Syngnathoides biaculeatus (alligator pipefish): 133493280
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Entry
133493280 CDS
T09681
Symbol
hcfc2
Name
(RefSeq) host cell factor 2 isoform X1
KO
K27390
host cell factor 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133493280 (hcfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133493280 (hcfc2)
03029 Mitochondrial biogenesis [BR:
sbia03029
]
133493280 (hcfc2)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
133493280 (hcfc2)
Mitochondrial biogenesis [BR:
sbia03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
133493280 (hcfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
fn3
NANM
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
133493280
NCBI-ProteinID:
XP_061662451
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All DBs
Position
20:10593009..10599844
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AA seq
709 aa
AA seq
DB search
MTTEEPRWRKVPSVTGVIPRSRHGHRAVAIRELIVVFGGGNEGIAEDLHVYNTVSKQWFL
PAVRGDIPPGCAAHGLVCEGARILLFGGMVEYGKYSNNLYELQANRWLWKKLKPRAPKNG
LPPCPRIGHSFTLVGNKCYVFGGLANVSEDPNGNVPQYMDDMYELELQSVSGARGWRVPE
TKGGGPSARESHSAVAYTGPGSPKLFIFGGMQGSRLDDLWQLDLSTMLWSTPETRGSVPL
PRSLHSASVIGNKMFVFGGWIPVPESEKQNEAGIKWICTNSLFALNLDTMSWQNLGPEYD
DIGLQLQSRNLQKLEHDDGGRPKARAGHCAAAIGSRLYIWSGRDGYHKNLYQVCCKDLWY
LETDRPACADAVMLIKSTVGTLHVAWCPLSGADCYLLQIQPVHPQLKQDLTSTDKERKDK
DSQSLDVTSERTTEDQGNVSAQDGSKQHNDQVKSSNSSQEGGQESSCSAHRQKAANPAQN
PEGAAWFDVGVFKSLFSEVRHYYLPADNNRATPTLGGRPPVARERKLPDSDDYQDREKKE
LEPGRSYRFRVAGVNCFGQGDFSQVSEFKTCLPGFPGAPSAVKISKANELVHITWEAPTS
PSGRILEYSMYMAVKKSRSSSSEGPGQLAFIRIYRGVKMFCTVGSNHLVNAHLDCSASNR
PALVFRIAAKNEQGYGPATQIRWIQDGFKMQGESKGCGAQDLDGGDSSS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgaagagccccgatggcgaaaagtcccttcggttacaggcgtcataccgcgt
tcgagacacggacaccgggcggtggccatccgggagctgattgtggtgtttggcggcgga
aacgaagggatagcggaggacctccatgtttacaacactgtttccaagcaatggtttctg
cccgcggtgaggggagacatccctcctggttgtgccgcccacggcttagtctgcgaaggt
gcccggatactgctctttggtggcatggtggagtatggcaaatactccaacaacctctat
gaacttcaggctaatcgctggctttggaagaaactgaagccccgagcgcccaagaacggc
ttacccccgtgtcctcgtatcggccacagtttcaccctcgtgggcaacaagtgctacgtg
ttcggagggctggccaacgtcagcgaggaccccaacggcaacgtcccacagtacatggac
gacatgtacgagttggagctgcagtccgtgtcgggggcgaggggctggcgcgtcccggag
acgaaaggcggcggtccttcggcgcgagagtcgcacagcgccgtcgcctacaccgggccg
ggctctccaaagctctttatctttggagggatgcaaggcagccgattagacgacctctgg
cagctggacctcagcacgatgctgtggtcaacgcccgagacgaggggttcggtgccctta
cccaggagccttcactctgccagtgtgattggaaacaagatgttcgtcttcggcggctgg
attcccgttccggagtcggagaagcaaaacgaggcggggatcaaatggatttgcactaac
tccttattcgcgctgaacttggacacgatgagctggcagaacctgggcccagagtacgac
gacatcggcctccagctgcagagccggaacctccagaagctcgagcacgacgacggcggc
aggcccaaagccagggcaggccactgcgccgccgccatcgggtccaggctgtacatttgg
agcgggcgggacggttaccataagaacctttatcaagtgtgctgcaaggacctttggtac
ctggagacagatcgaccggcctgcgccgatgcggtgatgctcatcaaatccaccgtgggc
acgcttcacgtggcctggtgccccctgtcgggagccgactgttacctcctccagattcag
cccgtccaccctcaactcaaacaagatttgacgtcgacagacaaagagagaaaagataaa
gattcccagtccttggatgtcacgagcgaacgcaccactgaagatcaagggaacgtctca
gcacaggatggttcaaagcagcacaacgatcaggtgaaatcatccaatagctcacaagaa
gggggacaggagtcgtcgtgctcagcccaccgtcagaaggctgcgaaccccgctcagaat
ccagagggagccgcgtggtttgacgtcggcgtgttcaagagcctcttttctgaggtccgg
cactactatctcccggccgacaacaaccgggcgaccccgaccctcggcggccggcctcct
gtcgccagagagaggaagctgccggattcggacgactaccaggacagagagaagaaggag
ctggagccgggccggagttaccgcttcagagtggcgggcgtcaattgcttcggccaggga
gacttcagccaggtcagcgagttcaagacgtgcctgcccggcttccccggagccccctcg
gcggtcaagatctccaaggccaacgaattagtccacatcacatgggaagctccgacgtct
ccatcgggccgcatcttggagtattccatgtacatggcggtgaagaagagccgctcgtcc
agctcggaagggccgggccaactggcgtttatccgaatctaccgcggtgtcaagatgttc
tgcacggtgggctccaaccacctggtcaacgcgcacctggactgctccgcctccaaccgg
ccggcgctggtgttccgcatcgccgccaagaacgagcagggctacgggccggcgacgcag
atccgctggatccaagacggcttcaaaatgcaaggcgaatccaaggggtgcggcgcgcag
gatctggacggcggcgacagctccagctga
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