Syngnathoides biaculeatus (alligator pipefish): 133492950
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Entry
133492950 CDS
T09681
Symbol
rbbp8
Name
(RefSeq) DNA endonuclease RBBP8 isoform X1
KO
K20773
DNA endonuclease RBBP8 [EC:3.1.-.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133492950 (rbbp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133492950 (rbbp8)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-C complex
133492950 (rbbp8)
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Motif
Pfam:
CtIP_N
SAE2
Herpes_IE2_3
Motif
Other DBs
NCBI-GeneID:
133492950
NCBI-ProteinID:
XP_061661802
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All DBs
Position
19:complement(7328211..7335703)
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AA seq
618 aa
AA seq
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MSSPANTPKPTDPFDMLWMQLQECHQKRLQELEEKVCKLKNERRLDAESLQLFYTRNQEM
KEQIKTLQDANSLLEDRLQTKECDRCAILEENLKKCQDHSERTLTNLRYERNCLEDENRK
LLSELQIIKSSKSQVAHHPGHEDGVIPDSPVLVNSFTVTNKLKKRKYLDNSKHVHDARNS
SIKCNRSLFKVQESSDTAKNPKRAQVLVPNTCVMDASQIPGEEEIGGEVIADTCGLELVN
TSHMKNTAAGQRYSSKSSLSDICLKPHRISSPSTAIYSPDSTTAKSSFHRPHCEKLNDVD
SLVKVKWTKEDDVPKELEEGKTCDSRNGKKLDTKVVLNQTRGVDCGSPAFKKPDVAPKGQ
AHYKQKKPKFHNVPSKPAHPDDGRNQRVENMWSIDPGLALSMYDIEEDAHEEQPFEELLD
TDCTMISHSLLQGRVEEDQHEHVFSDQGIGDKANDSLDRMFDATAHEEYISYNCTQVGNR
PCMEEEEEEEEEEDDEQEAPENSPRVRKMQHPTFAHVAVVRKKDERRKLKGTTCKECEVY
YTHLPEEEKQRKLSECSRHRHRFIPPSTPENFWEVGFPSTQTCIERGYIKEEKIPQSRLR
RKQPLTALFSPKSCQQKS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccctgcaaacacacccaaaccaactgacccctttgacatgttatggatgcaa
ctacaggaatgccatcaaaaaagacttcaagaacttgaggaaaaagtgtgcaagttgaaa
aacgaacgtcgcctggatgcagaaagtcttcaactgttttatacacgtaaccaggagatg
aaagaacaaatcaaaactctacaagatgccaatagtctattggaggacaggctgcaaact
aaagaatgcgatcgatgtgcaatcttggaggagaacttgaaaaaatgccaagatcatagc
gagcggaccctaaccaatctgaggtatgaaaggaactgcctggaggatgaaaaccgcaaa
cttctcagtgagctgcaaataataaagagctccaaatcgcaggtggcccaccacccaggg
catgaagatggtgtcatcccagactccccagtcctggtcaactcatttaccgtaactaac
aaactgaagaaacgtaaatacctggacaacagcaaacatgttcacgatgcacggaattcc
tcaatcaagtgtaacagatcacttttcaaagttcaagaatcaagcgacactgcaaaaaac
cctaaaagagcacaagtacttgttcctaacacgtgtgtaatggacgcgtcccagattcct
ggagaggaggagattggaggagaagtgatagcagacacatgtggccttgaacttgtcaac
acatctcacatgaaaaacacagctgcaggtcagcgttatagctcgaaatcgtccttgtct
gatatttgtctaaagcctcaccgtatttcttcaccgtccacggccatctacagtccagac
tcgaccacagcaaagtcatcatttcatcgtcctcactgtgaaaagttgaatgatgttgac
tcacttgtcaaagtaaaatggacgaaggaagacgatgttccaaaagagctggaagagggc
aaaacatgcgactcccgaaatgggaagaaattggacaccaaagtggttctcaaccaaacg
cgaggtgttgactgtggaagtccagctttcaagaagccagacgtagcacccaaaggacaa
gcgcactacaaacaaaagaagcccaagttccacaatgttccaagcaaaccagctcatcca
gatgatggaaggaatcaaagagtggaaaacatgtggagcattgaccctgggctggcgctc
tccatgtatgacattgaggaagatgcacatgaggaacaaccctttgaagaattacttgac
actgactgcactatgatcagtcacagcttactccaaggtcgcgttgaagaagatcagcac
gaacacgtattttccgaccaaggaattggtgacaaggcgaacgacagtctggatcgaatg
tttgatgcgactgcccatgaggagtacatatcttacaactgtacacaagttggcaatcgt
ccctgtatggaggaggaggaagaggaggaggaggaagaagatgatgaacaagaggctcca
gaaaactctccacgagtgcgcaaaatgcaacatccaacgtttgcacatgtggcagtggtc
cgcaagaaagatgaaagaagaaaactgaaaggcaccacttgcaaagaatgcgaagtttat
tacacccatctcccagaggaagagaaacagaggaagctgtctgaatgctctcggcaccgc
catcgcttcattcctcctagcacgccggagaacttctgggaagttggattcccgtcaact
cagacatgcatcgaaagaggttatattaaggaggagaagatcccgcagtctcgtttaagg
agaaaacagcctttgactgctctcttttctccaaagagttgccagcagaagagctaa
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