Syngnathoides biaculeatus (alligator pipefish): 133492921
Help
Entry
133492921 CDS
T09681
Symbol
fen1
Name
(RefSeq) flap endonuclease 1 isoform X1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03030
DNA replication
sbia03410
Base excision repair
sbia03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133492921 (fen1)
03410 Base excision repair
133492921 (fen1)
03450 Non-homologous end-joining
133492921 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbia03032
]
133492921 (fen1)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133492921 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133492921 (fen1)
DNA replication proteins [BR:
sbia03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
133492921 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
133492921 (fen1)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
133492921 (fen1)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133492921 (fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_N
XPG_I
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-GeneID:
133492921
NCBI-ProteinID:
XP_061661751
LinkDB
All DBs
Position
19:complement(1409725..1447770)
Genome browser
AA seq
450 aa
AA seq
DB search
MGIHGLAKLIADHAPSAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLEHGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKMLAQAQELGEQ
ESIHKLTKRLVKVTKQHNDECKKLLNLMGVPYLEAPCEAEASCAALVKAGKVFATATEDM
DGLTFGTNILLRHLTASEAKKLPVQEFHFSRILQDINLTNEQFIDLCILLGCDYCGTIKG
IGPKRAIDLIKQHGSIEEILENIDPNKHPAPDDWLYKEARELFLKPEVVDCSTVELKWIE
PDEDGLLHFMCEEKQFSEDRIRNGCKKILKSRQGSTQGRLDSFFSVTGSLSSKRKEPEVK
GSTQKKLKTGATPRNFRKGTRTGPKRHPCPRQEELSPHHEPQVNHELQTARERRGQQPRQ
TPMGVRRRTQAWHTAACSPSPQMRRTERGQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggggattcatggactcgccaaactcattgctgaccacgctcctagtgccataaaagag
caagacatcaagaattactttggccgaaaaattgctatagatgcctccatgtgcatttac
cagttcctgattgctgtgcgacaggatggtaacgtgctccagaatgaggatggagagaca
accagccacctcatgggaatgttctacaggaccatccgcatgctagaacatggcattaaa
cctgtttatgtgtttgatggcaagcccccacagctcaagtcaggagagctagaaaagcga
ggtgagagaagagcggaagctgagaaaatgcttgcacaagcccaggaacttggagagcaa
gaaagcattcataaactcactaaacgtcttgtcaaagtcaccaagcagcataatgatgaa
tgcaagaagctgctgaatctaatgggagtgccttacttagaggcgccgtgtgaggctgag
gccagctgtgcagctctggtcaaagcaggaaaggtctttgccacagcaacagaggacatg
gacggactgactttcggaacaaacatcctgctcaggcacctcacagccagtgaagcaaag
aagcttccagtccaagagttccacttcagtcgcattctgcaggacattaacctgacaaat
gaacagttcatagacctatgtattctgctgggatgcgactactgtggcaccatcaagggg
attggccccaagagagccatcgacttgatcaagcagcacggcagcatcgaggagatcctg
gaaaacattgacccaaataagcaccctgctccagacgactggctctacaaggaggcaagg
gaactatttctgaagcctgaagtggtggattgttccacagtagagctgaagtggattgag
ccagatgaggacgggctgctccacttcatgtgcgaagaaaaacagttcagtgaagacagg
atccgcaatgggtgtaagaagattttaaagagtcggcaagggagcacacaaggacgactg
gattccttcttctcagtcaccgggtcgctgtcatccaaacggaaggagcctgaagtaaaa
ggatctactcaaaagaagctgaaaactggagccacgccgagaaatttcagaaaaggaacc
agaacaggacccaaaaggcatccctgtccaaggcaggaggagctgtcaccccaccatgaa
ccccaagtcaaccatgaactacaaacagcccgagagagaagagggcaacaaccacggcag
actcccatgggagtgaggaggaggacacaggcctggcacacagcagcatgttccccaagt
ccccagatgagacgcacagagaggggccagtga
DBGET
integrated database retrieval system
