Syngnathoides biaculeatus (alligator pipefish): 133493042
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Entry
133493042 CDS
T09681
Symbol
abcd3a
Name
(RefSeq) ATP-binding cassette sub-family D member 3a isoform X1
KO
K05677
ATP-binding cassette, subfamily D (ALD), member 3 [EC:
7.6.2.4
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia02010
ABC transporters
sbia04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133493042 (abcd3a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
133493042 (abcd3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133493042 (abcd3a)
Enzymes [BR:
sbia01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
133493042 (abcd3a)
Transporters [BR:
sbia02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD3 subgroup
133493042 (abcd3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_23
SMC_N
BrxL_ATPase
AAA_27
Rad17
AAA_21
AAA_29
AAA_16
nSTAND1
Motif
Other DBs
NCBI-GeneID:
133493042
NCBI-ProteinID:
XP_061661946
LinkDB
All DBs
Position
19:491353..670771
Genome browser
AA seq
658 aa
AA seq
DB search
MAAFSKYVTAKNSSVAGGLLLMLYLLKNRTRRLKQDCSKQGSDLVLDVEKDGKKDRAAVD
KMFFLRILRILGIMVPQIFCMEAGYLVLIAVMLVARTYCDVWMIQNGTMIESAIIGRSTE
DFRTFLFSFIRFMPLIALVNNFLKLGLNELKLRFRERLTKNLYDQYLQGFTYYKMGNLDN
RIANADQLLTQDVEKFCNSVVDLYSNLSKPLLDIGLYIFKLTSAIGAQGPAIMMSYLLIS
GLMLTRLRRPIGKMTVTEQRYEGEYRYVNSRLITNSEEIAFYNGNMREKKTIHSTFKKLV
DHLHNFIFFRFTMGFVDSIIAKYIATVVGYLVVSRPFLNLSHPRHHRSTQSELLEDYYQS
GRMLLRMSQALGRIVLAGREMTRLSGFTTRITELIKVLKDLNSGKYQRTMVSQQKDVDTA
ENLALMPGKGQIINRDNIIKFHRIPLATPNGDILIRDLTFEVSSGTNVLVCGPNGCGKSS
LFRVLGELWPLFGGELTKPERGKLFYVPQRPYMTLGSLRDQVIYPDTFEEQRRKGISDQV
LKEYLDNVQLGHILNREGSWNSVQDWMDVFSGGEKQRMAMARLFYHKPQFAILDECTSAV
SVDVEDYIYSHCRMVGITLFTVSHRKSLWKHHEYYLHMDGRGNYEFKPITEETVEYGS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcagctttcagcaaatatgtgacagcgaagaactcctcagtagcaggtggacttttg
ctgatgttatacttactgaaaaacagaacacgaaggctaaagcaggactgttcaaagcaa
ggatcagatttggtgctggacgtggagaaggatggaaaaaaagaccgtgcagcagttgac
aaaatgttctttcttcgaattctacggatattggggatcatggtacctcagatcttttgc
atggaggctggatacctggtccttattgctgttatgttagttgcaaggacctactgtgat
gtatggatgattcagaatggaacgatgattgagagtgcaataattggccgctcaacagaa
gatttcaggaccttcttgttcagctttatccgatttatgccacttatagccttggttaac
aactttctcaagttgggcctgaatgagctgaaattgagatttcgagagaggctcacaaag
aacctatatgatcagtacctacagggcttcacttactacaaaatgggcaatttggacaac
cggattgcgaatgcagaccagttgctgactcaggatgtggaaaaattctgcaacagtgtg
gtggacctctattccaacctcagcaagcctttgttggatattggtttgtacatcttcaag
ctgacaagtgccattggggctcagggcccagccatcatgatgtcatacctgctcatctca
ggtttaatgctgactagattgaggagacccattggtaaaatgacagtcacagagcagcgc
tatgagggagagtaccgctacgtaaactctcggcttatcaccaacagtgaggagattgca
ttctacaatgggaacatgagagaaaaaaagaccattcactctacgtttaaaaaattggtt
gaccatttacataacttcatcttctttcgttttacaatgggatttgtggacagcataatt
gccaaatacattgccactgttgtgggatacctggtggttagcaggccgttcttaaacctg
tcccacccgcgacatcaccgcagcacacagtctgaactgctggaggattattatcaaagt
gggaggatgctgctgcggatgtcccaggctcttggcagaattgttctggctggtcgagaa
atgacccggctctcaggattcacaactcgtatcactgaactgatcaaagtcctgaaggat
ttaaattctggcaaatatcaacgcaccatggtctcccagcagaaggacgttgacacagca
gaaaatcttgcactcatgcctggaaaaggtcaaattatcaacagagataacatcatcaaa
tttcaccgtatccctttagcaacaccaaatggagacattctaatcagagacctcacattt
gaggtgagttctggcaccaatgttcttgtgtgtggaccaaatggctgtggcaagagctcg
ctctttagagttcttggagagctttggcctctgtttgggggagaattgactaagcctgag
agagggaaactcttctatgttccacagagaccctatatgacacttggttctctaagggac
caagtaatttaccctgacacctttgaagaacaaagaaggaagggaatctctgatcaggtt
ttgaaggaatacctggataacgttcagctgggccatatcttaaacagggagggcagttgg
aactcagtgcaagactggatggatgttttcagtggaggagaaaagcaaaggatggctatg
gcccgactgttctaccacaagccccaatttgctattctggatgaatgcaccagtgccgtg
agtgtggatgtggaagactatatctacagccactgcaggatggtaggcattactttgttc
acagtgtctcacagaaagtctctatggaagcatcatgagtactacctacacatggacggc
agaggaaactatgaattcaaacccatcacagaagaaactgtggagtatggctcttga
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