Syngnathoides biaculeatus (alligator pipefish): 133492101
Help
Entry
133492101 CDS
T09681
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133492101 (zc3h13)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
133492101 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
133492101
NCBI-ProteinID:
XP_061660040
LinkDB
All DBs
Position
2:39099973..39144616
Genome browser
AA seq
1780 aa
AA seq
DB search
MRSPRSCRMSKIRRKVTVENTKTISDSSSNTATSGTSNPAAPSRRPSVFERLGPSTGNNA
AESHCRNWLKTGNCSYGNTCRYTHGTQPRGKGFNFSRSSDRPTGDLRERMKNKRQDNEPE
SVKRDLDEPASPIGRQRDSSRGRHREKEDIKITKERTPASEEEPIEWETNREDSDIGDYD
YELSLEMKRQKIQRELMKLEQENLEKREEIVIKKDENTTKARSSVMQKASPDLLRSRDSP
TPRKSSGSPKQKSGVKGSGKKEKKASGSSPVTETVKMLKASHSKKKGPRTPSPPPPLPLD
IPVVVKKHKGKHKNKEKCEEKQKEGKDRGRDIEKHKEKKEKRRDRSDSSHKAKRSVTSEE
HSRSVSPSLSVRKKSSSPKASSHKAAILPSPRRSPSPPRHQRTPITPHHHSPSSRSDSSP
HRHSSSPCRRRSSSPTYHRSSTVVASSPPRSHRSRSPATSQDASSPHRRSNKSSPALHHS
RGRDKSRGDRERSPHTQERRHERRDETRRKVDKDNNRDDWDMESEQVLSRDSRDDRETRD
ARERRDGRDRGRETTREARDRKDVKETRESRTETRSNRESLERRDREREKEREREREKEK
ERDRMDTLRKEEITQEDRSYGRAHGRDEGGREGRTETRPERNSRGRGREFSDKGSNRNSR
GCQLDSSHDNWESRSSGARERSTERNATERGSDRDRREQVRDSSYDRRGGHSDRDRRDNR
ERDPRAASPNRHQRRSEESEREERRDERRSDRGEERREDRSRDRERDREREREREKDRER
EREKEREAERERNREREREREREREREREREEREREREERERERKEREREREQRERERQR
EWEERGREERRDRREDTRDDRAIRETRDDRKTSRKRPRLDASPSPRPSPKRGTRDHSPAD
SDGYNSTDEKSERPIGRGLAKLHPQPLLPSPLCPSSSDSGDKHRVLSQVVRPSEPLLRSP
LRAATSDDKPGHWKDEERRGAADKREARSRHDDQEPRAERTRGSDRRAEQLPDMHSESRS
QGRDSTPPPVSVAPSADNEDRDVTVSHPQEDSKKKTKSLRKGLKKGRKDEETSGGKGLIG
DRFDTDPPPAVLPDGPPSLLSPRKGAKRKVVERKRKRRGDSEASEEDSSVHLPQNKRKRG
PRTPPPSIRPGHRGTGGNAEPSQLPKMDNFSDWSDEEVLDRRGQLDSASAERALPEPLRR
GVGPRLGRDRDRCNPPPIAPLLLQEPPMLLQTLTPQPLMSQPLLRKPPPEQTRSSSMGSN
QSRTSSRRPRSPSNESAHRDDLLGSRARRGRPQGNSAHDRERERERERLEVNDPPGTERK
SRIDQLRRGEPSRSNSSDRQDSRSHSSRRSSPDSERQARSQSRAGSYDSRERERDREQFD
RERDRKDPRQQQSGLLLQQPLQQQRDWDPESRDWPSRGREPLPIRPGREPLLRERDIRDR
ERLLPEGLIQQHDRERERERERDRESRAERGSDRERERIMMLDLPSLSDSRAAGRSDLMR
QDRGDYEPLLPREAFSPAESEKPSNSHHVVSEQSAIERIDSIDGEDDGKEDDSQSVASVG
EEYEPISDDELDEILADSQKKEDPQDEEKMTGPLDVIDVDWSSLMPKQKPEPRAAGAALL
RFTPGAVLLRAGVSKRLAGTALLEKVKEVCKAELDDPKDGDKLFEHDLGALNMAALNRRV
ERAGLLSNLGPCCKALCARRDFGIRRQLLKNDKGLTKQYPMNPVVDSELLQMSMRLFRRT
VTGQTSVPERSDSDSDPALEDPPAASISKLAAGAQEVCVS
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctcctcggtcctgcagaatgtccaagatcaggcggaaggttacagttgagaat
acaaaaacaatatccgatagcagcagcaacaccgcaaccagcggcaccagtaaccctgcc
gccccctcgcgccggcccagcgtgtttgaaagactcggaccaagcactggaaataatgct
gctgaaagtcactgtagaaattggctgaagacgggaaactgcagttacggcaacacttgt
cgctacacacatggaactcaaccacgaggcaaaggatttaacttcagccggtcatcagac
agacccactggcgacttgcgggagaggatgaagaataaaagacaggataatgagccagaa
agtgtaaagcgtgatttggatgagccagcatctcccataggaagacagagagactcctcc
agaggccgacacagagagaaggaggatatcaaaattactaaggagcgtacccctgccagc
gaagaagagcccatagagtgggaaacaaaccgtgaagactctgatattggtgattacgat
tacgaattgtcccttgagatgaaacggcagaagattcaacgtgagcttatgaaattggag
caggaaaatttagagaagagagaggaaattgtcatcaagaaagatgagaacaccactaaa
gcaagatcctccgtcatgcaaaaagcttcccccgatctgttacgctcacgagactcccca
acacccaggaagtccagtggttctcctaaacaaaaaagtggtgttaaaggatcggggaag
aaagagaagaaagcatctggatcttcacctgttacagaaactgtcaaaatgttgaaagca
tctcacagtaagaagaaaggtcctcgtaccccgagtcctccacctccattacccctggac
atcccagtagttgtaaagaagcacaaaggcaagcacaaaaacaaagagaagtgcgaagag
aaacagaaagaagggaaagaccggggacgtgatatagaaaaacacaaagaaaagaaggag
aaacgcagggaccgatctgacagttctcataaggccaagcgctcagtgacctctgaggag
cattctcgtagtgtgtcaccttcactctctgtgaggaagaagtcctcctctcccaaagct
tcttcacataaggctgctatactgccgtctcctcgcagatctccatcacctccacgccac
cagcgcacgcccataacgccccaccaccactctccgtcctcccgttcagactcttctccc
catcggcattcgtcttctccttgccgccgccgctcgtcctctcctacctaccaccgcagc
tccacagttgtggcctcttctccgccaaggtcccaccgctctcgttctccagccacctct
caagatgcctcctccccacaccgtcgatctaacaaatcgagtccagctctgcaccactct
agggggcgtgacaaaagccgtggtgacagagagaggagtccccacactcaggaacgcaga
catgagcgcagagatgaaacccgcagaaaagtagataaggacaataaccgcgatgactgg
gacatggagtcagagcaggtcttgtcaagggacagccgtgacgatagagagactagagat
gccagagaacgacgggatggccgagaccgaggacgcgaaacgaccagagaggctcgtgat
cgcaaagatgtaaaggaaactagagaaagcaggactgaaacgcgctccaatcgagaatca
ctggaacgacgagatcgagagcgtgagaaagagagggaaagggagcgggaaaaagagaaa
gagagggacaggatggacacccttaggaaggaggaaataacacaggaggacaggagttat
ggaagagctcatgggcgtgacgaaggtggaagagaaggacgaacagagaccagaccagag
cgaaacagtcgtggaaggggacgtgaattctcggacaaaggctcgaacaggaactccaga
gggtgccagctagacagcagtcatgacaattgggagtcccggagtagtggcgcacgggaa
cggagcacagaacgcaatgccacagaaagaggttcagaccgagacagaagagaacaagtc
cgagactcttcttacgacaggagaggtgggcacagtgacagagaccgcagagataatcgt
gagagagatccaagggcagcttccccaaacagacatcagagaagatccgaagaatctgag
agggaggagagaagggatgagcgccggagtgaccggggagaagaaagacgggaggaccgg
agtagagaccgtgaaagagaccgggagcgagagagggaacgggagaaagacagggagcgc
gagagggaaaaggagagggaggccgaaagggagcgcaacagggagcgagagagagagcga
gaacgggagcgtgagcgagaacgggagcgtgaagaaagagagcgagagagagaggaacgt
gagagagagcggaaggagcgtgaaagggagcgggagcagcgggagcgagagaggcagcgg
gaatgggaggagcggggaagggaagaaaggcgggacaggagggaggatacccgggatgac
cgtgccattcgagagacaagagatgatcgcaaaacaagtcgcaaacgaccccgattggat
gccagcccaagccccagaccttctcccaagcgagggacgcgtgaccacagtcctgcagac
agtgatggctacaacagtacagatgagaaaagtgagcgtccaattggccgagggctggcc
aagctccacccacagcccctcctccccagccctctgtgtccatcttcaagtgacagtggg
gataagcatcgtgtgctcagtcaagtggtccgcccctcggagccactgttgcggtcacca
ttgagggctgcaacatctgatgacaagcccggccactggaaggatgaggagcgcagagga
gctgcagataagagggaagcacgcagccgccatgacgaccaagagccccgagctgaacga
actaggggaagcgaccggagagctgaacagttgccagatatgcactcggaatctcgtagc
caaggccgtgactccacgccacctcctgtttctgtggctcctagtgctgacaatgaagac
agagatgtcactgtgtcacacccccaagaggacagcaaaaagaagacgaaatcactgagg
aagggcttgaagaaagggcgcaaagatgaagaaacaagtggtggcaaaggtctaattgga
gaccgtttcgacactgatcccccgcctgctgttcttccagatggtcctccatcactcctt
tcaccaaggaagggagcaaagaggaaagtggttgagcgaaagaggaaacggagaggagat
tctgaggcatcggaggaggattcctcagtgcatttgccccagaataagaggaagagaggt
cctcggaccccacctccctcaataagacctggtcatcggggcaccggaggcaatgctgag
ccctcccaactacccaaaatggacaacttcagtgattggtcggatgaggaggtcttagat
cgacgaggacaattggattctgcttctgctgagcgggctctacctgagcctcttcgtaga
ggtgttggccccaggttggggcgggacagagaccggtgcaacccccctcccattgctcct
ctgcttctacaggaacctccgatgttgctgcagacattgactccacagccccttatgtct
cagcctcttctccgcaagcctcccccagaacagacacgcagcagcagcatgggaagtaac
cagagccgcacgtcatccaggcgcccacggtcgccctccaacgagtctgcccatcgagat
gatctcctgggatcgcgtgcccgcagggggcgcccccaaggcaacagtgcacatgaccgg
gaaagggagagagaaagagagcggctggaagttaatgacccaccgggaacagagaggaaa
tcacgaatagaccagttgaggagaggagagccaagccgcagcaactcttcagaccgccag
gattctcgcagccacagctccaggcgtagctcccctgattctgagaggcaagccaggtcc
caatcacgtgctggctcttatgacagtcgagagcgggagcgtgacagggagcaatttgat
cgagagcgagaccgaaaggacccccggcaacaacagtcaggcttacttctccagcagcct
cttcaacaacagagagactgggatcctgaatccagggactggcccagcaggggacgagag
cctctacccatacgtcctggccgtgaacctcttctcagagagagggacatcagggacagg
gaacgcctactgccggaaggactcattcagcagcatgaccgagaaagggagcgtgagaga
gaacgggacagagagagcagagctgaaagaggcagcgatagagagagggagagaattatg
atgctagacttgccctccctgtctgactccagagctgcaggacgaagtgacctgatgcga
caagataggggtgactatgagcccctcctgccaagagaagccttcagccccgcagaatct
gagaaaccaagtaacagccaccatgtcgtgagtgagcagtcagcgattgagaggattgac
agcattgacggagaggatgatgggaaagaagatgacagtcagtcagtggcatctgtcgga
gaggagtatgaaccaatcagtgacgatgagcttgatgaaattctggctgacagtcagaaa
aaagaagacccacaagatgaggagaaaatgacaggccctctggatgtcattgatgtggac
tggtccagtttgatgcccaaacagaagccggagccccgagcggccggagcagctctgttg
cgcttcacaccaggggctgttctcctcagggctggcgtctcaaagcgacttgctgggact
gcgctcctggagaaggtcaaagaagtctgcaaggctgagctggatgaccccaaagatggc
gacaagctgtttgagcatgaccttggggctttgaacatggcagccctgaacagacgggtg
gagagggcaggtttactcagtaacctggggccctgctgcaaggctctctgtgcccgcagg
gactttggcatccgcaggcaactcttgaaaaacgacaagggtctcaccaaacagtatccg
atgaatcctgtggtggacagcgagctgctacaaatgagcatgcgtctttttaggagaact
gtgactggtcagacttctgtcccagaaagatctgacagtgattcagatccagctcttgaa
gatcctcctgcagccagcatcagcaagctggctgctggagcgcaagaggtttgcgtgtca
tga
DBGET
integrated database retrieval system
