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
133491868 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133491868 (thoc2)
03041 Spliceosome [BR:
sbia03041
]
133491868 (thoc2)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
133491868 (thoc2)
Spliceosome [BR:
sbia03041
]
Complex C
Other components
EJC/TREX
133491868 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
133491868 (thoc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
133491868
NCBI-ProteinID:
XP_061659530
LinkDB
All DBs
Position
18:401150..419577
Genome browser
AA seq
1578 aa
AA seq
DB search
MATLILPGEWVKNWEKSGKHEFVQLCKRLTEKIDDGCQIKDIQAALYELCCQGVQGNLKL
DLIASVLCEMMELRDDMASILADVFSVLDLETVALEEKHKRDHYIQLVGSCLIFVPDAIL
KERLDPETLESLGLIKQAHQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLITELGQDL
SGSITSHVVLESIKSLIGCFNLDPNRVLDIILEVYESRSDQDDFFLSLIKSYMCEALTLC
HILGFKFKFYQEPNEETPKSLYHIAAALLHYNLIELEDLYVHLLPLDSAIVEEHKLVISE
AKQIARKLVMVVVPSDKSEDKEKEKEKEEEKIAQPPDNQKLGLLEALLGIGDWRHAQSIM
DQMPSFYATSHKSIALALCQLLHLTVEPLYRAVGLPKGARGCVMHPLKSERAPKPAASFE
DLRRETFSMLGYLGPHLAHDPILFAKIVRLGKAFMKEYQCSESLDVEDKTETLLSCFLSI
ADQVLLPSLSLMECNACMSEELWGFFKLFPYHHRYRLYGQWKNETYSSHPLLVKVKAHTV
EGARYIMKRLTKENVKQSGRQIGKLSHSNPTILFDYMLSQIQWYDNLISPVVDSLKYLTS
LNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGAVFRKYPIELAGLLQYVTN
QLKAGKSFDLLILKEVVQKMAGIEVTDEMTSEQLEAMTGGEQLKAEGGYFGQIRNTKKSS
QRLKDVLLDHELALPLCVLMVQQRNGVVFLESGDKDLKLVGHLYDQCHDTLVQFGGFLAS
NLSTEDYIKRVPPIDVLCNQFHTPHDAAFFLSRPMYAHQISSKYDELKKAEKGNRQQQKV
QKYVAACEQVMTPVHEAVMSLHPARVWEDLRPQFYATFWSLTMYDLAVPHAAYEREINKL
KTQIKAIDENPEIPMNKKKKEKERCTALQEKLQEEEKKQQEHVQRVLHRLKLEKDKWLMT
KSTKNETITKFLQLCLFPRCIFSSIDAVYCARFVELVHQQMTPNFCTLLCYDRVFSAIIY
TVASCTENESHRYGRFLCCMLETVTRWHSDRAVYEKECGNYPGFLTILRASGFDGGQQAN
PLDYENFRHVVHKWHYMLTKASVHCLETGDYTHIRNILIVLIKILPCYPKVLNLGQALEY
RVHKICVKEKEKRPDLYALAMGYSGRLKSQKVRMVPENEFHHKEPPARNVTPANQQNGPG
STGKPAAAATMKGEDGFSEDGDRGKDKSQTTKLVNKANAAAAKVTTSNGNGALNSIKSLK
ERDDKEKSAKEKKEKKEKTAGGTPDTKAEARREKLREERAAAAKDERALREGKEKTPKAD
RDKVKAEEKSKDDKTTKAGNGESAEPCRERDAAKESKSKDKGDRSAAAGCLKSPLARSDV
ADTERDHKRRKLDSHSSPSHSSSVKLICHLHSSPQDNSNDPKESASKHHLNYNSVKRSKS
RERELEKNELENALGRCKEKKEEKERKERKRDVGASSEREASLEPKRRKDENGTNSSKNS
QCGGESPCDSPLSMEKEKNKRSKSSSKEKGDSLKPERMSVRGKKESRHDKDKSEKKEKRD
SSGGKEEKKHHKSSDKHR
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacttatcctccccggtgaatgggtcaagaattgggagaaatcgggaaaacac
gaattcgtgcagctctgcaaaagactaacggagaaaatagatgatggatgtcagataaaa
gacatccaggcggccttgtatgagctctgctgccaaggtgttcagggcaacctcaagttg
gacctcatcgccagcgtcctctgtgagatgatggagctgcgcgatgacatggcatcgatt
ttagctgatgtctttagtgttctagatttagagaccgttgccctggaggaaaaacacaaa
cgtgaccattacatacagttggtgggctcgtgtttgatttttgttccagatgccatcttg
aaagagcgtctggatccggaaacacttgaatctcttggacttataaaacaagcgcaccaa
tttaatcaaaagatcgtcaagatcaagaccaaactattttacaagcaacagaagttcaac
ttgctaagggaggaaaacgagggctacgccaaactgatcacagagcttggccaagacctg
tccggcagcatcaccagccacgtcgtactggaaagcatcaagtcgctcataggatgtttc
aatttagatccgaaccgtgttttggacatcatcctggaggtgtacgagagccgatcagac
caggatgacttcttcctgtccctcatcaaatcctacatgtgcgaggcgctgaccctctgc
cacatactcggctttaagttcaaattttatcaggagccaaatgaggaaacgcccaagtcg
ctgtaccacattgctgctgctctacttcattataacctgatcgaattggaagatctctac
gtacatcttttgccactcgattctgccatcgtggaggaacacaaactggtaatttccgag
gccaagcagattgcccgcaagctggtcatggtcgtagtgccttcggacaaaagtgaagac
aaggaaaaggagaaagaaaaggaggaagagaagattgcgcagccacctgataaccagaag
ctcggtttgctggaagcccttctcgggatcggggactggcgccatgcgcagagcataatg
gaccagatgccttccttctatgctacttctcataagtccatcgcgctggcactctgtcag
ctgttacatctgactgtggagcctctttaccgagcggttggcctcccaaaaggcgcacgg
ggatgcgtgatgcatccgctgaagagcgagcgggccccgaagcccgcagcgagctttgaa
gacttacgcagggaaacgttcagcatgctgggctacctgggtcctcatctcgcgcatgac
cccatcctcttcgccaagattgtgcggcttggcaaggcattcatgaaagagtaccagtgc
agtgagagcttggatgtagaagataaaacggaaaccttattgagttgtttcctgagcatt
gcggaccaggtgttactcccgtccctttcgctgatggagtgtaatgcttgcatgtccgag
gagctgtggggtttctttaagctctttccttaccatcacaggtaccgcctgtacggacaa
tggaaaaatgaaacgtattccagccaccccctgttggtaaaagtcaaagctcacaccgtg
gaaggggctcgatacattatgaagcgcttgaccaaagagaatgtgaaacaatcgggaagg
cagattggcaaactaagccacagcaaccccaccatcctttttgattatatgctgtcccag
atccagtggtacgacaacctcattagtccagtggtggattccctgaaatacctcacatcc
ctcaactacgacgtcttggcctattgcattatcgaagctctggccaatcccgagaaggag
aaaatgaagcacgacgacaccacaatctcatcgtggctccaaagcctggcgagtttgtgt
ggagccgtgtttcggaaatatccgatcgaattggctggtcttctccagtatgtcaccaat
cagctgaaagcaggaaaaagttttgacctgctgatcctgaaggaggtggtgcagaaaatg
gctggcattgaagtcacagatgaaatgacatcagagcagcttgaagcaatgacaggaggg
gaacaactcaaagctgagggtggctactttggtcagatcaggaacactaaaaagtcctcc
caacgccttaaggatgtgctacttgatcatgaactggccctgccgctttgcgtactcatg
gtccagcaaagaaatggtgtggtgttcctcgaaagtggagacaaagatctcaaactggtg
ggccacctgtatgaccagtgtcatgacacactggtccagtttggtggcttcttggcctcc
aacctcagcacggaggactacatcaagcgcgttccccccattgacgtcctttgtaaccag
ttccacacaccacacgatgctgcgttcttcctttctcggccaatgtacgcccatcaaata
tcgtcaaaatatgatgagctgaagaaagccgagaaaggtaaccggcagcagcagaaggtc
cagaagtatgtcgcggcctgcgaacaagttatgacaccggtgcacgaggccgtgatgtcc
ctccatcctgcccgggtttgggaagacctccgcccccagttctacgccaccttctggtct
cttacgatgtatgacctggccgtgccacatgctgcctacgagcgtgagatcaacaagctc
aagacccagatcaaagccattgacgagaatcccgaaatcccgatgaataagaaaaagaaa
gagaaggaacgctgcactgcactgcaggaaaaactgcaggaggaggagaaaaagcaacag
gagcacgtccaaagggtgctccatcgcctcaaactggagaaagacaaatggttgatgacc
aaatctaccaagaatgagaccataacaaagttcctgcagctgtgtctgttccctcgctgc
atcttctcttccatcgacgccgtttactgcgcccgttttgtcgagctcgttcaccaacag
atgacgcccaacttctgcactctgctgtgctacgacagggtgttctcggcaatcatttac
acggtggccagttgtacggaaaatgaatcccaccgatacggccgcttcctctgctgcatg
ctggagacggtgacccgctggcacagcgatcgtgccgtctacgagaaggagtgtggaaac
taccccggcttcctgactattttgcgagcctcgggcttcgatggaggccaacaagccaac
ccgctcgattatgagaacttccgtcatgtggtgcataaatggcattacatgttgacaaaa
gcttcagtacactgccttgaaactggagattacacgcacatccgcaacatccttatcgtt
ctcatcaaaatcctgccgtgttaccccaaggttttgaatctgggccaagcgctggagtac
cgcgtccacaagatctgcgttaaggagaaggagaagaggccagacctctatgccttagcc
atgggttattcaggtcgattgaaaagccagaaggtgcgcatggttcccgagaatgagttt
caccataaagagccaccggcacgcaatgtcactcctgccaatcagcagaacggacccggc
agcacgggcaagcccgccgccgccgccacgatgaagggagaggacggcttctcggaagat
ggggaccgggggaaggacaaatctcagactaccaaactagtaaacaaagccaacgccgcg
gcagctaaagtcacaaccagcaacgggaacggagctctcaacagcatcaaaagcctgaaa
gagcgcgacgacaaagagaagagtgccaaggagaaaaaagagaaaaaggaaaagacagca
ggcggcactcctgacacaaaagcggaagcccgccgagaaaagctgagagaggagagagcg
gcggcggcaaaagacgagcgggcgcttcgcgagggtaaggagaagacgcccaaggcggac
cgagacaaagtcaaggccgaggagaagagcaaagatgacaagaccaccaaagcgggcaac
ggggagtccgcggagccttgtcgagagcgcgatgccgccaaggagtcgaagagcaaggac
aaaggggacagaagcgctgcggccggctgcctcaagtcgccgcttgccagatcggacgtc
gctgatactgagagggatcacaaaagacgaaagctcgacagtcactcttctccgtcccac
tcctcgtctgttaagctcatctgtcatctccattcatccccacaggacaatagcaacgat
cccaaggagtccgcatccaagcaccacctcaactacaattcagtaaagcggtccaaaagc
agagagagggagctggagaagaacgagctggagaatgcgctcggccgatgcaaagagaag
aaagaagaaaaggagcgcaaagagaggaagcgagacgtcggcgcgagcagcgagcgcgag
gccagcctcgaacccaaacgcaggaaggacgagaacggaaccaactcctccaaaaacagc
cagtgcggaggcgagagtccttgcgactcgccgctctcgatggagaaagagaagaacaag
cgctccaaatcctccagcaaggagaagggcgactcgctcaagcccgagaggatgtccgtc
cgaggaaaaaaggaatcccggcacgataaggacaagtctgaaaagaaagaaaagcgggac
agcagcggcggaaaggaagagaaaaaacaccataagtcctccgacaaacacagatga
DBGET
integrated database retrieval system
