Syngnathoides biaculeatus (alligator pipefish): 133492899
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Entry
133492899 CDS
T09681
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133492899 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133492899 (u2surp)
Spliceosome [BR:
sbia03041
]
Complex A
U2 snRNP components
U2 related factors
133492899 (u2surp)
Complex B
133492899 (u2surp)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
DUF2408
RRM_7
Motif
Other DBs
NCBI-GeneID:
133492899
NCBI-ProteinID:
XP_061661697
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All DBs
Position
19:12380780..12395848
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AA seq
970 aa
AA seq
DB search
MAERTPGGSQKASAKALLESKLKSFSIGKMSVTKRTLSKKEQDEIKKKEDERAAAEIYEE
FLAAFEGGSEGKIKAFVRGGIANATKEEAATDEKRGKLYKPKSRFESQSKSILPLEPPPQ
FPTVDKRHSAKKTSEKEKKKSNLELFKEELKQIQEERDERHKMKGRVSRFEPLGGAEGRR
SFLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERA
RERNCGFVAFMNRRDAERALKNLNGKSIMNFEMKLGWGKGVPIPPHPIYIPPSMMEHTLP
PPPSGLPFNAQPRERLKNPNAPLVPPPKNKEDFEKTLSQAIVKVVIPTERNLLSLIHRMI
EFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYRWKLYTVLQGEAPVKWRTDDFR
MFKNGSLWRPPPLNPYLHGPYDDGEEEEEDEDSLKKGCLKEDERDKLEEMLRGLTPRRGD
IAEAMLFCLTHAEAAEEIVECVTESLSILKTPLPKKIARLYLVSDVLYNSSAKVTNASYY
RKYFEVKLCQIFADLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYPDPFLIKLQNIF
LGLVNLASEKEPVGIPVEQPEPTEDIDGAPIGEYVDGSPIEDVDGLPIDAGPIDGAMIDG
APLDDLDGVPIKPMEEDIDGIPFDQSKEATFKVAPSKWEAVDESELASQAVTTSKWEAFE
QPEEPKRFAENSDDEKSPHAAAAPPSSSNPVRDDADLKPKLSEMNEEKRTKLREIEVKVM
KFQDELESGKRPKKPGQSFQEQVEHYRDKLLQKEKEKEKLEREKEREKKEKEKADAKLKD
LKKEKEKEKEDTPTRKDKYSSPAVERKRRHSTSPSPTRGGGGGRRGRSPSPRSERSERSY
SKDTSSRSSHKDSPRSVVKKSSKRSPSSPRTPKRSRRSRSRTPKKSTKKSRSKSRSPHGR
SHKKSKKSKH
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgaacgccaggaggctctcaaaaggctagtgctaaggcactgctggagagc
aaactaaagtctttcagcatcggcaaaatgtccgtgaccaagagaaccctcagcaagaag
gaacaggatgagatcaagaagaaagaggatgagcgtgcagcggcggagatctacgaggag
tttcttgctgccttcgagggtggcagtgaggggaagattaaagcttttgtccgtggtggg
atcgcaaacgctacaaaagaagaggcagcgacagatgagaaaagaggcaaactgtacaag
cccaagtcccgctttgagtcccaatccaaaagcatcctgcccctggaacccccacctcag
tttccaacagtagacaaacgccattctgccaagaagaccagtgaaaaggaaaagaagaag
agcaacctggagcttttcaaggaagagcttaaacaaattcaggaggagcgggacgaaagg
cacaagatgaaaggacgagttagtcgttttgaacctctgggcggcgcggagggaagacgt
tcatttttggacgactgtgcacccggttcgcacgacgttggcgacccgtctaccactaac
ttatatctaggaaacatcaatcctcagatgaacgaggagatgctgtgccaagagtttggc
cgctacggaccgctggccagcgtgaagatcatgtggccgaggacggacgaggagagggca
cgggagaggaactgtggctttgtggccttcatgaaccggagggatgccgagcgggccctc
aaaaacctcaacggaaagagtatcatgaactttgagatgaaacttggatggggcaaaggt
gtgcccatccccccccaccccatctacatccctccgtccatgatggagcacaccctccca
ccgcctccctcgggcctccccttcaacgcacagccccgcgagaggctcaagaaccccaat
gcccccctggtccctccgcccaaaaacaaggaggacttcgagaagactctgtcgcaagcc
atagtcaaagtggttatcccaacagaaaggaatttgctctctctcatccaccgaatgatc
gagtttgtggtgcgtgaaggccccatgtttgaagccatgatcatgaaccgggaaatcaac
aaccccatgtacaggtttctgtttgagaaccaaagcccagcacacgtttactacaggtgg
aagctctacaccgtactgcagggtgaagcaccagtcaaatggcgaacagatgactttagg
atgttcaagaacggttctctttggcgcccgccgccactcaatccctacctccacggtccg
tacgacgacggcgaagaggaggaggaagatgaggactctctcaagaaaggctgcttaaaa
gaagacgagcgggacaagctagaggagatgcttcgcggcttgacacccagaaggggcgac
atcgccgaggccatgttgttttgtctcactcacgccgaagccgctgaagagatcgtggag
tgcgtcacggagtccctttccatcctcaagacccctctccccaagaagattgcacggtta
tatctggtctctgacgtgctgtacaactcctctgccaaagtaaccaacgcctcctactac
aggaaatactttgaagtgaagctctgccagattttcgcagacctcaacgccacgtataaa
accatccaaggtcacctgcagagcgaaaacttcaagcaacgtgtgatgtcgtgcttccga
gcatgggaggactgggccgtgtatccggaccccttcctcatcaagttgcagaacatattc
ctgggtctcgtgaacctggcgtccgaaaaggagcctgtcgggatccctgttgagcagccc
gagcccacggaggacatcgacggcgccccgataggcgagtacgtggacggctcgccgatc
gaagacgtggacggcttgcccatcgacgccggccccatcgacggggccatgatcgacggg
gcccccctcgacgacttagacggcgttcccatcaagcccatggaggaggacatcgacggg
attcccttcgaccagtcgaaagaggccactttcaaggtggcgccctcgaaatgggaagcc
gtggacgagtcggagctggcctctcaagctgtgaccacctcgaaatgggaagcctttgag
cagcccgaagaaccaaaaaggttcgcagagaacagcgacgacgagaaaagcccccacgcg
gcagcggcccccccgagctcctccaacccagtcagggacgacgcagacctgaagccgaag
ctctccgaaatgaacgaggagaaacggaccaagctacgagaaatagaggtgaaagtcatg
aagttccaagacgagctggaatcggggaagaggcccaagaaacctggtcagagctttcag
gagcaggtggaacattacagggacaagctgctgcaaaaggagaaggagaaggagaaactg
gagcgggagaaagagcgggagaagaaggagaaagagaaagcggacgcaaagctgaaagac
ctgaagaaggagaaggagaaggagaaggaagacacgcccaccaggaaagacaaatactcg
tccccggccgtcgagaggaagcggcggcacagcacctcccccagccccacgcgcggcggc
ggcggcggaagacggggccgctctccgtcccctcgctcggagaggtccgagcgctcgtac
tccaaggacacgtcctcgcgctcctcacacaaggactcgccgcgctccgtcgtcaagaag
tcctcaaagagatcgccgtcatcccctcgcactcccaagcggtcgcggcggtcgcgctcc
cggacgcccaagaagtcgaccaagaagtcccgctccaagtccaggtcgccgcacggccga
tctcacaaaaagtccaagaagagcaaacactga
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