Syngnathoides biaculeatus (alligator pipefish): 133493082
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Entry
133493082 CDS
T09681
Symbol
trpa1b
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1b isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133493082 (trpa1b)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133493082 (trpa1b)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133493082
NCBI-ProteinID:
XP_061662031
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All DBs
Position
19:complement(14243784..14260458)
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AA seq
1133 aa
AA seq
DB search
MNFGREVARQTSCYTYVVEDEDPALAHLSIFELADQGDQALLENLVRKSPEVLSEKDELG
AGPVHHAAAGGHVALIQFITSVLGHQALNSCDERGDVPLHWAVDKDQAESCRVLLDLRAD
PNVLNAALLSPLHLAISQGHNRLVELLLSYGTVDYNLPGDLGNTPVMMACSLNNCEALDI
LLKHGARLCKQNKLGHFAVHAAAFAGAKKALEIILKAGEELGHFGENHINYLDKSNSSPL
HLAVRGGNTDTIRFCIVKGAKIDQKQHDRSTPLHLACTQGALEVVKMMLCSHGRVEDIIN
LKDGACQTPLHRATIFDHVDLADYLISLGADVNAVDCKGTPPLLLATSCGAWRTVVLLLS
NGANVNLKDRLGCNFLHLAILQPKGLKNLPQDVLQRSSVKALLSCEDNEGCTPLHYACRL
GIHDSVRNMLGLSGQLGLACKSKDKKSALHFAAQYGRINTCHRLLETITDSRLLNEGDER
GLTPLHLASRGGHTEVVRLLLRRGALFHRVLRYPVFVWSDYKGWTCLHHAASEGYTQTLD
ILLSANLKLLDKTDEDGNTALHIAARMGHVAAAMLMVNRGAEFVLNKSDTSFLHEALQNG
KHDVVNAVIDSERCAEALTTFKVGGSQRCPIMDMIEYLPETYKHLLDCSVRESEDDHNCP
AYHIEYNFCWLQAPLEMQKKGDKSTRIQPLAALNAMVKYNRIGLLNHPVCKKYLSMKWVA
YGSKAHILNMFMYLLGLLPLTHLIVALRPTMNITETGEHRITMVPVLFLEQSLFLSFCMV
MVLVMNVYCIVKEVLQIIQQRWNYLKDYSNQADWVSAINSLLFIIPAMLNASGSWYWEAG
ALAVLNSWIAFLLYLQRFEGIGIYVVMFGEICRTFYRTVLLFFFLLLAFALAFHALLLEQ
REFENLPLSMMQSFVMMVGELNYQNNFLDAYLKNELPFSTLTLFTFVSFVLVMPIVLVNL
LIGLAVGDIAEVQRNAAMKRIAMQIDLHTALEDKLPYWFIKRADKPSVVIYPNRKCSKHI
IMQLFGGSTATNDEWKRIFVTSQSCSTVEAELKKQKCRLKEMASVLEKQHNLLKLIIQKM
DITSEADEYDGPLNVGGTTWKRLCLPKRTTSSTGVSRWVPLMKAIESKPKGQV
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcggcagggaggtggcccggcaaaccagttgttatacttacgtggtagaagat
gaggatccagccctggcgcatctaagtatatttgagttggccgaccagggtgaccaggct
ctgctggagaacttggtgaggaagagccctgaggtcctaagtgagaaagatgaattggga
gctggccctgttcatcacgccgctgcggggggccacgtcgctctcatccagttcatcacc
agcgtgctgggccaccaggctctgaacagctgcgacgagcgcggagacgtgcccctccac
tgggctgtggataaggaccaggcggagagctgcagggttctgctggacctgcgggccgac
cccaatgtcctcaatgcggcactgctgtcacctttgcacctggccatcagccagggacac
aacaggctagtggagctgctgctctcctacggcacggtggactacaacctacccggagac
ctcggcaacaccccggtcatgatggcctgctcgctcaataactgcgaagctctcgacatt
ttgctaaagcacggagcacgtttgtgcaaacaaaataagctgggccatttcgcagtgcac
gcggctgcattcgcgggcgcaaaaaaggccctggaaatcatcctgaaggccggggaggag
ctaggccactttggtgaaaaccacattaactatctggacaaatccaatagctcgccgctg
catctggctgtgcggggcggcaacacagacaccattcgattctgcatcgtcaagggagcc
aaaattgaccagaaacagcatgacaggtcgacgccgctgcacttggcgtgtacccagggt
gccctcgaggtggtcaaaatgatgctgtgctctcacggccgagtggaggacatcattaac
ctcaaggatggagcatgtcagacgccgctgcacagggcgacaatatttgaccacgtggac
ttagccgactacctcatatctttgggtgcggacgtcaacgccgtggactgtaagggaacc
ccccccttgctgttggcaaccagttgtggggcatggagaaccgtggtgctgctcctgtcc
aacggggcaaatgtcaacctaaaggacaggcttggctgcaattttcttcatctggccatc
ttgcaacccaaggggctgaagaatctgccgcaagatgttctgcagcgtagcagtgtgaag
gcgttgctgagctgcgaggacaacgagggctgcacgccactgcactacgcgtgccgactg
ggcatccacgactcggtgcgcaacatgctgggcctctcgggccagctgggcctggcgtgc
aagtccaaggataagaagtctgccctacactttgctgctcagtatggccgtatcaatacg
tgtcaccgactgctggagaccatcacggactcacgcttgctcaacgaaggtgacgagcga
ggcctgacgccgcttcacttggcttccagaggggggcacacggaggtggtgaggctactg
ctgcgtagaggggctcttttccacagagtcttgagatatcctgtgtttgtctggagtgat
tacaagggctggacctgtctacatcatgcagcctctgagggatacacacaaactttggac
attctgttatcagccaacttgaaactgctggataaaacagatgaagatgggaacaccgcc
cttcacatagcggcaaggatgggccatgtggcggcagccatgctcatggtgaaccgaggg
gcggagtttgttttgaacaagagcgacacgtctttcctacacgaagcgctgcagaatggg
aagcacgatgtggtcaacgctgtcattgacagcgagaggtgtgcagaggcattgaccaca
tttaaagtcggtggatcccaacgatgccccatcatggacatgattgaatacctgcccgag
acctataagcacctgttggactgcagtgtaagggagtcggaggacgatcacaactgccct
gcctaccacattgaatacaacttctgctggctgcaagctcccctcgaaatgcagaagaaa
ggggataagtctacccggattcagccgctagccgcactcaacgcgatggtgaaatacaac
cgcattgggcttctcaaccatcccgtctgcaaaaagtacctgtccatgaagtgggtggcg
tacgggagcaaggcgcatattctcaacatgttcatgtacctgctgggtctgctaccgctg
actcacctcattgtggctctgagacccaccatgaacatcacggaaacgggcgagcacagg
atcaccatggtgcccgtgttgtttctggagcaaagtctgttcctgtccttctgtatggtg
atggtcctggtcatgaatgtctactgcattgtgaaagaagtgctacagataatacaacag
cgttggaactacttaaaagattactccaaccaagctgactgggtttcggccatcaactcg
cttctctttatcatcccggccatgctcaacgcgtcgggctcctggtactgggaagcggga
gcgcttgcagtcctcaactcctggatcgcattcctcttgtatctccaaaggttcgagggg
attggcatctacgtggtgatgtttggcgagatctgcaggacgttctaccggaccgtgctc
ctgttctttttcctcctgctggcctttgcattggcgttccacgcgctgctgctcgagcag
agagagttcgagaacttgccgctgtccatgatgcaatcatttgtgatgatggtgggcgaa
ctcaattaccagaacaacttcctggacgcgtatctgaaaaacgagcttcctttcagcacg
ttgacattattcacgttcgtctcctttgttctcgtcatgcccattgttctcgtaaacttg
ctgattggtttagcagtcggagacatcgctgaagtgcaaagaaatgctgccatgaaaaga
atagccatgcagatcgatctccacaccgccctggaagacaagctgccttactggttcatc
aaaagagcggacaaaccctccgtcgtcatctaccctaaccgcaagtgctccaagcacatc
atcatgcagctatttggaggcagcacggcaaccaacgacgagtggaagcgaatatttgtg
acgtcgcaaagctgctccacagtggaagctgagctcaaaaagcagaagtgcaggctgaag
gagatggccagcgtgctagagaagcagcacaacctcctcaagctcatcatccagaaaatg
gacattacctccgaggcggacgagtacgacggcccgctcaatgttggtggcaccacctgg
aagcgactgtgcctgcccaagcgcaccaccagcagcaccggcgtgtcccgctgggtgccg
ctcatgaaagccattgagtccaagcccaaaggacaagtttag
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