Syngnathoides biaculeatus (alligator pipefish): 133492420
Help
Entry
133492420 CDS
T09681
Name
(RefSeq) polypyrimidine tract-binding protein 2-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133492420
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133492420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_PARP14_3
RRM_ACIN1
GlcNAc-1_reg
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
133492420
NCBI-ProteinID:
XP_061660542
LinkDB
All DBs
Position
19:11125712..11229010
Genome browser
AA seq
645 aa
AA seq
DB search
MVTLSSAPSAMSHLLSKWQLNRTTIEVSVAYSRQYFAKCVGLVQESSKEKSQLFHARICT
RFWTDQDAMSELRRNVGDRCKKSLTLHELHIEIRHDKMLESYCACKAGQSCQLWGLEGRP
DEARRKAETADISDVAVGVKRGSDELRMYNSPNSGMSSMSDGSSSGSESKKLRVEEAPPS
RVLHIRKLPNEASETEIIALGLPFGKVTNILTLKGKNQAFLEMGTEDAAITLVNYYTTVV
PHIRNVPVFIQYSNHKELKTDAGNQRTQAVLQAVSAVQSGGSPASDVQEILATASSPVLR
IIIDNMFYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSEPVNAQQAKLALDGQN
IYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPELPAGDGQPTMDPAVAVALSKDNSLLG
KIPGALNPLSAAAVAAAAAGRVALAGQAGSSGVLLVSNLNEEMVTPQSLFTLFGVYGDVQ
RVKILYNKKDSALIQMSDANQAQLAMSHLNGQKMYGKIIRATLSKHQTVALPRDGLDDQG
LTKDYANSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQDVSEDDLRLLFSNAGGTVKAFK
FFQDRKMALIQMSTVEESVQALIDLHNYNMGCNQHLKVSFSKSTI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccttaagctccgccccctccgccatgtcccacctgctttcaaaatggcaattg
aacagaacaacgattgaagtttctgtcgcgtattccagacaatattttgccaaatgcgtc
ggactcgtccaagagagttctaaagagaagtctcaactatttcacgcaaggatatgtaca
aggttttggacggaccaggacgcgatgtcagagttacggcgaaatgttggcgatcggtgc
aaaaaaagtttgacgcttcacgaacttcatattgaaatccgacatgataaaatgctggaa
tcgtactgcgcatgtaaagcagggcagagctgccagttgtgggggttggaaggacgtcct
gatgaggcaaggaggaaggcagaaaccgcagacatcagcgatgttgcagttggagtgaag
agaggatcagatgagctgcgtatgtacaacagtcccaactctggcatgagcagtatgagt
gatgggagttccagtggcagtgaaagtaaaaagctgagggtagaggaggccccaccgtct
cgtgtgctccacatcaggaagctgcccaacgaggcttcggagacagaaattattgctctt
ggcttaccatttggaaaagtcaccaatatcctgacacttaagggaaagaatcaagcgttt
ttggaaatgggtacagaagatgctgccatcacgttggtgaactactacaccactgtagtt
cctcatattcgtaatgtccctgtttttatacaatactcaaatcacaaggagctcaaaacc
gacgccggcaatcagcgtacacaggcggtgctgcaggcggtttcggcggttcagtctggt
gggtcacccgcctcagatgtacaggaaatacttgccaccgcctctagtccagtgctgcgc
atcatcatcgacaatatgttctaccctgtcacactggatgtgctccaacagattttttcc
aagttcggcaccgtcatgaagattatcacttttacaaagaacaaccagttccaggctctt
ttgcagtttagtgaacctgtcaatgcacagcaggccaaactggcactcgatggtcagaat
atctacaatgcgtgctgcacactgcggattgacttctccaagctggtcaatttaaacgtt
aagtataacaacgataagagtcgcgactacacacggccagagctgccagctggcgacggc
cagcccaccatggaccctgctgtggctgttgctcttagcaaagacaactccctccttggt
aagattccaggagctttgaacccactcagcgcagcggcggtagctgctgcagctgcagga
agggtggcactagctgggcaggcagggtccagcggggtgctgttggtcagcaatctgaac
gaagagatggttacgccccaaagtctgtttaccctcttcggagtctatggtgatgtccag
agggtgaaaattctttacaataagaaagacagcgctctcattcagatgtcagacgccaac
caggctcagttagccatgagccacttgaatggccaaaagatgtacgggaaaattattcgg
gcaacgctgtccaaacaccagacggttgcactgcctcgtgatggcctggacgaccagggc
ctgaccaaggactatgccaactctccgcttcatcgcttcaagaaacccggatccaagaat
ttccagaacattttcccgccatctgccactctccacctttccaacatcccgcaagatgtg
tcagaggatgacctgcgattgcttttctccaacgccggaggcactgtgaaagcatttaag
tttttccaggatcgtaaaatggccttgatccagatgtccacagtggaagagtcggtccaa
gccttgattgaccttcacaactacaacatgggatgcaaccagcacctaaaagtttccttc
tccaagtccaccatttaa
DBGET
integrated database retrieval system
