Syngnathoides biaculeatus (alligator pipefish): 133492468
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Entry
133492468 CDS
T09681
Symbol
abcf2b
Name
(RefSeq) ATP-binding cassette, sub-family F, member 2b
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbia03009
]
133492468 (abcf2b)
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
133492468 (abcf2b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_15
AAA_28
MMR_HSR1
AAA_22
RsgA_GTPase
AAA_23
AAA_16
VapE-like_dom
AAA_33
AAA_14
NACHT
Dynamin_N
RNA_helicase
DUF7365
ATP-synt_ab
AalphaY_MDB
MukB
Motif
Other DBs
NCBI-GeneID:
133492468
NCBI-ProteinID:
XP_061660671
LinkDB
All DBs
Position
19:complement(14575851..14582805)
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AA seq
612 aa
AA seq
DB search
MPSDLAKKKAAKKKEAAKARQRTKKPDEMNGEAERAESRPNGAVSNGVDGLTKELDEFEL
AKTEARAVTGVLASHPNSTDVHISSLSLTFHGQELLVDTSLELNSGRRYGLIGLNGTGKS
MLLSAIGHREIPIPEHIDIYHLTREMATSEKTALHCVMEVDEQRIMLEKEAERLAHEDSE
CEKLMELYERLEELDADKAEVRASRILHGLGFSAAMQQKKLKDFSGGWRMRVALARALFI
KPFMLLLDEPTNHLDLDACVWLEEELKSFKRILVLISHSQDFLNGVCTNIIHLHQRKLKY
YTGNYDQYVKTREELEENQMKRFNWEQDQIAHMKNYIARFGHGSAKLARQAQSKEKTLQK
MVASGLTEKVVNDKTLSFYFPPCGKIPPPVIMVQNVSFKYGDNMPHIYKNLEFGIDLDTR
VALVGPNGAGKSTLLKLLMGELLPTDGMIRKHSHVKIGRYHQHLTEQLELDLSPLEYMMK
CFPEIKEKEEMRKIIGRYGLTGKQQVSPIRNLSDGQKCRVCFAWLAWQNPHMLFLDEPTN
HLDIETIDALAEAVNEFDGGMMLVSHDFRLIQQVAQEIWVCEKQTITKWNRDILAYKEHL
KSKIEKQQAHDI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgccttcggatttagccaaaaagaaggcggctaagaagaaggaggccgccaaggcccgg
cagcgcaccaagaagccggacgagatgaacggcgaggccgagcgggcggagagccggccc
aacggggcggtcagcaacggcgtggacggcttgaccaaggagctggacgagtttgagctc
gccaagacggaggcccgggcggtgacgggcgtgctggcctcgcaccccaacagcaccgac
gtccacatcagcagcctgtcgctcaccttccacggccaggagctgctggtcgacaccagc
ctggagctcaactcgggccggcgctacggcctcatcggcctgaacggcacggggaagtcc
atgctgctctcggccatcggccaccgcgaaattcccatcccggagcacatcgacatctac
cacttgacccgggagatggcgaccagcgagaagacggcgctgcattgcgtcatggaagtg
gacgagcagaggatcatgctggagaaggaggcggagcggctggcgcacgaagactccgag
tgcgagaagctgatggagctgtacgagcgtctggaggagctggacgccgacaaggcggag
gttcgggcctcgcggatcctccacggtctgggcttcagcgccgccatgcagcagaagaag
ctgaaggacttcagtggcgggtggaggatgcgcgttgcgctcgccagagcgctgttcatc
aaacctttcatgttgctgctggacgagcccaccaaccacttggacctggacgcctgcgtg
tggttggaggaggaactcaaatccttcaagcgcatcctggtgctgatctcgcactctcaa
gacttcctgaacggcgtctgcaccaacatcatccacctgcaccagcggaaactcaagtac
tacacggggaactacgaccagtacgtgaagaccagagaggagctggaggagaaccagatg
aagcgcttcaactgggagcaggaccagatagcgcacatgaagaactacatcgcccggttc
ggtcacggctcggccaagctggcccggcaggcgcagagcaaagagaagacgctgcagaag
atggtggcctcgggcctgactgaaaaagttgtcaatgacaagacgctgtcattttatttt
cctccctgtgggaagatcccccctcctgttatcatggttcagaacgtgagcttcaagtat
ggtgacaacatgccgcatatatacaaaaacctggagtttggtatcgacttggacacccgg
gtggctctggtggggcccaatggtgccggcaagtccaccctcctcaagctgctcatggga
gagttgcttcccacagacggcatgatccgcaaacattctcacgtcaagatcggcagatat
caccagcacttgacggagcaactggaactggacctgtcacccctggagtacatgatgaaa
tgtttccccgagatcaaggagaaagaggagatgaggaagatcatcggccgctacggactg
acggggaagcagcaggtgagccccatccgcaacctgtcggacgggcagaagtgccgcgtg
tgcttcgcctggctggcctggcagaacccgcacatgctgttcctggacgagcccaccaac
cacctggacatcgagaccatcgacgcgctggccgaggccgtcaacgagttcgacggcggc
atgatgctcgtcagccacgacttcaggctcatccagcaggtggcccaggaaatctgggtg
tgcgagaagcagaccatcaccaagtggaaccgcgacatcctggcgtacaaggaacacttg
aaatccaagatcgaaaagcagcaagcgcatgacatttaa
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