Syngnathoides biaculeatus (alligator pipefish): 133493221
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Entry
133493221 CDS
T09681
Symbol
tnpo3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
sbia03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133493221 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133493221 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbia03016
]
133493221 (tnpo3)
Transfer RNA biogenesis [BR:
sbia03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
133493221 (tnpo3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
133493221
NCBI-ProteinID:
XP_061662286
LinkDB
All DBs
Position
20:complement(4941756..4950124)
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AA seq
923 aa
AA seq
DB search
MEGGKPSLPLVYQAVQALHHDPDPAGKERASMWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPDSHNALRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYNGDISSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTV
VTLLASCVEKTGNNEKMLIKVFRCLGSWFNLGVLDSNFMASNQLLMVLFQVLQRDDTSTN
LHEAAADCVCSALYAIENVDTNATLALQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFT
ELCETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGETLYKISDVG
LHSIFRPYIQRLLHCLARHCQLDPDHEGIPEETDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLKDGNPPWVVTEAVLFIMAAIAKSVYPENNATLLEVLQQVVLLPEVVHMAVRYT
SIELVGEMSEVVYRDPRFLDPVLNYLMKGLREKPLASAAAKAIHNICSVCRDHMAQHFQG
LLDIARSLDSFALSTEAAVGLLKGTALVLGRLPLEKIAECLGDLCAVQVAALKKLLAEES
TNGRSADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQANGLLNHPDTVDDLFRLATRFVQRSPVTLLSSSIIVHIIQCA
IAATSLDHRDANCSVMKFVRDLIHTGVANDHMDDFDLRKQLIGQAMEQHGQQLVTQLMHS
CCFCLPPYTLPDIAEVLWEVMVFDRPTFCRWLESALKGLPKETSGGTVTVTHKQLTDFHK
QVTSADDCKQVCWAIREFTRLFR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaggggggcaaaccgagtctgccgctcgtctaccaggcggttcaggccctgcaccac
gacccggatccagccgggaaggaacgagcttcgatgtggctcggagagctccagagatcg
atgtacgcgtgggagatctcggatcagctgctgcagctcaaacaggacgtggagtcgtgt
tattttgccgctcagaccatgaagatgaagatccagacttccttctacgagcttccaccc
gattcccacaacgcgctgcgagactcactgctgtctcatatccagaacctcaaagacctg
tcgcccatcatcgtcacccagctggcgctggccatcgccgacctcgctcttcagatggcg
tcgtggaaaggatgtgtgcatacgctcattgaaaagtacaacggtgacatcagctccatg
cccttcctcatcgagatcctgactgtgctgcccgaagaggtccacagccgctcgctacgt
atcggagccaatcgcaggacagagattatcgaggacttggcttattactcgtccaccgtg
gtcacgctactggcgtcgtgtgtggaaaagacgggaaataatgagaagatgctcatcaag
gtttttcgttgtctggggagctggttcaacctgggggtcctagatagcaacttcatggcc
agtaatcagctgctcatggttctcttccaagtgctgcagagggacgacacgtcgaccaat
ctccacgaggcggccgcagactgcgtgtgctctgccctctacgccattgagaacgtggac
accaacgccacgttggcgctgcagctcttccagggcgtcctgacgctggagacggcctat
cacatggcggtggcccgcgaagacctcgacaaagttcttaactattgcagaatcttcact
gagctttgcgagacctttttggagacgacggtcaggagtcccggtcagggaatgggagac
ttgaggacgctggagctgcttctgatctgtgccggacatccccagtacgaggtggtggaa
atctcctttaacttctggtaccggctcggagagactctgtacaagatcagcgacgttggc
ctccacagcattttccgaccgtacattcagagactactgcactgtttggcccggcattgt
cagctcgacccggatcacgaaggaattcctgaggagacggacgattttggggagttcagg
atgagggtttctgacctagtgaaagatgtcatttttctcgtcgggtcgatggagtgcttt
tctcagctgtattctaccctcaaagatggcaaccccccttgggtggtgactgaagccgtt
ctcttcataatggctgccatcgccaaaagtgtttaccctgaaaacaacgcaaccctgttg
gaggtgttgcagcaggtggtgctgctgccggaagtggttcacatggcggtgcgttacacg
agtatcgagctggtcggagagatgagtgaggtcgtgtacagagaccccagattccttgac
ccggtcttgaactacctgatgaaaggtctgagagagaaacccctggcctcggccgccgcc
aaggcgatccacaacatttgctccgtgtgtcgggaccacatggcgcagcacttccagggc
ctactggacatcgctcgctccctggactcctttgcgctgtccacagaggccgccgtcgga
ctgctcaaaggcacggcgctggtcctgggtcgtcttcctctggaaaagatcgcagagtgc
ctcggtgacttgtgtgccgttcaggtcgcggcccttaaaaagcttctggccgaagaatcg
acgaacggtcgctcggccgatccgaccgtctggctggacagactggccgtcattttcaga
cacacaaaccccatcgtggagaacggccagacgcacccgtgtcagaaggtcatccaggag
atctggcccgtgctgtccgagacactcaacactcaccaggcggacaaccgcatcgtggaa
cggtgctgtcgctgcctccgcttcgccgtgcgctgtgtcggaaaaggctcggcctcctta
ctgcagcccctggttactcagatggtgagcgtgtaccaggtgtatccgcactcgtgcttc
ttgtacctgggcagcatcctggtggacgagtacggtatggaggagggctgtcggcagggc
ctgctcgacatgctgcaggctctgtgcatgccgacgttccagcttttggagcaagccaac
ggccttttgaaccaccccgacacggtcgacgacctcttcagactggcgacgaggttcgtg
caacggagtcccgtcacgctgctgagcagcagcattatcgtccacatcatccagtgcgcc
atcgccgccacctcgctggaccacagagacgccaactgcagcgtcatgaagtttgtccga
gacctgatccacaccggcgtggccaacgaccacatggacgactttgatttgaggaagcag
ctgatcggtcaggccatggagcagcacggccagcaactcgtcacgcagctcatgcactcg
tgttgcttctgtctgcccccgtacacgctgcccgacatcgccgaagtcttgtgggaggtc
atggttttcgaccggccgaccttctgccgctggttggagagcgctctgaaaggcttgccc
aaggagacgtcgggagggacggtgacggtgacgcacaaacagctgacggattttcacaaa
caagtcaccagcgctgatgattgtaagcaagtgtgttgggccatcagagagttcaccaga
ctgttccggtaa
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