Syngnathoides biaculeatus (alligator pipefish): 133493238
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Entry
133493238 CDS
T09681
Symbol
lrp6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04150
mTOR signaling pathway
sbia04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
133493238 (lrp6)
04150 mTOR signaling pathway
133493238 (lrp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133493238 (lrp6)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
133493238 (lrp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
SGL
DUF5050
EGF_LRP2
EGF
cEGF
Motif
Other DBs
NCBI-GeneID:
133493238
NCBI-ProteinID:
XP_061662325
LinkDB
All DBs
Position
20:complement(5065051..5083381)
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AA seq
1612 aa
AA seq
DB search
MAVVLRTLLLATFCLRLRGEPLLLYANRRDLRLVDAARERANASVVVGGLEDAAAVDYVF
SRGLIYWSDVSEEAIKRTVLDPSGAGGGAVHTVVPGLASPDGLACDWLAAKLYWTDSETN
RIEVSELDGTLRKVLFWQELDQPRAIALDPARGFMYWTDWGEIPKIERAGMDGTNRSIIV
ERDIYWPNGLTLDYEQRKLYWADAKHNFIHRCHLDGTNREVVVKGELPHPFALTLFEDTL
FWTDWNTHSIHSCAKHNGADQRVVHSDIFSPMDIHVFSAKRQTQLSTPCSLNNGGCSHLC
LLSPDEPSFRCACPTGVQLLQDAKTCRDGPTRMLLLARRTDLRRISLDTPDFTDIILQVD
DIRHAIAIDYDPVDGYIYWTDDDVKAIRRSLPDGADAQFVVTSQVNHPDGIAVDWIARNL
YWTDTGTDRIEVTRLNGTMRKILISEDLDEPRAIVLDPVAGYMYWTDWGEVPKIERADLD
GTERVVMVNTSLGWPNGLALDYDERKLYWGDAKTDMIEVMNMDGTERRVLVEDKLPHIFG
FTLLGDFIYWTDWQRRSIERVHKHTAEREIIIDQLPDLMGLKATDLHRAQGGNPCADSNG
GCSHLCLFTPRGAQCGCPIGLELIADMRTCIVPEAFLLFSRHTDIRRISLETNNNNVAIP
LTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK
NLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGYMYWTEWGGKPKIDRAA
MDGSGRVTLVADVGRANGLTIDYAERRLYWTDLDTTLIESANMLGQDREVIADDLPHPFG
LTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACASTN
GHCSHLCLAVPVSGFVCGCPAHFSLNYDNKTCNAPTSFLLFSQKTAINRMVMDEQQSPDI
ILPIHNLKNVRAIDYDPLDKQLYWIDSKQNVVRRAQEDGNQSMTVVSGSQMYDLSIDIYS
RFIYWTSELTNVINVTRTDGGRVGVVLRGPHYKPRAIVVNPERGYMYFTNLVERSPTIER
AALDGTEREVLFFSGLGKPVALAVDNELGKLFWVDSDLRRIEGSDLSGANRVVIADSNIL
QPVGLTVFGKHLYWIDKQQQMIERVDKTTREGRTKIQARIAYLSDIHAVHELDMREYGKH
PCTWDNGGCSHICVVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCRSGDVDCIP
RSWRCDGYPECDDISDEADCPVCSESEFECDSRQCVERSLRCNGEYNCQDHSDEHECTAH
CPFDQSPCANGQCVAKHKKCDNNVDCADGSDEIGCYPTEEPPAPNNTVGSIVGVVMALFL
VGAVYFVCQQVLCSQKKDDGETVTVVPGPPSVQLGYVPHPASLPSSLSVMSEGKSAIGSL
SITGGSSGPPYDRAHITGASSSSSSSTKGAYLPPILNPPPSPATVRSLYTLELGYSSNSP
STHRSYSYRPYTYRHFAPPTTPCSTDVCDSDYTPGRRAPLKTVGGARAPAGAKGYGSDLN
YDSEPFPPPPTPRSQYLSAEENCESCPPSPFTERSYSHHLYPPPPSPCTDSS
NT seq
4839 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgtgctgcggactctgttgttggccactttttgtctgcgcctccgaggtgag
ccgctgctgctgtacgccaaccggcgggacctgcgcctggtggacgccgcccgcgagcgg
gccaacgccagcgtggtggtggggggcctggaggacgcggcggccgtcgactacgtcttc
tcgcgggggctcatctactggagcgacgtgagcgaggaggccatcaagcgcaccgttttg
gacccgtcgggagcgggcggcggcgccgtccacacggtggtgcccggcctggcctctcct
gacggtctggcctgcgattggttggccgctaaactctactggaccgactcggagaccaat
cgcatcgaggtgtccgagctggacggaaccttgaggaaagttctcttctggcaggagctg
gaccaacccagagccatcgccttggatcccgcacgagggttcatgtactggacggactgg
ggcgagatccccaagatcgagcgggccggcatggacgggaccaaccgctccatcattgtg
gagcgcgacatctactggcccaacggactgacgctggactacgagcagcgcaagctctac
tgggccgacgcaaagcacaatttcatccacaggtgccatctggacggcaccaacagggag
gtcgtggtgaaaggggagctgccccaccccttcgccctcaccctcttcgaggacacgctc
ttctggaccgactggaacacgcactccatccactcgtgcgccaagcacaacggcgccgac
cagcgcgtggtccactcggacatcttctcgcccatggacatccacgtgttcagcgccaag
aggcaaacccagctgagcacgccgtgctcgctcaacaacggcggctgctcccacctgtgc
ctgctgtcgcccgacgagccctccttccgctgcgcctgccctaccggggtgcagctgctg
caggacgccaagacctgccgtgacggccccacgcgcatgttgctgttggcccgccggacg
gacctgcgccgcatctcgctggacacgcccgacttcaccgacatcatcctgcaggtggac
gacatccggcacgccatcgccatcgactacgacccggtggacggttacatctactggacg
gacgacgacgtgaaggccatccgccgctccctgcccgacggcgccgacgcccagttcgtg
gtcacgtcgcaggtcaaccacccggacggcatcgccgtggactggatcgcgcggaacctc
tactggaccgacacgggcacggatcgcatcgaggtcaccaggctcaacgggaccatgcgc
aagatcctcatatccgaggacctggacgagcccagggccatcgtcttggaccccgtggcc
gggtacatgtactggacggactggggcgaggtccccaagatcgaacgggccgacctggac
gggaccgagcgggtggtgatggtcaacacgtcgctgggttggcccaacggcctggcgctg
gactacgacgagcgcaagctctactggggcgacgccaagaccgacatgatcgaggtgatg
aacatggacgggaccgagaggcgggttctggtcgaggacaaactcccgcacattttcggt
ttcacgctgctgggcgacttcatctactggacggactggcagcgccgcagcatcgagcgc
gttcacaaacacacggccgagcgcgagatcatcatcgatcagctgcccgacctgatgggg
ctgaaggccaccgacctccaccgggcgcaaggcggcaacccgtgcgcggacagcaacggc
ggctgcagccacctgtgcctgttcacgccgcggggcgcgcagtgcggctgccccatcgga
ctggagctgatcgccgacatgcgcacgtgcatcgtgcccgaggccttcctgctcttctcg
cgtcacaccgacatccggcgcatctcgttggagaccaacaacaacaacgtggccatcccg
ctcaccggcgtcaaggaggcctccgccctcgactttgacgtcaccgacaacaggatttac
tggaccgacatcactctcaagaccatcagccgggccttcatgaacggcagcgccctggag
cacgtggtggagttcgggctggactaccccgagggcatggcggtggactggttgggcaag
aacctgtactgggccgacacgggcaccaaccgcatcgaggtggccaaactggacgggcag
caccggcaggtcctggtctggaaggacttggacagcccgcgggctcttgccctggacccg
gctgaaggctacatgtactggaccgagtggggcggcaagcccaagatcgaccgagcggcc
atggacggaagcggccgtgtcactctggtggcggacgtgggccgagccaacggactcacc
atcgactacgccgagcggcgcctgtactggaccgacctggacaccacgctcatcgagtcg
gccaacatgctgggtcaggaccgggaggtgatcgccgacgacctcccgcacccgttcggc
ctgacccaataccaagattacatctactggacggactggagccagcgcagcatcgagcgg
gccaacaagacgagcggccagaaccgcaccgtcatccagggccacctggactacgtcatg
gacatcctggtgttccactcgtcccggcagggcggctggaacgcttgcgcctccaccaac
gggcactgctcgcacctgtgcttggcggtgccggtcagcggcttcgtgtgcggctgtccc
gcccacttctcgctcaactacgacaacaagacctgcaacgccccgacgtccttcctgcta
ttcagccagaagacggccatcaaccgcatggtgatggacgagcagcagagtcccgacatc
atcctgcccatccacaacctgaagaacgtccgcgccatcgactacgacccgctggacaag
caactgtactggatcgactccaagcagaacgtggttcggcgcgctcaggaggatggcaac
cagagcatgacggtggtgtcgggctcccagatgtacgacctgagcatcgacatctacagc
cgcttcatttactggaccagcgagctcaccaacgtcatcaacgtcacgcgcaccgacggc
gggcgggtgggcgtcgtgctgaggggcccccactacaagccgcgcgccatcgtggtcaac
cccgagagagggtacatgtacttcaccaacctggtggagcgctcgcccaccatcgagcgc
gcggcgctggacgggacggagcgcgaggttctgttcttcagcgggctgggcaaacccgtg
gccctggcggtggacaacgagctgggcaagctcttctgggtggactcggacctgcggcgc
atcgagggcagcgacctgtcaggcgccaaccgcgtggtgatcgccgactccaacattctg
caaccggtgggcctgacggtgttcggcaagcacctgtactggatcgacaagcagcagcag
atgatcgagcgggtggacaagaccacgcgcgagggccgcaccaaaatccaggcccgcatc
gcctacctcagcgacatccacgccgtgcacgagctcgacatgagggagtacggtaaacac
ccgtgcacgtgggacaacggcggctgttctcacatctgcgtggtcaagggcgacggcacc
acccgctgctcctgccccgtccacttggttctgctgcaggatgagctgtcctgcggagag
cctcccacgtgttccccggagcagttctcttgccgctccggcgacgtggactgcatcccg
cggtcgtggcgctgcgacggctaccccgagtgcgacgacatcagcgacgaggcggactgc
cccgtctgctcggagagcgagttcgagtgcgacagtcgccagtgcgtcgagcgcagcctg
aggtgcaacggcgagtacaactgccaggaccactcggacgagcacgagtgcacagcgcac
tgccccttcgaccagtcgccgtgcgccaacggccagtgcgtcgccaagcacaagaagtgc
gacaacaacgtggattgcgccgacggctcggacgaaatcggctgctaccccacggaggag
ccgcccgcgcccaacaacaccgtcggctccatcgtgggcgtggtgatggcgctgttcctc
gtaggcgccgtgtactttgtgtgccagcaagtcctgtgctctcagaagaaagacgacggc
gagacggtgacggtggtgcccgggccgccctcggtgcagctgggttacgtgccgcacccc
gcctccttgcccagctcgctgtcagtcatgtccgaaggcaagtcggcgatcggctccttg
agcatcacgggcgggagcagcggcccgccgtacgaccgcgcccacatcaccggcgcctcg
tccagcagctcctccagcaccaagggcgcgtacctccctccgatcctgaacccgcctccc
tcccccgccaccgtccgctcgctgtacacgctggagttgggctactcctccaacagcccg
tccacgcaccgatcctacagctaccggccgtatacgtaccgccacttcgcccctcccacc
actccgtgcagcacggacgtatgcgacagcgactacacgccggggcgccgcgctccgctc
aagacggtcggcggcgcccgcgcgcccgctggggccaaaggttacggcagcgacctcaac
tacgactcggagcctttcccgccgccgcccacgccgcgcagccagtacctgtcggccgag
gagaactgcgagagctgcccgccgtcgcccttcaccgagcgcagctactcgcaccacctc
tacccgcccccgccctcgccctgcacggactcgtcctga
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