Syngnathoides biaculeatus (alligator pipefish): 133491955
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Entry
133491955 CDS
T09681
Name
(RefSeq) protocadherin beta-15-like
KO
K16499
protocadherin delta 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133491955
Cell adhesion molecules [BR:
sbia04515
]
Cadherins
Protocadherins
133491955
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
133491955
NCBI-ProteinID:
XP_061659708
LinkDB
All DBs
Position
18:complement(9726036..9730506)
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AA seq
1003 aa
AA seq
DB search
MDTQGAKKGRKVCVNCSISCAFAVLVCFLHSACAQIRYSIPEELEHGAFVGNIAEDLGLD
LDKLSARRFRIVSGARRQYVEVNLENGVLFVNERLDREELCEQSLACSFHLQVVIENPLE
LYRVEVEILDVNDNSPSFPWGEFNLDISESAAPGSRFPLESAQDLDVGSNSLRTYLLSVN
EHFTLDIHTRSDGSKFAELVLQNPLDREQQSAHQMVLTAVDGGSPERSGTAQIDITVLDA
NDNAPVFDQSFYRVRLAENALKGAVVIKLNASDLDEGTNADISYSFSGHAPIKVRQLFAV
DARTGEIKVKGLIDFEKARMHEIYIQAKDKGPSAVAVHCKVLVNVLDRNDNVPEVILTSV
STPVQEDAPPGTVIAVISVTDKDSGENGNVDCEIPNLIPFQLHSSFKNYYTLVTSDFLDR
ESVAEYNITLTARDLGSPPLFTRKTIVVQVSDVNDNAPLFKQPSYSVYLTENNAPGASIC
SVTAQDPDYGQNAYLSYSIVEADIQEMPASTYVSINSDNGNVYALRSFDHEQLKSFQITV
QAQDAGFPPLTGNVTVTVFILDQNDNAPIIVSPLPQNGTPPTETVPRSADAGYLITKIRA
VDADAGQNSRLFFQMLQATDPSLCSVALYTGEIRTVRHLVEKDPTRHRLVILVKDNGQLP
LSATVSIILSVVDSLPESQADSGDLSLSPRHSSNFSLYLIVSLGTVSLTFLVAIIVIVTV
RRLKDGASRKESNLHSTGVRCCCCRSASPGGTNVFKKSNLNIRTSADPVGCAEASGNSAL
PQAYCYKMCLTPESSKSDFMFLKPYSPILSARQNNAKSADYLTSGWSALGHNELANNRTS
TPKELKYSSQDWTWTKNQRNSSYKRYSSGNVECTLSRPQQYDADEYFSSAAPQYWTWGKQ
MSECKTSLQDKTNVICTPKYSQPQSEAAGYQHNVYIPSDTPDYQHNVYIPGSISGYSTLK
LAPRGELDVYNTFSTFGKKKKMTSKYEQSSDKDDGLMSRGVLK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggacactcaaggggcgaagaagggacgcaaggtgtgcgtaaactgctccatatcctgc
gcgtttgcggtgctggtctgcttcttgcactcggcatgcgcacagatccgctactccatc
ccggaggagctggaacacggcgcctttgtggggaatatagcggaggacttgggtttggat
ctggataaactctctgcgcgaagattccgcatcgtgtccggcgcaaggaggcagtacgtg
gaggtcaatctggaaaatggagtcttatttgtgaacgagaggctcgatcgggaagaactg
tgcgagcagagtttggcgtgttctttccatttgcaagtggtgatcgaaaacccgctggag
ctgtatagagtcgaggtcgaaattctggacgtgaatgacaactctcctagcttcccgtgg
ggcgaatttaatctggacatttcggaatccgcggcaccggggtcccgtttcccactggag
agcgcgcaagacttggacgtgggttccaattcgttgcgcacttacttgctgagcgtcaat
gagcatttcactttggacatccacacaagaagtgatggcagtaaattcgccgagctcgtc
ctgcagaacccgttggaccgggaacagcagagcgctcaccagatggttctgacagcggtg
gacggaggctcgccagagaggtctggaacggcgcaaattgacatcaccgttttggatgca
aacgataacgcgcctgtcttcgaccagtctttctatcgcgtgcgcctggcggagaacgca
ctcaagggtgcagttgtcatcaagctcaacgcgtccgacttagacgagggcaccaacgcg
gacatcagctactctttcagcgggcacgcccccatcaaagtgcgccagctcttcgcggtg
gacgcgcgcaccggggaaatcaaagtgaaggggctgatcgattttgaaaaagcaaggatg
catgaaatttacatccaggcaaaggacaaaggtccttccgctgtcgcggtgcactgcaag
gtgctggtgaacgtcttggaccggaacgacaacgtcccagaggtgatcctaacgtccgtg
tccacgcctgtgcaggaggacgcgcccccgggcaccgtcattgccgtcatcagcgtcaca
gacaaggactcgggggaaaacggcaacgtggactgtgagatcccaaatctgatccccttc
cagctccactcctcctttaaaaactactacacgttggtgaccagtgactttctggacagg
gaaagcgtggcagagtacaacatcactctcaccgcaagagatttggggtctccgcctctg
tttacgaggaagacgattgttgtgcaagtttctgatgtgaatgacaatgcccctctcttc
aagcaaccttcttattctgtctacttgactgagaataatgcacccggggcctccatctgc
tcggtgacggcacaggacccggactatgggcagaacgcatatctctcttactctatagta
gaagccgacatacaggaaatgcccgcctcgacctacgtctccatcaattccgataatggg
aacgtttatgccctcaggtcgtttgaccatgagcagttaaaaagttttcaaatcacagtg
caagctcaagatgccggattcccgccgttgaccggcaacgttacggtgaccgtctttatt
ttggaccaaaatgacaacgcgcccatcatcgtgtcgcctctccctcaaaacgggacgccg
ccgactgaaacggtgccgagatccgctgatgccggctacctgatcaccaaaatacgagcg
gtggacgcagacgcgggtcagaactcgcgcctcttcttccaaatgctccaagcaactgat
ccgagcttgtgcagtgtggctttgtacacgggggaaattaggacagtacgacatttagtg
gagaaagaccccacgaggcacagattggtcattctggtgaaggacaatggccaactaccc
ctctcggccacagtttccatcattctgtcagtggttgacagcctgccagaatctcaggcc
gattcgggtgacctgtccctgagcccccgtcacagctccaactttagcctctacttaatc
gtgtccctcggcactgtctccttaacgtttctggtggctatcatcgtcattgttactgtg
aggaggctgaaggacggagcgtcccggaaagagtccaacttgcactccaccggcgtgcgg
tgctgttgttgtcgctcggcatcgcccggaggcaccaacgtcttcaaaaagtccaatttg
aacatcagaacgtcggcggacccggtcgggtgcgccgaggccagcggtaatagcgcgctc
cctcaagcttactgctacaagatgtgcctgacgccagaatcctccaaaagcgacttcatg
ttcctcaagccctacagtcccatcctgtctgctcggcagaataatgccaaaagcgcagac
tacctgacatctggttggagcgcactgggccataatgagctggccaacaaccgaacgtca
acccccaaagagcttaagtattccagtcaggactggacctggaccaagaaccaacgcaat
tcatcatacaagaggtacagttccggaaatgtggaatgcacattatcccgtccacagcag
tacgacgctgatgagtatttcagctctgcggcaccgcagtactggacctggggaaaacaa
atgagtgaatgcaaaacgtctcttcaagacaaaaccaacgtcatttgtactccaaagtac
tcgcagcctcagtccgaggcagcgggctatcagcacaatgtgtacattccctccgataca
ccggactaccagcacaatgtgtacattcctggcagcatatctggctacagcacactcaag
cttgcaccgcggggggagctggacgtctacaacaccttttctacttttgggaagaaaaag
aaaatgacctctaaatatgaacagtcttctgacaaagatgatggcctcatgagccgtggt
gttctgaaataa
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