Syngnathoides biaculeatus (alligator pipefish): 133493148
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Entry
133493148 CDS
T09681
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133493148
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133493148
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
kleA_kleC
CdiA_C_tRNase
Motif
Other DBs
NCBI-GeneID:
133493148
NCBI-ProteinID:
XP_061662095
LinkDB
All DBs
Position
20:5722863..5736259
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AA seq
1820 aa
AA seq
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MRLLQGKLPRPGLSSHTNYQRGENAQKHQRREKTVKGSDMALLIHIWATFAALWSPAWTQ
APELADVCTEGSCYPATGDLLIGRAHKLTASSTCGLRRSDTFCIVGHLEEETKCFLCDSR
DPYDEDVNPLSHTVENVVTTFAPNRLKTWWQSENGVENVTVELDLEAEFHFTHLIMTFKT
FRPAAMVIERSMDFGKTWQVYRYFAYDCRAAFPGVSPGPMVKVDDIICDSHYSDIEPSTE
GEVIFRVLDPAFEIEDPYSLRIQNMLKITNLRVNFLKLHTLGDNLLDLRKEVTEKYYYAV
YDMVVRGNCFCYGHASECAPIDGAPTGAEGMVHGRCVCNHNTEGLNCERCKDFHHDHPWR
PAEGRNTNACKRCECNQHSGSCHFDMAVYMTTGNVSGGVCDDCRHNTVGRQCEQCAPFFY
QNPDRDLRDPSICEPCNCDPVGSLQGGLCDARSDVGAGLISGQCRCKAHVEGVRCDHCRH
GHYGLGQGPHGCLACACSPLGTLPGSNSCDSETGKCYCKRLVSGHDCDRCLPQHWGLSND
MDGCRPCDCDQGGALNNNCAPVSGQCECREHMFGRRCDQLESGFYFIALDHYTYEAEDAN
HGPGVSVVHRPYPLDRSPTWTGMGFAHVPEGGYLEFNIDNIPDSMDYDVLIRYEPQLPEE
WEQVDVQVHRPVFNPPNSSARCGGSFGDGDEQYVSLPPGSRHILLPTPVCFEKGQNYTVR
LSLTLYSSYSDIQSPYTLIDSLVLMPRIRELEMFHGTEGEAAWDTFQRYRCLESSQSVVK
SPMTDICNDYIFSVSALLHQGAMPCQCDLQGSVSAVCEPNGGQCDCRPKVVGRNCDHCAP
ATFLFSPAGCILCDCDPRGSIGALCHESTGQCTCVPGATGRQCGHCLPGFWGFPHCQPCQ
CNAHSEVCHPETGECQGCRDLTTGHNCERCLKGYHGDPELDSGSHCRPCSCPDGPRSARQ
FADSCYVEDKTNQLVCVCSPGYRGARCDECAPGHFGNPLVPGGRCLACQCNGNINMQDPG
SCDARTGSCLRCLYHTDGYACQNCKTGYYGNAATQSCRKCMCQPAGTAPHACSAPDECQC
DQHSGQCPCLPNVEGQNCERCAEDTWNLASGTGCQRCDCDPVHSFGSSCDEVTGRCSCKP
GFGGRTCRECRELFWGDPEVKCHACDCDPRGISSEQCDRATGHCTCVQSVSGPRCDKCAR
GYQGEFPDCQPCHQCFTTWDGVVEELTNQTRRLEGKVTELQTSGVTAPYKDLVTSLETNV
KAVKDIVEKNPAAVKLEGVQDLMHQITGVMSYLDGKMNTTEETLDVLQSDINATDANLEE
LMEQANQLERRVKELRQKVYDAKNANFQGAMDTITEANEVSTVAELRVNASSSDAGSTVE
QSATLRKVTEEKLNGSQKDFDRRNQRNTQKMDKLKNELEKLDLSPLSQKMCGGAAEGDEC
LSSPCGGLGCVDGDGSRRCGGEGCEGLVVTSQTALKSAKELDEEILAAIKEVDQLSRMVW
EASNRAREAKVNAQQVLMKSNQSKERVEQSNEQLRNLIKDIRDLLTNDKANASVIEAVAN
EVLALEMPTSTEKLQELTQEIKEKVGALTNVESILSQSADDMKAAEELLSQAKAANKEAS
DMVVKSDLVKKALDETERAQSLASDAVRLARNKTEGTLELLHSVDSETASSEHRLGNTTG
RLLQLEREVGLIRQNRLEINSLAETADRTGQRAKKDADEAQQEFDAEVKDKLEEVEDLVE
DKGESVLQARKRADELQQEAKELLVQSSAKLQRLQELERSYEDNQRTLEAKAAEMAELEE
AARRILDDISHKVMLYSTCL
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcctccaaggaaaactcccacgccccggactttcttcacacacaaactaccag
agaggggaaaacgcgcagaagcatcaacgccgtgaaaagaccgtcaagggctccgacatg
gcgctcctcatccacatttgggcgacttttgcggcgctctggagtcccgcctggacgcag
gcgcccgagctggccgacgtgtgcacggagggcagctgctacccggccacgggcgacctg
ctgatcggacgcgcccacaagctgacggcctcgtccacgtgcggcctgcgtcgaagcgac
accttctgcattgtgggccacctggaggaagagaccaagtgcttcctgtgcgactccagg
gacccgtacgacgaggacgtcaacccgctgagccacaccgtcgagaacgtggtgaccacc
ttcgcccccaaccgcctcaagacgtggtggcagtcggaaaacggtgtggagaacgtgacc
gtcgagctggacctggaggccgagttccacttcacacacctcatcatgaccttcaagacg
ttccggccggccgccatggtgatcgagcggtcgatggacttcgggaagacgtggcaagtg
taccgctactttgcctacgattgccgggcggcgttccccggcgtgtccccgggccccatg
gtgaaggtggacgacatcatctgcgactcgcactactctgacatcgaaccgtccaccgag
ggcgaggtgatattccgagtgctggaccccgcctttgagatcgaggacccgtacagcctg
aggatccagaacatgctgaagatcaccaacctgcgcgtcaacttcttgaagctgcacacg
ctgggcgacaacctgctggacttgcgcaaggaggtgacagagaagtactactacgctgtc
tacgacatggttgttcgcggcaactgcttctgctacggccacgcctccgaatgcgcgccc
atagacggagcacccacgggggccgagggaatggtccacgggcgctgcgtgtgcaaccac
aacaccgaaggcttgaactgcgagcgatgcaaggacttccatcacgaccacccctggagg
ccagccgagggccgcaacaccaacgcttgcaagaggtgcgagtgtaaccagcactctggt
tcttgccacttcgacatggccgtctacatgaccacaggtaacgtcagcggcggcgtctgc
gacgactgtcgtcacaacacggtgggccgccagtgcgagcagtgcgcacccttcttctat
caaaaccccgaccgagatctgcgggaccccagcatctgcgagccttgtaattgcgacccg
gtcggctccctgcaggggggactgtgtgatgccaggtctgacgtgggcgccggactcatc
tcgggccagtgtcgctgcaaagcccacgtggagggggtccgctgcgaccactgcagacac
ggacactatggattgggacagggtccgcacggatgcctggcttgcgcctgcagcccactg
ggaacgctgccgggaagcaattcctgcgactctgagacaggaaagtgctactgcaagcgg
ctggtcagcggacacgactgcgaccggtgtctgccgcaacactggggtctctccaatgac
atggacggatgtagaccttgtgactgtgaccagggaggggccctcaacaataactgtgct
cccgtctcgggacagtgcgagtgcagggagcatatgttcggccggcgctgtgaccaactc
gagtccggcttctacttcatcgctcttgaccattacacctatgaggctgaggatgccaac
cacggacctggcgtgtcagtggtccacagaccttaccctctggatcgcagccccacgtgg
actgggatgggttttgctcatgtaccagagggaggctatttggagttcaacatagacaac
atccccgattcgatggactacgacgttcttatccgctatgagccgcagcttcctgaggag
tgggagcaggttgacgtccaagtccatcgtcccgtcttcaaccctcccaactcctccgcc
cgctgcggaggttcctttggtgatggagacgagcagtatgtctccctgccgcccggttca
aggcacattttgctgcccacacccgtctgttttgagaagggacagaactacacagtccgg
ctcagcctgacgctctactcatcctacagcgacatacagagcccgtacacgctcattgac
tctttggtgctgatgccccggatccgggagctggaaatgttccacggcacagaaggagaa
gcggcgtgggatacgttccagcgttaccgctgcctggagagcagccagagcgtggtcaag
agtccgatgacagacatctgcaacgactatatcttcagcgtctctgcgctgctgcaccaa
ggagccatgccttgccagtgcgacctgcagggttcggtcagcgctgtgtgtgagcccaac
ggaggccagtgtgactgtcgccccaaagtggtggggaggaactgtgaccactgcgccccc
gccacctttctcttcagccccgcgggatgcatactctgcgactgtgacccccgagggtcg
attggggcactttgtcacgaatcgacggggcagtgcacgtgtgtccccggggccacaggg
cgccagtgtggccactgtctgccaggattttggggattccctcactgccaaccttgtcaa
tgtaacgcccacagtgaagtctgccacccagagacgggggagtgtcaaggctgcagagac
ttaaccactggacacaactgtgagagatgtctgaagggttatcacggtgacccggagtta
gactccggcagccactgccgaccctgttcgtgccccgacggcccgcgcagcgcacgtcag
tttgccgacagctgctacgtggaggacaagacaaaccagctggtgtgtgtgtgcagtcct
ggctacagaggtgccaggtgcgacgagtgcgccccaggtcacttcggcaacccgctggtg
cctggcgggcgctgcttggcgtgccagtgcaacggcaacattaacatgcaagaccccggg
tcctgtgatgctcggacggggtcctgtctcaggtgcctgtaccacacggacggctatgcc
tgccagaactgcaaaactggctactatgggaacgctgccactcaaagctgcagaaagtgc
atgtgccagcctgcgggaacagcaccacatgcgtgttcagcgccagacgagtgccagtgc
gaccagcacagcggccaatgcccttgcctccccaacgtggaaggccagaactgtgagcgc
tgtgccgaggacacatggaacttggcaagtgggacaggctgccagcgctgcgactgtgac
ccagtccactcctttggctcctcctgtgatgaggtgacgggacggtgctcgtgtaaaccg
ggatttggtggcaggacttgccgggaatgcagggagctcttctggggggatccagaagtc
aagtgtcatgcctgtgactgtgaccctcgcgggatttccagcgagcagtgtgatcgggcc
accggacactgcacctgcgtgcagagcgtatccggtcctcgatgcgacaagtgcgctagg
ggctaccagggggaatttcccgactgccagccttgtcaccagtgcttcacgacgtgggac
ggggtggttgaggagctgaccaatcaaacgcggcgtctagagggaaaggtgacagagctg
cagaccagcggtgtgacagcaccatacaaagacttagtgaccagcctggagaccaatgtg
aaggcggtcaaggatatcgtggagaagaaccctgcagcagtcaagctggagggtgtccag
gacttgatgcatcaaatcactggcgtcatgtcctacctggacgggaagatgaacacaaca
gaggagaccttggacgtcctccagagtgacatcaacgcaacagacgccaacttggaggag
ctgatggagcaggcgaaccagttggagcgccgggttaaggagctcaggcagaaggtgtat
gacgccaagaacgccaacttccagggtgccatggacaccatcactgaagcaaacgaggtg
tcgactgtggcagaactccgagtcaatgcctccagcagtgatgctgggagcactgtggag
cagtcagcgacgctccgcaaggtcaccgaggagaaactgaatggcagccagaaggatttt
gatcgcaggaaccagcgaaacacacagaagatggacaagctgaagaatgagctggaaaaa
ctggatctgtcccctcttagtcagaagatgtgcggtggcgcggctgaaggcgacgagtgc
ctcagctctccttgcggcgggttgggctgtgtggacggggacggcagccgccggtgtggg
ggcgaaggatgcgaaggcctcgttgtcacctcccaaactgctctgaagtcagccaaggag
ctggacgaggaaatcctggcagccataaaggaggtggaccagctctccaggatggtgtgg
gaggccagcaatcgagcaagggaggccaaagttaatgctcagcaggtcctgatgaaatcc
aaccaaagcaaggagcgagtggagcagagcaacgagcaactgcgcaacctcatcaaggat
ataagagacctgctcacaaacgacaaggccaacgcgtccgtcatcgaggcggtggccaat
gaggtcttagccctggagatgcccacatcgactgagaagctgcaggagctgacccaggaa
atcaaggagaaggtcggcgctctgaccaacgtggagagcatcctcagccagagcgcagat
gacatgaaagctgcagaggagctgttgagccaggccaaggccgccaataaggaggcgtca
gacatggtggtgaagtcagacttggtgaagaaagctctggacgagactgagcgtgctcag
agcctcgccagcgatgccgttcgactggctcggaacaaaacagagggaactctggagctg
cttcattcggtggattcagagacggcgtcatcggagcaccgtcttggcaacaccacgggc
cggttgctgcaactggagcgtgaggtgggcctcatccggcagaacaggctggagataaac
agcctggcggagacggccgaccggaccggccaacgggccaagaaggatgcggacgaggcc
cagcaggagtttgacgcggaggtgaaagacaaactggaagaggtggaggacctcgtggaa
gacaagggcgagtcagtgttgcaggccaggaaacgagccgacgagctgcagcaggaagcc
aaggagctcctggttcagagcagcgctaagctacagagactacaagagctggagcgctcc
tacgaggacaaccagagaacgctcgaggccaaagccgcagagatggccgagctggaggag
gccgcccgccgcatcctggacgacatcagccacaaagtgatgctgtatagcacctgcctg
tga
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