Syngnathoides biaculeatus (alligator pipefish): 133491900
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Entry
133491900 CDS
T09681
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133491900 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133491900 (pom121)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133491900 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
133491900
NCBI-ProteinID:
XP_061659601
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Position
18:complement(13112135..13120951)
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AA seq
1170 aa
AA seq
DB search
MSPREKNLALLSALGIVSIAFYFIPSFIYIVGTVVFCAGACLLFRGAPLPARIGLNPRGG
FIAPAGYVRRFWDWWVSDVSVLSRRKTKLDVGRREPREASVGAFRQRPSDAAIYREGPIA
SDTFLFSPGDFLMGSYIGKPESPTSDFGRPTVVRNPREQLREKLSRPNHAVYTPNRRLSF
AGEPSATVGHFTITPQRHYPLQQPGATSVGVLPPIRWDGFRKKSILTPRNSLAPHSPVTV
KIARPDHTSSSLEHLSCAAVPKAPADPCSRESVLKVLKERRKREIDDADRNFTTEQTSKR
RRNDSGGSAQSAFEPLLPNGAPSQLVPKPGSLKRGMISVTEESTFKRSRTSSISSASGVH
SPRGMLGSKRNPIQSSYSSTQGLMQFKKPSAPSSPMSSPGSSRSQTPDGTAKKQREDDGL
SPSSASSVRSERAVTEKSLDTSKQTPIPKVTLTTSTISGSSGKRKRKIQLVSSNRDDQIS
LPLPPELGYTITVKDLDEEKKATINKIQKVLETPIPEPEMSAPPSATTMPASSTILTLKT
TTASSTLTLSSLLAAPLPKTSITINLDPNPAPAISKTLLEALKMKSPVSSASAASTTTVS
ALSSQSTPIVLSPKALTDAPKLPPVSQSQPPSTNVDQPSAFTQVLGQVSKPASSIPSLPA
TGVFGMLNQNDIPVSSSASNPTSIATAPVSVSNPLLASGFKPIFAVATTASTPSTIAAVE
SKPLVQNFKAIFGSSSTGSGFSLLSDKNSATASTTVSCTAGASFAPPPPYVTSTATVSLS
SSIFGASTSSAVTPSLFSGLTSIAAATTGSTTTTTSSSTANPAAQSAVKSIFGNWSAPPS
TSSSTTSTPALTTGFQFGAVATTTAAPPTASATTAAAPTTTSNNAFTFGAAQQPPQVPSQ
NMFAFGQTAVSQNTTKASFGAFGMAAPASTAATTNAVAQAPTQSTFTFGKPSFQTLAPQS
TFSSTATAAPKPFTFGSSVAPAGPSSNPAPAPFNFGGTAAAVTASSSFVTAPKPAFGGGS
NVFAFGSTTAPSAAPGFGQATQAQSTPSFSFGGAGPQQTPSGPAPPASSGFNFGAVISQP
QFGTPATNNPTPQMGGFTFGAAATSTPSFGQNTAVAAGPIPFGSPNTPVQGFNAVPFGSP
ATPSFSIGAGSKPSGARQRLQARRQHNRKK
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctagagagaaaaatttagctctcctctctgcgttaggcatagttagtatagcc
ttttattttattccctcttttatttacattgttgggactgttgtgttttgtgccggcgcg
tgcctcctgtttcgcggagcgccgcttcccgccagaataggcctcaatcctcggggtgga
tttatcgctccagccggctacgtgcgccgcttttgggactggtgggtgagcgacgtgtct
gtgctttcgcggaggaagacgaagctcgacgtcggcagacgtgagccacgcgaggcgtct
gttggagctttcagacaaaggccgtccgacgctgctatctatcgagaaggacccatagct
agcgacacgtttctttttagccccggtgactttctcatgggaagctacattggcaaacca
gaaagtcccaccagcgactttggtaggcccacagtggtccggaaccccagagagcaactg
cgggagaagttatccagacccaaccatgctgtctacacaccgaaccggaggctgtcattt
gccggggagccatcggccacggtgggacacttcaccatcaccccccagcggcattacccc
cttcagcagccaggcgccacctctgttggggttctacctcccatcagatgggatggcttc
agaaagaagagcatcctgactcctcggaattcactggcgcctcacagtcccgtgactgtg
aagatagccagacccgaccacaccagctctagtttagagcacctgagttgcgctgctgtg
cccaaggcccccgcagacccctgctccagagagagcgtccttaaggtgttaaaggaaagg
cgcaaacgagagattgacgatgcagacagaaactttaccactgagcagacaagcaagaga
aggcgtaacgacagcggaggaagtgctcaatctgcttttgagcccctcttgcccaacggg
gccccatcacaactggtccccaagccgggaagcctaaaacgaggtatgatctcagtgaca
gaggagtccaccttcaagaggtcccgcacctcctccatcagctctgcgagtggtgttcac
tctcccagagggatgctgggttcaaagagaaaccccatccaaagctcctacagttctaca
cagggcctgatgcagtttaagaagccatctgcgccgagctctcctatgtccagcccgggt
tcttcccgctctcagacaccagacggaactgccaaaaaacagagagaggatgatggcctt
tctcccagctcggcgtcctctgtgcgatcagaaagggcggtgacagaaaaatcacttgat
acatccaaacagactccaatccccaaggtcacactcacaacctcaacaatctctgggagc
agtgggaagagaaaacgtaagatccagctggtatccagcaatcgggatgaccaaatctca
ctgcctcttccacctgagttgggttacactatcactgtgaaagatctggatgaagagaag
aaggccaccatcaacaagatccagaaggtcctggagacacccattcccgaaccagagatg
tcagcccctccgtcggccactactatgcccgcttcgtctaccatcttaaccctcaagacc
accactgcctccagcaccctcaccttgagcagcctcctggctgcccctctgcccaaaacc
tccatcaccatcaacctggatcccaacccagcccctgcgatttctaaaaccctcctagag
gctctgaagatgaagagtcccgtgagctccgcctccgctgccagcactaccacagtgtct
gcattgagctcacaatcaacacccattgtcttaagcccaaaggcactaacagatgccccg
aagctgcctcccgtctctcagtcccaacccccttcgaccaacgtggaccagccctctgcc
ttcacgcaggtcctgggccaggtttccaagcccgccagcagcattccatcgctaccggcg
accggggtgtttggaatgttgaaccagaacgacattcctgtctcatcctctgcttctaac
cccacctccatcgctactgcgccggtcagtgtctccaaccctctgctggcctcggggttc
aaacccatctttgccgtcgctaccaccgcctccacgccgtcaaccattgcagccgtggag
agtaaaccccttgtccaaaacttcaaggccatttttggaagcagctctactggatctggg
ttctcccttctttcagacaaaaactcagccacagcatccacaacggtttcttgcaccgcc
ggtgccagctttgcaccaccaccaccctacgtgacctctaccgcgacagtctctttaagt
tcttcgatattcggtgcctcaacaagcagtgccgttacgccgtcactcttctctggattg
acctccattgcagcagccaccactggctccactaccaccaccaccagcagcagcaccgca
aatcccgcagctcagtcagccgtaaaatccatctttggaaactggtcggcaccaccctca
acgagctcgagtaccacctcaacgccagctcttacaacaggttttcagtttggagccgtc
gccactacaaccgctgcgcccccgactgccagcgctacgacagccgccgcccccaccaca
acctccaataacgctttcacattcggagccgcgcagcaaccccctcaagtccccagccag
aatatgtttgcctttggtcagaccgcagtcagtcagaacacaaccaaagcttcatttgga
gcttttggaatggccgcgcccgcatccaccgccgccaccactaacgctgtcgctcaggcc
ccaacccagtccaccttcacctttggaaagccgtcgtttcaaaccctggcccctcagtcg
accttcagttccacagccactgccgcacctaagccgtttaccttcggaagcagtgtcgcg
ccagctgggccctcgtccaaccccgccccggcaccttttaactttgggggaactgcagcc
gctgtgactgcctcctccagttttgtgacggcacccaaaccggcgttcgggggcggctcg
aacgtatttgctttcggcagcaccacggcgccctcggcggcgccgggctttggtcaagcc
acccaggcccagagcaccccatccttctcctttggtggcgccggtcctcagcagaccccc
tcgggccctgcaccaccagcatccagcgggtttaactttggcgccgtcatttcacaacca
cagttcggaacacctgctactaacaatcccacaccgcagatgggaggcttcacctttggg
gctgctgccacatccacaccatcttttggccagaatactgctgtggctgctggtccgatt
ccttttggaagtccaaatactccggtccagggcttcaacgctgttccttttggttcacca
gcgactccttccttctccatcggggcgggctcaaagccaagcggggcgcggcagagacta
caagcgcggaggcagcacaacaggaagaagtaa
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