Syngnathoides biaculeatus (alligator pipefish): 133493245
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Entry
133493245 CDS
T09681
Symbol
nup50
Name
(RefSeq) nuclear pore complex protein Nup50
KO
K14295
nuclear pore complex protein Nup50
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133493245 (nup50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133493245 (nup50)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133493245 (nup50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
133493245
NCBI-ProteinID:
XP_061662344
LinkDB
All DBs
Position
20:5112548..5117144
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AA seq
374 aa
AA seq
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MAKRNADKELTDRNWDQEEEGEEAGTFSVATEDVMKKRAIKKAKRRNVGPEGEPGGAFRG
FKGFSASAPSAPTPFSAFGNGAGFKGLSSLTNGSGGAFLALSFADASSSASPAASAAGAA
FNGSAGKEYGRQLTALNCSVRDWISKHVDDNPLCDLQPIFRDYERHLASIERQYGAAASG
AQDRKARPSLPASPSSFSFKGENEESPAATFDPGQKTATPAFSLFGGASRPPAETDRAGP
SEANEDDAYEPPEPDVKEVKEDDAFYSKRCKLFYKKDGEFKEKGVGTLHLKETAGGKTQM
IVRADTNLGNILLNVLLPAGVPCSRVGKNNVMVVCVPNPPVDDKNPGTPVPLLIRVKTAD
DADQLHRTLEEKRG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcggaacgcggacaaagagctgacggaccgcaactgggaccaggaggaggag
ggagaagaggccggaaccttctcggtggccacggaagacgtgatgaaaaaacgcgccatc
aagaaggccaagcggcggaacgtcggcccggagggggagcccggcggggccttcagaggg
ttcaagggcttctcggcgagcgccccctccgcgccgacgcccttctccgccttcggcaac
ggcgccgggttcaagggcttgagctctctgaccaacgggagcggcggcgccttcctcgcg
ctctccttcgccgacgcgtcgtcctcggcgtctccggccgcgagcgcggcgggggcggcg
ttcaacggctcggccggcaaggagtacggacggcagctgacggcgctcaactgctccgtc
cgcgactggatcagcaaacacgtggacgacaacccgctgtgcgacctgcaacccatcttc
cgcgactacgagcgccacctggctagcatcgagcggcagtacggcgcggcggcatcgggc
gcgcaggaccgcaaagcccgcccctcgcttcctgcctctccgtcctcgttttctttcaag
ggcgagaacgaggagtcgcccgctgccacgttcgacccgggtcagaagacggccacgccc
gccttttccttgtttggaggcgcctcgcggccccccgccgagacggaccgcgccgggcct
tcagaggcgaacgaggacgacgcgtacgagccgcccgaacccgacgtgaaggaggtcaaa
gaagacgacgccttctactccaagaggtgcaaacttttctacaagaaggacggcgagttc
aaggagaaaggcgtgggcacgctgcacctcaaagagacggccggcggcaaaacgcagatg
atcgtcagggcggacaccaacctgggaaacatcctcctcaacgtgctgctgcccgccggc
gtgccgtgctcgcgggtgggcaagaacaacgtgatggtggtgtgcgtgcccaacccgccc
gtggacgacaagaacccgggcacccccgtgcccctcctcatccgcgtcaagaccgccgac
gacgccgaccagctgcaccggactctggaggagaagcgaggctga
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