Syngnathoides biaculeatus (alligator pipefish): 133491986
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Entry
133491986 CDS
T09681
Symbol
zc3h12b
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133491986 (zc3h12b)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
133491986 (zc3h12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
133491986
NCBI-ProteinID:
XP_061659765
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All DBs
Position
18:complement(8517020..8579716)
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AA seq
827 aa
AA seq
DB search
MEKHPCREKNINSYGDRHAADEPEDGSGSESDAEERRRLKARLNDGGGCNKWEPLAPTKP
HRQLCRSPCLDQPSFSQSSTVRESHEDETGAGPASERAYQSKMDFALKLGYSGEQVEMVL
NKLGAAALINDVLAELVRLGNKAESESQPSASLPLSPCAQETVSPEVPVEEEPADPFENL
RPIVIDGSNVAMSHGNKEVFSCLGIQLAVEWFQEKGHKDITVFVPAWRKEQSRPDALITD
QEILRKLEKEKILVFTPSRRVQGRRVVCYDDRFIVKLAYDSDGIIVSNDNYRDLQNEKPE
WKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQPCPYGKKCTYG
HKCKYYHPERVNQPLRSVADELRAFAKLSAVKTMSEGALAKCGTASAVANQDGNSEAAKR
VAPKRQSDPSIRSVACESPESLSVGRKSETNSVPSLVTALSVPTMQPAKSHAAGALNTRS
ASSPVPGSLQFSHSSLEHMSSVQYPPILVTNSHGASVTYGEQFPKYDSVSDHGYYSLRSD
FSTMSMSSVHNVDSFCSMEHEHVACQRSRSRCAESCLGHSNSDSFSSYGDPYPGSADGSL
EESLKGQQQPPSASTGRMQTYSRGFRREGLTRVQTYGPEEPKQGPCKQLTPHVQHATVGA
RSSCPGDYPVAQSGLPPLSSQPTRSLGMTRMDSVSDSRLYDSNPMRQRRPPLCREQHASW
DPLPCANESYGYHSYPLSGSLMPCCERVMVRSMPDKMEQIWNSPWESPPAAEHQQRYVIP
EHQYQTYRNLCNIFPAYVVHSVMEKNPHLTDPQQLAAVIVTNLRSCH
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcacccatgcagggagaagaacattaactcgtatggggaccggcacgccgcc
gacgagcccgaggacggcagcggctcggaaagcgacgccgaggagcggcggcgcctgaag
gcccggctgaacgacggcggcggctgcaataagtgggagcccctggcgccgaccaagccc
caccgccaactgtgtcgttcgccgtgcctggaccagcccagtttttcccagagcagcacg
gtgcgcgagtcccacgaggacgagacaggcgcggggccggccagcgagagggcgtaccag
agcaaaatggactttgccttgaagctgggctactccggggagcaggtggagatggtgctc
aacaaactgggggccgccgcgctcattaatgacgttctcgccgagctggtgaggctggga
aacaaagcggaatcagagagtcaaccttctgcgtcgctaccgcttagcccctgcgctcaa
gagaccgttagtcccgaggtgcccgtggaagaagaacccgcggaccccttcgagaacctg
cggccgatcgtcatcgacggttcgaatgtggcaatgagccacggaaacaaagaggttttc
tcttgccttggaatccaactcgccgtcgaatggttccaggaaaaaggccacaaagacatt
accgtctttgtcccggcgtggaggaaggagcagtccaggcctgatgccctcattacagat
caagaaatattacgcaagctggaaaaggagaagatcctggttttcaccccgtctcggagg
gtccaaggcagaagggtggtgtgctacgacgatcgcttcatagtgaagctggcttatgat
tctgacggaattattgtgtcaaatgacaactacagagacttgcaaaacgaaaaaccggag
tggaagaagttcatcgaggaacgcctcctcatgtattcgttcgtcaacgacaaatttatg
ccacccgacgacccgctgggaaggcacggtccgagcttggaaaatttccttcgcaagcgt
cccgtcgtcccggagcataaaaagcaaccttgcccctacggcaaaaagtgcacatacgga
cacaagtgcaaatattaccacccggagcgcgtcaaccaaccgctgcggtcggtggccgac
gaactgcgggccttcgccaaactgtcggcggtcaagaccatgagcgagggggccttagcc
aaatgcggcaccgcttcggccgttgccaaccaggacggcaactcggaggcggctaaacgc
gtggcgcccaaacgccagtccgatcccagcatccgctcagtggcctgcgagtctccagag
agcctgtccgtcgggaggaaatctgagaccaattccgtgccttccctcgtgaccgctctc
agcgtgcccaccatgcagccggccaaaagccacgcggccggcgcgttgaacacgcgatcc
gccagcagcccggttcccggctccttgcagttctcgcacagttcgctggagcacatgtcc
agcgtgcagtaccctcccattttggtcaccaacagtcacggcgcttccgtcacctacggc
gagcagttcccaaagtacgactcggtcagcgaccacggctactattcgctgcgcagcgac
ttttccaccatgagcatgagcagcgtgcacaacgtggacagtttctgtagcatggagcac
gagcacgtcgcgtgccagagaagccgcagccgctgcgccgagtcctgcctcggccactcc
aacagcgactcgttctcctcctacggcgatccgtacccgggctccgcggacgggagcctg
gaggagagcctgaagggccagcagcagccgccgtccgcctcgacgggcagaatgcagact
tactcccgcggcttccgccgcgaggggctcacgagggtgcagacttacgggccggaggag
cccaagcagggtccgtgcaagcagctcacgccgcacgtccagcacgcgacggtcggggcc
cggtccagctgccctggcgactaccccgtggcgcagagcggcctgccgccgttgtcctcg
cagccgacgcgctcgctgggcatgacccgcatggacagcgtgtccgattcccggctgtac
gacagcaacccgatgaggcagaggcggccgccgctgtgccgcgagcagcacgccagctgg
gaccccctgccgtgcgccaacgaatcttacggctaccactcgtacccgctgagtggcagc
ctcatgccgtgctgcgagcgggtgatggttcgcagcatgcccgacaagatggagcagatc
tggaactcgccgtgggagagcccgcccgccgccgagcaccagcaacggtacgtcatcccc
gagcaccaatatcagacttatcggaacctttgcaacatttttcccgcctacgtggtccat
tcggtgatggagaagaacccgcatttgacggacccccagcaactggcggccgtcatcgtt
acaaatttgaggtcttgtcactga
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