Syngnathoides biaculeatus (alligator pipefish): 133493034
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Entry
133493034 CDS
T09681
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3-like
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133493034
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
133493034
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF4778
MAP7
DUF6033
CDC45
DUF3408
DDHD
RR_TM4-6
Eapp_C
Zip
TERB2
Motif
Other DBs
NCBI-GeneID:
133493034
NCBI-ProteinID:
XP_061661939
LinkDB
All DBs
Position
19:7293423..7300238
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AA seq
741 aa
AA seq
DB search
MFAKFKGFLGGPQPPASPATTGAAPDPGRDPTPSPAPPVAPAVNKDNNPTEKDYAEKPQD
PAPSTAPSPAPAPTPAPTSTPAPVSAPTAAGEGAPPLPIIINPYSDEQLRSIVKRMRERL
DVCKEKVTDQYASSPEISPPVTPLLQKEHYAKVVEERRRQAEEERVKKEEVDKKKKEEQE
KKKKENEQKKKEEEEKKKLEAKEAKTQDFKTVFMEKLWTSVDVFLKPLEDSMDSVLGSTI
DPFTDRRYIAWLSVVTLAFNYNTWFITARLCFPYHTERSIPYWFALDLLADLIYLTDSII
FQSRKQFVKAGDIIKDGKLTKKNYRETERFVADIVSVLPFDLLYFQFGFKSIFRANRLLK
LDTFFEFSDRLESIMAKAYIWRVIRTIGYLLFMLHINACFYYVASDYQGIGQTKWVYSGL
GNAYLRCYYFAVRSLINIGGLNEPHTVFEITFQMTNFFTGVFVFSSLIGQMRDVIGAATA
GQTYFRSSMDGTVAYMVTNRIPSFVQNRVRTWYTYTWDAQGMLDESELLDKMPLVMRTAI
AVDINLTTFQKIDLFKGCDQQMLVDMLLRLKSIIYLPGDFVVKKGDIGKEMYIIKSGAVQ
VVGGPDNSIVFVTLKAGCVFGEISLLQSSKDGGNRRTANVKAYGFANLFVLEKKDLFDIL
VHYPESQKVLARKGRKLMKAKGPTAAKAEEEKKKGLALFGPKPPTPKLLRAFGGGFNKKM
IDKLKVSSLGSLLVARERRLY
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgaaatttaagggctttcttggtggcccacagccaccagcatctcccgccacc
actggagcagctcctgaccctggtcgagacccaacaccgagtcctgcacctcctgtagct
cctgctgtaaacaaggacaacaaccctactgaaaaggactatgcggaaaaaccacaggac
ccagcaccttcaacagcaccatcgccagcgccagcaccaacaccagcaccaacgtcaacc
ccagcgccagtatcagcccctactgctgctggagagggagctccccctctgccgatcata
atcaacccatattccgatgaacagcttcgctccatcgtgaagcgcatgcgagagaggcta
gatgtctgcaaagagaaagtgactgatcaatatgcttcgtcaccagagattagcccccct
gtcacaccactcttgcagaaggagcactatgctaaagttgtggaagagcggagaaggcaa
gccgaggaagagcgggtcaaaaaagaggaggttgacaagaaaaagaaggaagagcaggag
aagaaaaagaaggagaatgagcagaaaaagaaggaagaggaggagaaaaagaaattagag
gcaaaagaagcgaagacgcaagactttaagactgtctttatggagaaattgtggacttct
gtggatgtctttctaaagcccttggaggattccatggattctgtactggggagcacgatt
gatcctttcacagatcgtcgctacattgcctggttgagcgtggtgactctggccttcaac
tacaacacgtggttcatcactgcccgtctgtgcttcccctaccacaccgagcgctccatc
ccatactggttcgccttggacctgctggctgacctcatctacctcacggacagcatcatc
ttccagtctcgcaagcagtttgtcaaagcgggagacatcatcaaagatggaaagctgaca
aagaagaattacagagaaactgagagatttgtggccgacatagtttcagtcttgcccttc
gacttactctacttccagtttggattcaaatccattttcagagcaaaccgcttgctaaag
ttggatacatttttcgagtttagtgaccgcctggaaagcatcatggcaaaggcttacatc
tggagagttattcgcaccatcgggtatctcctcttcatgctccacatcaacgcctgcttc
tactacgtagcttcagactaccagggtattggtcaaaccaagtgggtctactctggactg
ggaaatgcgtacctgcgttgttactactttgctgtccgcagtctcatcaacatcgggggt
cttaatgaaccccacacagtctttgagatcacctttcagatgacaaactttttcacgggt
gtctttgtgttctccagtttgatcggacagatgagagacgtgattggtgcagccacagca
ggccagacttacttccgctcgtccatggacggcactgtggcctacatggtgaccaaccgc
atcccctccttcgtccagaaccgagtccgcacctggtacacgtacacctgggacgcccag
ggcatgctcgatgagtcggagctgttggataagatgcctttagtaatgagaactgccatt
gccgtcgacatcaacctgaccactttccaaaagatagaccttttcaagggctgtgaccag
cagatgttggtggatatgttactgagacttaagtctatcatctatttgccaggagatttt
gttgtaaagaaaggggacattggcaaagagatgtacattatcaagagcggagcagtgcag
gtggtgggagggcctgacaacagtattgtgtttgtcacacttaaggctggctgcgtgttt
ggagagatcagtttgcttcagtcatccaaagatggaggaaacagacggacggcaaatgtc
aaagcctacggatttgctaatctttttgtcctcgagaagaaagacttgtttgatattctc
gtccactacccagaatctcagaaagtgctggcccgaaagggaaggaaactaatgaaagct
aagggtccgacagcagcgaaagcagaagaggaaaagaagaaaggcctggcactttttgga
cccaaaccaccgacacccaaattactgcgagcctttggtggaggctttaacaaaaaaatg
attgacaaacttaaggtaagctctcttgggagtcttctggtggcacgtgagagacgctta
tattga
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