Syngnathoides biaculeatus (alligator pipefish): 133493404
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Entry
133493404 CDS
T09681
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1 isoform X1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133493404 (fbxo18)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133493404 (fbxo18)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133493404 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
F-box-like
F-box
Viral_helicase1
AAA_12
AAA_30
PhoH
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
133493404
NCBI-ProteinID:
XP_061662716
LinkDB
All DBs
Position
20:complement(13169452..13182635)
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AA seq
1027 aa
AA seq
DB search
MEVAVKGRAKRKHLNVDDLEKSKAGLEALINPQNINRSWRNSHNLKPRTTMKRRKCGNYI
TFTPFLHNLECCDPGTSLLTPTCTNGLHGERAAEDEVSSDDEDLLPAGLEEPENKDIDYF
EGITAEMFEEDFDGSHETVHEEPEVEALPDATYGLLGSSEELLVPCGHIDDLPEEVLRRV
LGLLPARDMYRSAGLVCHRWRGIIEDAKFMPFKKRYYRFLMNEGATSNEVYSAALQGGIT
NPEESEHSVRNLVIAMANHKFGERVNPTEVLERLKKHRFFPHAEASIRLYIRNVPRCHNL
EIEGPNPFAAMAVILLLSERIDDVLALVTLLSGCMLYGAVTEYLNHVATLLLAARRRNVK
ISERLHYNIYYVLHLRDNGPFSVSSSENRGSHMKMTSEQHRVLSHDIEKDHVVKIVAFAG
TGKTATLVKYAEQRPHLRFLYVAFNKSVASEASQRFPVNVDCKTIHSLAYRDIGKMYQKK
LSFNLHPFSINTVLPKGRGGYANAKVVVTTLKNFMASIDPTIAASHVPSEQVSLLGLKKY
ITEEEKQMYVEDAKNIWMKMKDVNETTVQGYHMPHDGYLKLWQLRNPKVCLSDRYDVIFI
DEAQDCTPTIMDVLLTQKCGKVLVGDPYQQIYSFRGAINALESVQHTHIYYLTQSFRFGA
EIAYVGATILRVCKQVEKILVGGRQQGERSRYRRKSKSKTTGPSSRFHPLVNFSHISQGS
VFDEKSAQAQQDVANGRSPAKGNTAILSRCNFGVFSEAVRLTEANPECTIHFIGGLDNIG
LNTIKDIWYLMEDNHNRKLIKDRLIATFVKIEQNPLEALKNYAQKTEDRNLEAKICIVTK
YKNRIPALVKCLNKQAEGNAKKADFILGTVHKAKGLEFDIVIVSDDFVTVPFSRHAMYRS
KFSMSEVPETEWNLLYTAVTRAKTTLIITKTIHRILTLSGEYLLKSVMPVRPLKAGETPA
CVINACTNCIAPGVPFMMCKRQIPYSTGTSREGALCDRCVWIRAGPIARLMTDRVLSPAE
SDQHVAP
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagctgtaaaagggcgggcaaagaggaagcatttgaatgtagacgacctggaa
aaaagcaaagcaggcctcgaagctctcattaacccccaaaacatcaatagaagctggaga
aattctcacaatttaaagccaaggacaactatgaagagacggaaatgtgggaattacatt
acatttacacctttcttacataatctcgagtgctgcgatccaggcacatcattactcacc
cccacgtgcacaaatgggcttcatggagagcgcgcagccgaagacgaggtcagttcggat
gatgaggatttgttgccggcgggcctcgaggagcctgaaaacaaggacatcgattacttc
gaaggcataacggccgagatgtttgaagaagacttcgatggctctcacgagacggtgcac
gaagagccggaggtggaggctctgcccgacgccacctacgggctcttgggcagcagcgaa
gagctgctggtgccttgcggccacatcgacgacctcccggaggaggtgctgaggcgggtc
ctcggcctccttcctgcccgagacatgtacaggagcgccggactcgtgtgccatcgctgg
cgcggcataattgaggacgccaagttcatgccgttcaagaaaaggtactatcgctttctg
atgaacgagggggctacgtcgaatgaggtctactccgcggcgctccagggcggcatcaca
aacccggaagaatccgagcacagcgtccgaaaccttgtcatcgcgatggcaaaccacaag
ttcggcgagagggtgaatccgacggaggttctggagcgtttgaagaaacatcgctttttc
cctcacgccgaggcctccatcagattgtacatccgcaatgttccccggtgccacaatcta
gaaattgaggggcccaacccgtttgcggccatggcggtgatcctcctcctcagtgagcgc
atcgacgacgtcctggctttggtgaccttgctgagcggctgcatgttgtacggcgccgtc
accgagtacctgaaccacgtggccacgctgctgctcgcggccaggaggcgaaacgtgaag
atcagcgagaggttgcattacaacatctactacgttcttcatctgagggataatggccca
ttttccgttagttcctcagaaaacaggggctcacacatgaagatgacctcggaacagcat
cgggttctcagtcacgacattgagaaagaccacgtggtgaagattgttgcgtttgctggc
acggggaaaacagccacgctggtcaagtatgccgagcagcggccacatctccgcttcctg
tacgtcgccttcaacaagtcggttgctagcgaggcctcgcaacgtttcccggtgaacgtg
gactgcaagactatccactcgctggcctacagagacattggaaaaatgtaccaaaagaaa
ctcagctttaatctgcaccctttctccatcaacacggtcctgcccaaaggccgaggcggg
tacgccaatgccaaagtggtagtcaccactctcaaaaacttcatggcttccatcgatccg
acaatcgccgcgagccacgtgccgagcgaacaagtgagtcttctgggcctaaagaagtac
ataactgaagaggaaaaacagatgtatgtggaagacgcaaagaacatttggatgaaaatg
aaggacgtcaacgagacgacggtacaaggctaccacatgccccacgatggttacctcaag
ttatggcagctccgtaatccgaaggtctgcctctccgaccgatacgacgtcattttcatc
gacgaagcccaggactgcacaccgaccattatggatgtgctgctgacacagaaatgcggc
aaagtgctggtcggggatccctaccagcagatttacagcttcagaggagccattaatgca
ttggagagtgtccagcacacgcacatttactacctaacacagagtttccgctttggcgcc
gagatcgcctacgtgggcgccaccatcctcagagtgtgcaagcaagtcgaaaagattctc
gtcggaggaaggcagcaaggtgaacgctctcgttatcgcagaaagtctaaaagtaaaaca
accggcccttcctctcgcttccatcctctcgtcaatttctcacacatttctcaagggagc
gtgtttgacgaaaaatcggcccaggcccaacaggatgtggccaacggcaggagccctgcc
aagggaaacacggccatcttgtccaggtgcaattttggtgtgttcagcgaagctgtgcgg
ctgaccgaggccaacccggagtgcacaatccacttcatcgggggcttggacaacattggc
ttgaatacgatcaaggacatttggtacttaatggaagacaatcataaccgcaaactgatc
aaggaccgcctcattgccacgtttgtcaaaatcgaacaaaaccccttggaggcgctgaaa
aactacgcccagaagacagaagaccgcaacctggaggccaagatctgcatcgtgaccaaa
tacaaaaatcgcatccccgcactggtcaagtgcctgaataagcaagcggagggaaatgcg
aaaaaggcagacttcatactcggaacagtccacaaagctaaaggcctggaatttgacatt
gtgatagtcagcgacgactttgtcaccgttcctttttccagacacgccatgtaccggagc
aaattttccatgagtgaagtccccgaaactgaatggaacctgctctacacggcggtgact
cgcgccaaaacgacactgatcatcacaaaaaccatccaccgcatcctcaccctgtcgggg
gaatacctgttgaagtcggtgatgcccgtcaggccgttgaaagcgggggagacgccggcc
tgcgtgattaacgcctgcaccaactgcatcgcgcccggcgttcctttcatgatgtgcaaa
agacaaataccatactcgactggcacgtctcgcgagggcgcgctgtgcgacaggtgcgtg
tggatccgcgcgggcccgatcgcgcgcctcatgaccgaccgcgtgctctccccggctgaa
tccgaccagcacgtggccccctga
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integrated database retrieval system
