Syngnathoides biaculeatus (alligator pipefish): 133493030
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Entry
133493030 CDS
T09681
Symbol
bmi1a
Name
(RefSeq) LOW QUALITY PROTEIN: polycomb complex protein BMI-1-A
KO
K11459
polycomb group RING finger protein 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133493030 (bmi1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133493030 (bmi1a)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
133493030 (bmi1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
COMM_HN
COMM_domain
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
RING_ZNF598
Prok-RING_4
zf-RING_UBOX
zf-Nse
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
133493030
NCBI-ProteinID:
XP_061661935
LinkDB
All DBs
Position
19:3662968..3677210
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AA seq
609 aa
AA seq
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MSADPSRVPVAPPSCKMELSASVQLGLRSLGEASAVDHVAFPALVDVCFRSLLSSGRDAG
LLEKPELTQVEPVLLKGIHAATTTFILEAVRQNADESTISACLEELSFSSERIKIFYSCY
QVTSTTQTFSHHGLEKLPFXIVFFYSQEHKKELEHLLASIGRQPAHITDVSWRLQYHVKN
GQVDKVNEPFYLLSLNTENVGGREDINFTCTMEQLQDMVGKLKDAAKSAEKASQIALASA
TDSVCSLLQDGGWAAIHSLLIRLPTFIVCPPPAAASRARHAAPLLLIMHRTTRIKITELN
PHLMCVLCGGYFIDATTIIECLHSFCKMCIVRYLETSKYCPICDVQVHKTKPLLNIRSDK
TLQDIVYKLVPGLFKNEMKRRRDFYAEHPVEGSNGSNEDRGEVADEDKRIITDDEIISLS
IEFSDQSARLTGGLEDKHSSKDQMANKRYLQCPAAMTIMHLRKFLRSKMDIPNAYQVEVM
YEDEPLKDYYTLMDIAYIYTWRRTGPLPLQYRVRPNCKKLKASHAQQGAPQRPGQESDSA
SDKAGSPTGAASTSKWSSLPSPGDQALRSSRGPPSSVNCSQAPQAPSTSSRPFAQPRKIS
LNGSATSSG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgatccgtcacgtgtcccagtggccccgccctcttgcaaaatggagttgtcg
gcttcagtgcagctcgggctccgctctctcggcgaagcgtccgctgtggaccacgtcgcc
ttcccggcactggtggacgtatgcttccgctctctgctctcctccggccgggacgcgggc
ttgctggaaaagcccgaactgacgcaggtcgagccggtcctgctgaaggggatccacgct
gcgaccaccacattcatcctggaagcggtcagacaaaacgcagatgagtccacaataagc
gcctgcctcgaggagctgtctttcagttcagaaagaataaaaatcttctatagctgctat
caggtgacgagcacaacgcaaacattttctcatcatggccttgaaaaacttccatttnnt
attgttttcttttattcacaggaacacaaaaaggagttggagcatttgttagcaagcatt
ggaaggcaaccggctcacattacggacgtgtcatggcgcctgcaatatcacgtgaagaac
ggacaggtcgataaggtcaatgagcctttctacttattgtccctcaacacggagaatgta
ggtggtcgcgaggatatcaactttacctgcacaatggaacagttacaggacatggttggt
aaactgaaggacgcagctaagagcgctgagaaagccagtcagattgcgctcgcctcggcc
actgacagcgtctgcagcctgcttcaagatggcggctgggctgcgattcattcgctgctg
attcgcctcccaactttcattgtctgtccgcccccagccgcagccagccgagcccggcac
gcagccccccttttgctcatcatgcatcggacgaccaggatcaagatcactgagctaaac
cctcacctcatgtgcgtcctgtgcgggggttacttcatagatgccaccaccatcatcgaa
tgtctgcactcattttgcaaaatgtgcattgtccgttaccttgaaaccagcaaatattgt
cccatctgcgacgtgcaagtccacaaaaccaaacctctgctcaacattaggtcagacaaa
actctccaagacatcgtttataaactggtcccaggcctgtttaaaaatgaaatgaagagg
agaagagacttttatgctgaacaccctgttgaaggttcaaacggctccaacgaagaccga
ggtgaagtcgcagatgaggacaagagaatcatcacggacgacgaaatcatcagcctctcc
attgagttctctgaccagagtgccagactgacaggcggacttgaagacaagcattcaagc
aaagatcagatggcaaataaaaggtatttgcagtgtccggcagcaatgaccatcatgcat
ctgcggaagttcctgcgcagcaaaatggacatccccaatgcttaccaggtagaggtcatg
tatgaagatgaacccctgaaggattactacacgttaatggacatagcgtacatctacact
tggagaaggacgggcccactccctctccagtacagggtccgccccaactgtaagaagctg
aaggcgagccatgcccagcaaggggccccccagcggcccggacaggagagcgactcggcc
agcgacaaagccgggagccccacgggggccgcgtccacgtccaagtggtcgtccttgcca
agccctggcgaccaggcgctgaggtcctctcggggcccccccagcagcgtcaactgcagc
caggccccgcaggccccgtcgacatccagccgccctttcgcgcagccccgcaagatctca
ctgaacggctcagcgacgtcgtcaggataa
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