Syngnathoides biaculeatus (alligator pipefish): 133492705
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Entry
133492705 CDS
T09681
Symbol
tmtopsb
Name
(RefSeq) teleost multiple tissue opsin b
KO
K04256
c-opsin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbia01009
]
133492705 (tmtopsb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
sbia04030
]
133492705 (tmtopsb)
Protein phosphatases and associated proteins [BR:
sbia01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133492705 (tmtopsb)
G protein-coupled receptors [BR:
sbia04030
]
Rhodopsin family
Vision
Opsin
133492705 (tmtopsb)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
TctB
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Sri
7TM_GPCR_Srh
FA_desaturase
Motif
Other DBs
NCBI-GeneID:
133492705
NCBI-ProteinID:
XP_061661262
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All DBs
Position
19:17079168..17091264
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AA seq
396 aa
AA seq
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MIDSSNVSLSCAQCPAASAAVAEASGSTPPPPPPPPSSSSSSSSSSSLSPTGHAVVAACL
GSIGTLGFVCNSVVLAMFLRYRALRTPINLLLVSISVSDLLVSVLGTPFSFAASLRGRWL
IGRAGCVWYGFVNACLGIVSLISLAVLSYERYCTMTVPNMADGRDFRPALGGICFSWLYS
MAWTVPPLLGWSRYGPEGPGTTCSVDWRSQTANNVSYVLCLFAFCLVLPFGVIVFSYGKL
LLAIRQVRSRTSLVTRRRERRVLLMVLTMVVCYLVCWLPYGVVALMATLGPGDPLGPEAS
VLPSLLAKSSTVVNPFIYIFMNKQFYRCFRAFFRCSDVEPRSSLKTFSRATKTLRSVRPE
LRECPPSSARASAPPPPPPPTTRPGPKLTLVAHYRK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatcgactcgtccaacgtgagcctgagctgcgcgcagtgcccggccgcgtccgccgcc
gtcgcggaggcgtcgggctcgacgccgcctccccctccgccgccgccgtcgtcgtcgtcg
tcgtcgtcttcgtcgtcgtcgctcagcccgacgggtcacgcggtggtggcggcgtgcctg
ggctcgatcggcactctgggcttcgtgtgcaactctgtggttctggccatgttcctgcgc
taccgggcgctgcggacgcccatcaacctgctgctggtcagcatctcggtcagcgacctg
ctggtcagcgtgctcgggacgcccttcagcttcgcggccagcctccgcggccgctggctg
atcggacgcgccggctgcgtgtggtacggcttcgtcaacgcctgcttgggcatcgtgtcg
ctcatctcgctggccgtgctgtcctacgagcgctactgcaccatgacggtacccaacatg
gcggacggccgcgacttccgcccggcgctgggcggcatctgcttctcctggttgtactcc
atggcctggacggtgccccccctgctgggctggagccgctacggccccgagggtcccggc
accacgtgctcggtggactggcgctcgcagacggccaacaacgtctcgtacgtgttgtgc
ctgttcgccttctgcctggtgctgcctttcggcgtcatcgtcttctcctacgggaagctg
ctgctcgccatccgacaggtgcgcagccgcacctcgctggtgacgcggcggcgggagcgg
cgggtgctgctcatggttctgaccatggtggtctgctacctggtctgctggctgccttac
ggcgtggtggccctgatggccaccctggggcccggcgaccccctcggcccggaggccagc
gtcctgccgtcgctgctggccaagtcgtccacggtggtcaaccccttcatctacatcttc
atgaacaagcagttctaccgctgtttccgggccttcttcagatgctccgacgtggagcca
cgctcgagcctcaaaaccttctccagggcgaccaagacgctgcgcagcgtgcggccggag
ctccgcgagtgcccgccgtcctccgcccgggcctcggcgccgccgcctccgcctccgccg
acgacccgtcccggacccaaattgactctggtggctcattacagaaagtga
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