Syngnathoides biaculeatus (alligator pipefish): 133492106
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Entry
133492106 CDS
T09681
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03030
DNA replication
sbia03410
Base excision repair
sbia03420
Nucleotide excision repair
sbia03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133492106 (rfc3)
03410 Base excision repair
133492106 (rfc3)
03420 Nucleotide excision repair
133492106 (rfc3)
03430 Mismatch repair
133492106 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbia03032
]
133492106 (rfc3)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133492106 (rfc3)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133492106 (rfc3)
DNA replication proteins [BR:
sbia03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133492106 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
133492106 (rfc3)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
133492106 (rfc3)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133492106 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
133492106 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
T4SS-DNA_transf
DUF2247
ABC_tran
DUF4646
Motif
Other DBs
NCBI-GeneID:
133492106
NCBI-ProteinID:
XP_061660043
LinkDB
All DBs
Position
18:14487025..14493137
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLGKLDYHKEQASQLKSLVQDGDFPHLLVYGPSGAGKKTRIMCLLREVY
GPGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDVGNQDRVVIQELIKTMAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMATCRLILYANSTSKVIGPIRSRCL
AIRVPLPSTEEVCHVLTSVCKKEGLVLPPELAKRICDKSGRNLRKALLMCEACRVQQYPF
SPNQDVTETDWELFLRETANAIVTQQTPQRLFEVRGRLYELLTHCIPADVIMKGLVRELL
NNCDGHLKPEVAHMAAYYEHRLQLGNKAIYHLEAFVAKFMAVYKKFMEDGLDAMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggataaatatcgacccacgtcgctcggcaaactcgactaccacaaa
gaacaggcgtcccagctcaagagcctggttcaagacggcgacttcccccacttgctggtc
tacgggccttcaggcgcgggcaagaagacgcgcatcatgtgtctgctgagggaggtctac
ggccccggcgtggagaagcttcgcatcgagcaccagaccatcgtggctccctcgaagaag
aagattgagatcaacaccatcgccagcaactaccacctggaggtcaaccccagtgatgta
ggcaaccaggaccgtgtggtgatccaggagctgatcaagaccatggctcaatctcagcag
atccagtccagcacgcagagagagtttaaagtggtcctgctcactgaggtggaccggctg
accaaggacgcccagcacgctttgcggcgcaccatggaaaagtacatggccacctgccgc
ctgattctttacgccaattccacctccaaggtcatcgggcccatacgcagccgctgcctg
gcgatccgcgttcccctgcccagcacggaggaggtgtgtcacgtccttacgtcggtgtgt
aagaaagagggcctcgtcctgccgcccgagctggccaagcgcatctgcgacaagtcgggg
cgcaacctccgcaaagccctgctgatgtgcgaggcctgcagggtgcagcagtaccccttc
tcgccgaaccaggacgtcacagaaactgactgggagttgttcctccgagaaacggccaac
gccattgtcactcagcagacgccacagagactgttcgaggtgagaggtcgtctgtacgag
ctgctgactcactgcatccctgccgatgtcatcatgaagggtttggtgagggagcttctg
aacaactgcgacgggcacctgaagcccgaggtggcgcacatggcggcgtactacgagcac
cggctgcagctgggcaacaaagccatctaccacctggaggccttcgtcgccaagttcatg
gccgtctacaagaagttcatggaggacggcctggacgccatgatgttctga
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