Syngnathoides biaculeatus (alligator pipefish): 133492764
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Entry
133492764 CDS
T09681
Symbol
lama1
Name
(RefSeq) laminin subunit alpha-1
KO
K05637
laminin, alpha 1/2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133492764 (lama1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133492764 (lama1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133492764 (lama1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_II
Laminin_G_3
CLU_N
Motif
Other DBs
NCBI-GeneID:
133492764
NCBI-ProteinID:
XP_061661394
LinkDB
All DBs
Position
19:complement(17972363..18005742)
Genome browser
AA seq
3073 aa
AA seq
DB search
MNLLVLLLLMQQTASQQRGLFPAILNLASNAEITSNATCGDPEAEVYCKLVEHVPGRLIK
NPHCPKCDGNSILSKERHPITNSIDGTNQWWQSPSIKNGRQFHWVTITLDLKQIFQVAYI
IIKAANSPRPGNWILERSLDGITFEPWQFYAISDSECLSHYNITPRLGPPTYKSDTEVIC
TSYYSRLEPLEHGEIHTSLINSRPGADDLTSELLNFTSARFIQLRLQRIRTLNADLMTLS
AHDPREIDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDTVTKKLQCVCEHNTCGVTCN
HCCPGYHQKPWQPGTISQGNTCEKCNCHKKASDCFYNQTVADLRLSVNIHGVRHGGGVCI
DCQQNTAGINCETCADQYFRPDQVSPDSEFPCVECDCDLRGAESSICTRDGTLSGVIAGQ
CACKNGFAGRRCDRCAFGFRDFPLCAPCECNLAGSINSDPCDDCICKANVMGGHCDLCKA
GFYNLQGANPLGCTDCFCFGVSDVCESSTWSLVQVVSTNVQLHPSASHHLSRAIMGNGLP
TSGNTSSRHQKRELLWEAPAGFLGNKLSSYGGVLNYSVFYDGSLENMQEFVPVHTDVIIQ
GNWQALRLSPPRLLFLPPLAERSVAIQMIPEQFVDEQKGVQVSRDDLLSVFAEVTSMRVK
IQLNTSTSGAVRLAFVSLDVADSQSASGVQAVAMETCECPWGYSGTSCESCLPGFYRVGG
VLFGGNCMQCECNDHASECDVNGVCQGCSHHTTGPHCNQCLPGFYGDATEGTADDCQRCP
CPLTEASNSFSPTCVLDSSGLVSCDQCQEGYTGSKCHKCSSGFYGNPQVIGGTCVRCQCN
NNVNTEEAGHCDAASGECRRCLYNTTGRHCEICAPGFYGDAIHQKDCQECNCDVNGSLSS
ICDITSGQCACRDNVTGRACDLCRPGFFGLQSGSGCVACDCNLSGSLNELCDDTGRCRCL
DGVDGDKCDHCGRGYFGFHANGCTACTCKHTGGNCHHQTGECLCPVHSTGDTCDRCETGY
WGQDPITGCKPCNCSVEGSAASQCDLTNGQCLCREGFSGRSCELCAPGHYGYPACSPCGC
DIAGTKEDSCNETLGVCDCQRSGECVCKVAVVGRHCQECISGFFALSSDNPDGCSLCFCS
GVSQDCEEHAGLTRSLITMALSPALLPLVSQSNLEGIISGVYQQGGDMLLDTHQLNMSIL
RDPLYWRLPPQFEGHQLLSYGGVLSYVVTFFADNAGGLVNREPQVLMRGGALRTLLIYTE
MVSPDNGIRTQHDIRLTEHKWRYFNSVSEKAVSHSDFLSVLSDLQYILVKASYGTRLRQT
RISNITMETAIKANESESTMRAARLIESCSCPPAYAGMSCQECAPGFFRQPLWELPPQAQ
ESAFVRPCVACRCNNHSSNCHADTGHCQECQHHTRGPNCGQCAQGYYGNVTGSISDCSLC
ACPLQENSFSPTCVSEGNLGEFRCTSCLTGYEGRYCERCSLGYFGNPSLLGGMCTPCSCN
EWGSMHQLCDPLTGQCQCKAGVKGPMCERCDERHIPEGNQCMSCDDECTGPLLNDLDQMH
RSWQSVNISSVALAPYHQLLEFNKQTKDMQLMFSEQISLEIPVSRLEEDSMQLTSDLQIL
LNQTTHVSNAWERMSMSSMELGSSANDSLPFGSQLMENINRIQIQIEALEKEAGQMNGAA
DIERERASRMRLLDQMASILENMRTVNLTMAINLGRQELSLSESLVSSLQLVLLPSLDSM
LRPLTATLNAHVEKLQDAQKRMEDAAKENVKTHIVKNATNALISQYQATYQNVSVGCGFV
ENMMEASQLLLNDVVNMTEEFASIAVQTEILGGELDQWCPLLRKKVDGLVIGLKSTDSLE
MVYRAERCARLLQSDALSPHSSLSSLWNASQNSRQLVVLDADVTDSVSKAWRVASDAHEF
ASLVFNMTKQSEQLLLMEGGPRLSAISAVLSESHSINKTAEDLELAVSLVTTRQQMLSNR
VHSTSILLHQPIRELQSLSNCSLQLEEAHLQAALAHSNLQEALQHVYTFRQQLQDSSSVV
ENMNLSVTETNHLMTRTHSAANEVQRELEEAENRTQHLSEKIKPLSMLGESLSKNLSDIR
ELIEQARRQAASIKVAVQADGECVRSYRPQIQSSNFNTLTLTLKTKRPNNLLFYMGSKTT
VEFLAVEMRNGKVSLLWDVGSGSTRLEYPGLDITNNKWTRINATRLGARGFLSIYQLEAA
PSPTVMARSPGPARVLQIDNSTVIHVGGLADDTQRPAALQWSTFNGCLGEASLNEKNVGL
WNYITRRGQCGGCFSNPQTEETSFHFDGSGFSLIQKSLRATSTSIVLLFKTLSPAGLLLY
LASNNTRDFLSIELVEGYVRLTFDLGSGPLVLASNRKYNNGLWYKVTLQRNRRKGHLSIM
AADQSSEKEVLEAESPGSASDLNRSDLDPIYIGGLPASQPIRRQVVSRSYIGCIKNVEIA
RLNFDLLRDAYGVRKGCVLEAVRSVSMLSSGFVEIAPVSLGQEAEILFSFKSNNQSGVLL
AAIIDNRAQRRHFLSVHLLSGSLEVELGEMGADGRRVAVTGAEGGFFTDGTKHSVIVNIN
RKSLSVQVDEGKAKSALLLPAGLSRLSTASFFIGGLPPGEQVHLPIRLQKISKLFRGCIQ
HLVLGARLVDLSVAVKYVGAELDRCILEEKVGGAVLPEDHDVEPALHPSHLSVAAAPNHL
TPGELTCMPETELTFLPTAAQFGSSRHSHMTFTIEPVSVRKSVSLRLSLRTRARDGLLLL
LSGGNQTDFTILRLAAGRPLISTDLGKGAVTATSAVAVNDGKWHTVSADVSRRSISVSVD
ASTPERVAVKGNQLDVSSKLYLGGLPRVHNTQRINVSTSLAGCVHSVSLNGVMLDLSRPA
SRYDVTSCFSKEEPGSYFNGSGYAALMPNGYKVGSDMSVSLEFRTSRSEGIFLGISSAKV
DAIGLEMIKGQVVFNVNNGAGRVWVASGSPVLCDGRWHHLLARKTKHTLSLIIDGHSNSI
SNPYPQSTSAETNNPVYVGGYPDGVKQNCLSIKSAFRGCLKNVHLVKSHINSPLDMSQAH
FSLGVTPNACPAA
NT seq
9222 nt
NT seq
+upstream
nt +downstream
nt
atgaacttacttgtgttgttgctgctaatgcagcaaacggcttcccagcagagaggtctg
ttcccagccattttgaacctggccagtaacgcagagatcaccagcaacgccacatgtggg
gacccagaagcagaagtttactgcaaattggtagagcatgttccaggacgcttaatcaag
aaccctcactgtccaaagtgtgatggcaactccattctgtcaaaagaacgccatcccatc
acaaactctatcgatggaaccaatcaatggtggcagagtccaagcatcaagaacggccgc
cagttccattgggtcacaattacgctggatctgaaacagatctttcaagtggcttacatc
attatcaaggcagcaaactctcctcgaccaggcaactggattctggagcgttctctggat
ggcataacctttgaaccgtggcaattttatgccatcagcgactcagagtgcttgtcacat
tacaacattacaccgagactcggacccccaacctacaaaagtgacacggaggtcatctgc
acatcatactattccaggctggagcctctggagcatggagagattcacacatcgctgatc
aacagtcgacctggagcggacgatttaacctctgagctcttgaacttcacttcagcccgt
ttcatccaacttcggttacagcgaatccgaacactcaacgctgacctgatgactctgagt
gcacatgaccctcgagaaatcgacccaatcgtcactcggcggtattattactcaataaag
gacatctctgtgggcggcatgtgtatctgctatggacatgcccgaagctgtccgttggac
acagttacaaagaaactccagtgtgtgtgtgaacacaacacctgcggagtgacctgcaac
cactgttgccctggttaccaccagaagccatggcaaccagggacaatctcacaaggaaac
acatgtgaaaagtgtaactgtcacaagaaagcaagcgactgtttctacaatcaaacagtt
gctgatctgagattgagcgtaaacatccacggcgttcgccacggaggcggagtctgtatt
gactgtcagcagaacactgctggaattaactgtgagacctgtgccgaccaatactttaga
cctgaccaggtttctcctgattctgaatttccttgtgtggagtgtgactgtgatttgaga
ggtgcagagtcttccatctgcaccagagatggcactttgtcaggtgttattgcaggtcag
tgtgcctgtaaaaatggctttgcaggccgtaggtgcgaccgttgtgcatttgggttccga
gattttcctctttgtgctccgtgcgagtgtaacctcgctggcagcatcaacagtgatcca
tgtgacgactgcatttgcaaagccaatgtgatgggggggcactgtgacctgtgtaaagcc
ggtttctacaacctgcaaggcgccaacccgctcggctgcaccgactgtttctgcttcggc
gtgtcggatgtctgtgaaagctccacttggtcgcttgtgcaggtggtttccacaaatgtt
cagctccacccttctgcttcccatcacctatcccgggccataatgggtaatggacttccg
acctccggcaacacctcctcccgacaccaaaagcgagagctcttgtgggaggcgcccgcc
ggtttccttggcaataagctgtcttcgtacgggggtgtcctgaactattctgtcttttat
gacgggtcattggaaaacatgcaagaatttgtcccagtccacactgatgtcatcattcag
ggcaactggcaagcgctccgcctctcaccacctcgcctactctttctgccacccttggcc
gagcgctcggttgccatacagatgatcccagagcaatttgtagatgaacaaaagggtgtc
caagttagccgtgatgacctgctatcagtttttgctgaggttacatcaatgagggtgaaa
attcagctaaacacctctaccagtggagctgtgcgcctcgccttcgtgtctctggatgtg
gccgactctcagtcggcatctggtgtccaggcagttgccatggaaacctgtgaatgtcca
tggggctacagcggtacttcttgtgaatcgtgtcttccaggtttttacagggttggtgga
gttttgtttggaggaaactgtatgcagtgtgaatgcaatgaccatgcctccgaatgtgat
gtcaatggcgtgtgtcagggttgtagccatcataccactggtcctcattgcaatcaatgt
cttcctggtttctacggcgatgccacagagggtacagcagatgactgtcagcgttgtccg
tgtcctctgacagaagcgtccaacagtttcagtccgacatgcgtgctggactcttcggga
ctcgtgtcatgtgaccagtgtcaggaaggctacaccgggagcaagtgtcacaagtgttcc
agcggtttctacggcaacccgcaggtaataggcgggacttgtgttcgctgccaatgtaac
aacaacgtgaacacggaagaggcgggacattgtgatgccgccagcggggagtgccgccga
tgtctgtacaacacgactgggaggcactgcgagatctgtgcccctggtttctatggagac
gccattcaccagaaggattgccaagagtgtaactgcgatgtcaacggatctttgtcaagc
atttgtgacatcacatcaggtcaatgtgcatgtcgagacaacgtgacaggacgggcgtgt
gacctctgccggccgggattcttcgggctgcagagcggctcaggctgcgtggcctgtgat
tgcaacctctcaggatctctgaatgaattgtgtgacgacactggacgctgccgatgtctg
gacggtgttgacggagataagtgcgatcactgtggccgtggttactttggtttccatgcc
aacggctgcacagcatgcacttgcaagcacacgggcgggaactgtcaccaccaaactggg
gagtgcctctgtcctgtccattctacaggtgacacctgtgacagatgtgaaacaggatat
tggggtcaagatcctatcacaggttgcaagccttgcaactgcagtgtagaaggaagcgcc
gcctctcagtgcgatctgaccaatggccagtgtctgtgcagagaaggattttctgggagg
tcatgtgaattgtgtgctcccggtcactatggttacccagcatgctcgccatgtggctgt
gacatagcaggaacaaaagaagactcgtgcaatgagacactcggagtgtgtgactgccaa
cgcagcggagagtgtgtgtgcaaggtggctgtggtggggcgacactgccaagagtgcatt
tcgggtttcttcgctctgtcgtcagacaatccggacggctgctctctgtgtttctgttct
ggagtgagtcaggactgcgaggagcatgctggcctcaccagatctcttatcacaatggct
ctctctcctgcacttctcccattggtaagccagtccaacctggagggcattatatctgga
gtctaccagcagggcggcgacatgctactggacacccaccagctcaacatgagcatactg
agagatccactctactggaggctgccccctcagtttgaagggcaccagctgctgtcctac
ggtggggtattgtcctacgttgtaactttctttgcggacaatgccggagggttggtcaat
cgggagcctcaagtgctgatgagaggaggagccttgaggacgctgctcatctacactgaa
atggtatcccctgacaacggcatcaggacccagcatgacatcaggctgaccgagcacaag
tggagatattttaactcggtgtctgagaaggcagtcagtcacagtgacttcctgtcggtg
ctgagcgacttgcagtacatcctcgtcaaggcttcgtatgggacgagactgcggcagacc
aggatttcaaatatcaccatggagactgcaataaaagcaaacgagtcagaaagcacaatg
cgcgcggctcgactgattgagtcgtgttcctgtccacctgcttacgcaggaatgtcatgt
caggaatgcgcgccaggtttcttccgccaaccgctgtgggaattgccacctcaggcccaa
gagtctgcatttgtgcgtccgtgtgtggcatgtcgctgtaacaaccacagcagcaactgc
cacgcagacaccggccactgccaggagtgtcaacatcacaccagagggcctaattgtggt
cagtgtgcccaggggtattatgggaacgtcactggctccattagtgactgttcgctgtgt
gcttgccccctacaggaaaacagctttagtcccacttgtgtgtctgagggaaatcttgga
gaatttcgctgcacttcttgtctaacaggatacgaggggcgctactgtgagcggtgctct
ctgggttactttggtaacccctcattgctgggtgggatgtgcaccccatgcagctgcaat
gagtggggctccatgcatcaactgtgcgacccgctgacgggccagtgccagtgtaaggct
ggggtcaaaggtccaatgtgtgagcggtgcgatgagcgccacatcccagagggaaaccaa
tgcatgtcatgtgatgacgaatgcaccggccctctgctgaatgacttggaccaaatgcac
cggagctggcagtccgtcaacatcagcagtgttgctctggcaccctaccaccagttgttg
gagttcaacaaacagaccaaagacatgcagctgatgttttcagaacagatttctttggag
ataccagtgtccagattggaagaagattccatgcaactgacctctgacctccaaattctg
ttaaatcagacaacacatgtatcaaatgcctgggagagaatgagcatgtcctccatggaa
ttgggctcgtccgccaatgacagcttgccattcggaagtcagctgatggaaaatattaac
aggattcaaatccagattgaagcacttgaaaaggaggctgggcaaatgaatggtgctgct
gacatagagcgagaaagagccagccgaatgcgcctgctggaccagatggcttccatttta
gaaaatatgagaactgtcaatctgaccatggccataaatctgggacgtcaggagctcagt
ctttcagagtctcttgtcagttcgctccaacttgtcctcctgccaagcttggacagcatg
ctccgccccctaactgccaccctcaatgctcatgtggaaaaactgcaagatgcacaaaaa
cgtatggaagatgctgcaaaagaaaacgtgaaaacacacattgtgaaaaacgccacaaac
gctctgatctcccaatatcaggcaacctatcagaatgttagtgttggatgtgggttcgtg
gagaacatgatggaggccagccagctgctgctgaacgatgttgtcaacatgacggaggag
ttcgctagcatcgccgtccagacagaaatattgggaggcgagctcgatcaatggtgccct
ctgctgaggaagaaagtggacggtctcgttattggactgaagagcaccgattcactggaa
atggtttaccgtgcagagagatgcgcccgcctgcttcaaagcgatgctctctctccacac
agctctctgtcatcattgtggaacgcttctcagaacagcaggcaattggtcgtgctggat
gccgatgtcacggatagcgtcagcaaggcctggcgagttgcctcggatgctcacgagttt
gccagtctcgttttcaatatgaccaagcaatcagagcagctgctgttaatggagggcggg
cccaggctgagtgcgatctctgctgtgctcagtgagagtcattcgatcaacaagacagca
gaagacttggagctggcggtgtctctggtaaccacgagacagcagatgctcagtaaccgt
gtgcacagcaccagcatcctcctccatcagccaatcagagagctgcagagcctctcgaac
tgttcattgcagctggaggaggcccacttgcaggctgcactggcacactccaacctgcag
gaggcactgcagcatgtgtataccttcagacagcaactgcaggattcttcttctgtggtg
gaaaatatgaacttgagtgttacggagaccaatcatctgatgacacgcacacattcagca
gccaacgaggtacagcgtgaactggaagaagcagagaatcgtacacagcatttgagtgag
aaaataaagccgctgagcatgctgggagaaagcctgagcaagaacctgtctgatatcaga
gagctcatcgagcaggccagacgacaagcggcgtctattaaggtggcggtacaggcagat
ggagaatgcgtccgatcgtaccgaccccaaattcagtcgagcaacttcaacaccttgact
ttgaccttgaagaccaagaggcccaacaatctgctcttctatatgggcagcaagacaaca
gtggagttccttgcagtggaaatgcgcaacgggaaagtgtctctgctctgggatgtcgga
tccggcagcactaggttggagtatcccggactcgacatcaccaacaacaaatggaccaga
atcaacgccacacggctgggtgctcggggcttcctgtccatctatcagctggaggcggcg
ccatcaccaacagtgatggcaagatcacctggaccggcccgggttctacaaatcgacaac
agtactgtcatccacgttggaggactggcagatgacacccagaggccggcagcgttgcag
tggtccacgtttaacggttgtttgggtgaagcttcgctcaatgagaaaaatgtcggcctg
tggaactacatcacgagacgaggacagtgcggaggctgcttcagcaatccacagacagaa
gagacatctttccactttgacggttccggattctcattgatccaaaagtctctgcgagca
acatcgacatccattgtgttattgtttaaaacgctgtcgccggccggattgctgttgtac
ctggcctccaacaacaccagggacttcctttccattgagctggtggagggctacgtccgt
ctgaccttcgacctagggtctggtcctctggttttggcttccaacaggaagtacaacaac
ggcttgtggtacaaggtcacgctgcaaaggaaccgacgcaaaggtcacctgtcaatcatg
gcagctgaccaatcatcggaaaaagaagtgttggaggcagagtcacctggatctgcttct
gacctgaaccgttctgaccttgaccccatctacatcggaggacttcctgcttctcaacca
atcaggcggcaagtggtctccaggtcctacattggctgcatcaagaacgtggagatagca
aggttaaactttgacctgctaagagatgcgtatggagtcaggaaaggctgtgttctagag
gcagtgcggagcgtgtcaatgttaagcagcggctttgttgagattgctcctgtttcactc
ggtcaagaggcagagattctattctctttcaaatctaacaaccaatctggagtcctcttg
gctgctatcattgataatcgtgcccagcgacggcacttcctgtccgtccacctgctatct
ggttctttggaagtggagcttggggagatgggtgcagacggtcgtcgggttgcagtcact
ggggcggaaggcggatttttcacagatggaacaaaacactcggtcattgttaacatcaat
aggaagtcgctttcagtacaggttgacgagggaaaagccaaatcagccttgttgttacca
gccggactttcccgtctctccacggcctcttttttcattggaggactgcctccaggggag
caggttcatttgccaatcagattacagaagatatcaaagttgttcagaggttgcatacag
cacctggtgcttggtgctcggcttgtcgacctgtcagttgcagtcaaatatgtgggggcg
gagcttgacagatgcatactggaggagaaagtcggaggggcagtgcttccagaagaccat
gatgtagaacccgctcttcacccttcccatctgtctgtcgcagcagcacccaaccatctg
acacctggtgaactcacgtgtatgccagaaacagagttgaccttcctgccaacagcagct
cagtttggatcatcacgacatagtcacatgacttttacgatcgagccagtcagtgtccgc
aaaagcgtgtccctgcgcttgtcacttcgaacccgagctcgggacggtttgttgctgctc
ctgtctggtggcaaccagacagactttaccatcctgcgactggcggccgggcggccactg
atatcaacagacctcggcaaaggtgctgtcaccgccacctccgctgttgccgtgaacgac
ggaaaatggcacacagtaagcgccgatgttagtcggcgctccatttcagtctctgtggac
gcctcgactccggaacgggtggcggttaaagggaaccagctggacgtcagcagtaaactg
tatctgggtggattaccacgcgtgcacaacacccaaagaataaatgtgtccacaagtctc
gcaggttgtgttcactctgtcagtctgaatggcgtcatgctcgatctctctcgaccagcg
tcacgctatgacgtcacttcctgtttcagtaaggaagagccaggaagttactttaatggc
agtggatacgccgcactgatgccaaatggatacaaggttggttcggacatgtctgtgtct
ctggagtttcgaacgagtcgatcagaaggcatcttccttggcatcagcagtgccaaggtg
gatgccattggactagagatgatcaaaggacaggtggtgtttaatgtgaacaacggggcg
ggcagagtgtgggttgcttctggcagtcctgtgctgtgtgatggacgctggcatcatcta
ctggccaggaagaccaaacacactctaagtctaatcatagatgggcatagcaactccatc
agcaatccctacccacaatccacctctgctgagaccaataatcccgtctacgttggcggg
tacccagacggagtcaaacagaattgcctgtcaatcaagtcggcctttagaggatgtctg
aagaatgtccatctcgtgaagtcgcacatcaacagtcctctagacatgagtcaggcccac
ttctcgttgggtgttacccccaatgcatgtcctgctgcttaa
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integrated database retrieval system
