Syngnathoides biaculeatus (alligator pipefish): 133491897
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Entry
133491897 CDS
T09681
Symbol
vps36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133491897 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133491897 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133491897 (vps36)
Membrane trafficking [BR:
sbia04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
133491897 (vps36)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133491897 (vps36)
Exosomal proteins of colorectal cancer cells
133491897 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Xre-like-HTH
MA3
TssO
Motif
Other DBs
NCBI-GeneID:
133491897
NCBI-ProteinID:
XP_061659596
LinkDB
All DBs
Position
18:complement(16942982..16950237)
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AA seq
382 aa
AA seq
DB search
MDRFSWSNGLLEINETLVIQQRGVKLYDGDDKAKLDIGIALLSTHRLIWRDGKNHDCCIS
MPLSQIIFFEEQAAGIGKSAKIVIHLHPVPANKEQGPYQNSKFSYIKLSFKEHGQIEFFR
RLNEEMTQKRWENTPASQPIPTGVGSQAGRIRAVGIVGIERKIEERRKETDKNISEAFED
LSKLMVKAKDMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETHGSGTH
YHMQLAKQLGDMLQAPLEERGGMMALTEVYCLVNRARGMELLSPEDLVNACKMFESLKLP
LRLRVFDSGVMVVQLQSHSEEEMIASALDNVSEKGSLTAEEFAKLLGLSVLLSKERLLLA
EKMGHLCRDDSVEGLRFYPNLF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggatcggttttcttggtcaaacggtttgttggaaattaacgagactttagtaatacaa
caacgaggcgtcaagttgtatgatggtgacgataaggctaaacttgacattggaattgcc
ttgctgagcacccatcgtttgatttggagggacggtaaaaatcatgactgctgtatttcc
atgccattgtcacaaataatattttttgaggagcaggctgcaggaatagggaaaagtgca
aaaattgttatacacctgcatccggtacctgccaacaaggagcaaggtccctaccaaaac
agcaagttttcctacatcaagctctcttttaaagaacatggtcagattgagtttttcagg
aggctaaatgaggagatgactcaaaaaagatgggagaacacacccgcttcccaacccatc
ccaacaggagtcggctcgcaggcaggaaggatacgagcggtcgggattgttggcatcgag
cgaaagatagaagagaggaggaaagaaactgacaaaaacatctcagaggcctttgaggat
ctcagtaagctgatggtaaaggccaaagacatggtggagctgtccaaatctatagctaac
aagataaaagacaaacaaggggacataacagaggatgagaccatccgctttaagtcgtac
ctgctgagcatgggtatcgctaaccccgtcacacgggaaacacatggctcaggcacacat
taccacatgcaactggctaaacaactgggagatatgctccaggcccctctggaggaacgc
ggaggcatgatggcactcactgaggtctactgtctggtcaaccgggctagaggcatggag
cttttgtccccagaagatttagtaaatgcatgcaagatgtttgagtccttgaagctccca
ttgaggctgcgtgtatttgacagtggcgtgatggtggtccagctgcagtctcacagcgaa
gaggaaatgatcgcctcagcgctggacaatgtgtcagagaaaggatctttaacagctgag
gaatttgcgaaactcttgggtctctcagtgcttctgtctaaggagcgtttgctactggcc
gagaagatgggtcacctgtgtcgagatgactccgttgagggtttgaggttctaccccaac
ctcttttga
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