KEGG   Syngnathoides biaculeatus (alligator pipefish): 133492455
Entry
133492455         CDS       T09681                                 
Name
(RefSeq) poly(U)-binding-splicing factor PUF60 isoform X1
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133492455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sbia03041]
    133492455
Spliceosome [BR:sbia03041]
 Complex A
  U2 snRNP components
   U2 related factors
    133492455
 Complex B
    133492455
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_10 DUF1543
Other DBs
NCBI-GeneID: 133492455
NCBI-ProteinID: XP_061660634
LinkDB
Position
19:complement(14495206..14505242)
AA seq 530 aa
MTMENGQGTGSKLGLPPLTPEQQEALQRAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMA
AVTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMS
WDSVTMKHKGFAFVEYDVPEAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEE
ARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCMLARDPTSGRHRGFGFIEYEKPQSAV
DAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPAAAVAAAAATAKITAQASMNP
FQRDLMAFQEAVAGASVLGALAAPQLLSQQMGIPQAVMAAQAPGVITGVTPVRPPIPVLP
QVGLVNPVLASPPVLSNQALATAQLQEKKEEKEETLQDGTGQEMLSDQEHMSISGSSARH
MVMQKLLRKSESTVMVLRNMVGPEDIDDDLEGEVTEECGKFGSVNRVIIYQEKQGEEEDA
DIIVKIFVEFSMASEMNKAIQALNDRWFGGRKVVAEVYDQDRFNSSDLSA
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgacgatggagaatggacagggcacaggctcaaagcttggcctgccgcccctcacccca
gagcagcaggaggcgctgcagcgggcaaagaagtatgccatggagcagagcattaagagt
gtcttggtgaaacagaccattgcccaccagcaacagcagctcaccaatttgcagatggca
gcagtgactatgggctttggagatcctctctcacctttacaatcggttgcagcccagcgg
cagcgcgctctcgccatcatgtgccgggtgtacgtgggctccatttattacgagctcggc
gaggacaccatcagacaggcctttgctcccttcggccccatcaagagcattgacatgtct
tgggactcggtgacgatgaagcacaagggctttgcctttgtggagtacgacgtgccagag
gctgcccagctggctctggagcagatgaattccgtcatgttgggtgggcgaaacattaag
gttgggcggccaagtaacatcggtcaggcgcaacccatcattgaccagctggcagaggaa
gcgcgcgcttttaaccgcatctacgtggcgtcggtgcaccccgacctgtcggacgacgac
atcaaaagtgtgtttgaggctttcgggaggatcaaatcttgcatgttagcccgagacccc
acctcagggcggcacagaggcttcggcttcatcgagtacgaaaagcctcagtcggccgtg
gacgccgtgtcttctatgaacctctttgacctggggggtcagtacttgcgggtcggcaag
gcggtcacccctcccatgcccctcctcacccctaccactcccggcggcctgccgccggca
gccgccgtggccgccgcggcggccactgccaagattacggcccaggcaagtatgaatccc
ttccaaagggatttaatggccttccaggaggccgtagctggcgcgtcagtcctgggggcg
ttagctgcgccccagctactcagtcagcagatggggataccgcaggccgtcatggccgcg
caggcgcccggcgtcatcacaggagtgactccagtgcgaccccccataccggtcctcccc
caggtgggcctggtgaaccccgtgctggcgtcgccgcccgtcctctccaatcaggcactg
gccactgcccagttgcaggagaagaaggaggagaaagaggagacgctccaggacggcacg
gggcaggagatgctgagcgaccaggagcacatgagcatctcgggaagcagcgccagacac
atggtcatgcagaagctgcttagaaagtcagagtccacagtaatggtcctgcgcaatatg
gtgggcccggaggacatcgacgacgacctggaaggggaagtgaccgaagagtgcggcaag
tttggctcggtcaaccgcgtcatcatctaccaggagaaacagggcgaggaggaggacgcc
gacatcatcgtcaaaatcttcgtggagttttcgatggcgtcggagatgaacaaagccatc
caggcgctcaacgaccgctggttcggggggcgcaaggtggtcgccgaggtgtacgaccaa
gatcgcttcaacagcagcgacctgtcggcgtga

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