Syngnathoides biaculeatus (alligator pipefish): 133493431
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Entry
133493431 CDS
T09681
Symbol
cacna2d4a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04260
Cardiac muscle contraction
sbia04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133493431 (cacna2d4a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
133493431 (cacna2d4a)
04261 Adrenergic signaling in cardiomyocytes
133493431 (cacna2d4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133493431 (cacna2d4a)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133493431 (cacna2d4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
HbrB
VWA_3
VWA_2
dCache_1
VWA
MCP-like_PDC_1
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
133493431
NCBI-ProteinID:
XP_061662766
LinkDB
All DBs
Position
20:8734077..8791105
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AA seq
1486 aa
AA seq
DB search
MERESSLRRISRSLHSRLKLGSGSSSSLTDLSQARTPSAGGGAEKVALVDEGSRDKGTQQ
RRAGANATWNSIHNAVISVFQRKDLGENELFTLNEGVRQLLKTELGSFVTEYLQNQLLTK
GMVILRDKMRFYEGQKLLDSLADTWDFFFCDVLSMLQAIFCPVQGKEPSVRQLALLHFRN
IITLNLKLDEALSRPRARVPPSIIQMLLILQGVHESKNVTDDYLRLECLIQKVVSPYLST
HGLYSQNEKPLQPSAPSNWGNPPTVKNPVVRSKSYNVPVLSPVEEYDVDSSVGGGPGIRR
HSVSEMTSCTEECVSVAESSTEHSEVWPRTPVPITACHPVRTSARTASRNLWIQSPTRCF
WSSQLLILEEQHAAAADKVWPDRSAEMDANAGDAGRRRRNGPRPERLTMLPWIFLCSSLW
LIVDGQMKISPETVQKWAESFGKDIESLSTKYSGSQLLQKKYKDVEGVLKIEEVDGEELV
KKFAEEMEKMLGRKMKSVKRLAEAAEDADLYHVYNETLEFEYYNSMLINTVDEDGNPLPL
GGEFPLEKNEHFSRLPVNTQQSNIQVPTNVYNRDTDILNGAYMSEALNDVFIDNFQKDPT
LTWQYFGSSSGFFRLYPGIQWIPDENGVVTFDCRNRNWYIQAATSPKDVVIVVDVSGSMK
GLRLTIAKHTINTILDTLGENDFVNIIAYSDYVRYLEPCFKGILVQADLDNREHFKLLIN
EMHVKGEGKVKNAMKESFRILNEAAALGQGSLCNQAIMLITDGAMEDFQDVFEEFNWPER
RVRVFTYLIGREMTFAENVKWIACNNKGYYTHISTLADVQENVMEYLHVLSRPMVINHDH
DIIWTEAYMDSVLFNSQAQSLLLMTSVAMPVFSKKKETLSHGILLGVVGTDVSLKELMRL
ALRYKLGVHGYAYLITNNGYILSHPDLRPLYKEGKKLKPKPNYNSVDLSEVEWEDTEEKL
RTAMVKGETGTLSLDVRTSVDKGKRVMFLKNDYFYTNINETPFSLGIVLTRGYGQYIFIG
NVSVEEGLHDLLAPDLTIASEWTYCETDIDPAHRKLSQLQAVVGYLTGKEPDLECDVQLM
QQTLFDAVVTAPLEAYWTALMLNPSGMDDGIETAFLGTRSGLMRFQRYTGIENRVGMSFL
TSADKENMFTLDHFPLWFRRAAEYPAGQFLYYMPRQETRAGRIVIATTAITVTVGKKTAI
AGAIGVQMTLEVMESRFWAIASQPNDTDCSDAEGICPLRCDSFDLECYVIDNNGFVLISK
QRADAGRFFGEVDGPVMTTLIRMGMFKRVPLFDYQAMCKMSVHSVSSARPILSSFYALAS
TLKWFLSNFLLFLLEFNVCGFWHAEHFADAYAHKKKGDILQPCDTEYPSFVYEPSVKETN
SIIKCGHCQKMFVVQQIPQSNLLMLVVQADCDCARQYSPITMEPKEVKYNSSVKCERMRS
QKIRRRPESCHAYHPQENANDCGGASTASVSAFLFLLSPSIASFLS
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcgagagctcgttgaggaggatttcgaggagtctccacagcaggttgaagctg
ggcagcggctcgtcctccagcttgaccgacctctcgcaggccaggactccatcagcagga
ggaggagcggagaaggtggcgctggtggacgagggcagcagggacaaagggacccagcag
agaagagcaggggccaacgccacctggaacagcatccacaatgcggtcatctccgtgttc
cagaggaaggacttgggagaaaatgagctcttcactctgaacgaaggtgtcaggcagctg
ctaaagacagaactcggctcctttgtcaccgagtaccttcagaatcaactgctcaccaaa
ggcatggtcatactgcgagacaagatgcgattttatgaaggccaaaagttgttggactct
ctggctgacacctgggacttcttcttttgtgatgttctgtccatgcttcaagccatcttc
tgccccgtgcagggaaaggagccatcagtacgtcagctggctctgctccacttccggaat
atcatcaccctcaacctgaagctggacgaagctctgtcgcggccccgagcccgagtgccg
ccctccatcatacagatgctgctcatacttcagggcgtccacgagtccaaaaatgtcacg
gatgactacttgcgtctggagtgtctcatccagaaggtggtctctccttacctcagcacc
cacgggttatattcgcaaaatgagaagcctctccaaccctccgcgccatccaattgggga
aatccccccacggtcaagaaccctgtggtacgttctaagagctacaatgttcccgtgctg
agccctgtggaggagtacgacgtggactcatctgtcggaggaggccccggtatcagacgc
cactctgtgtcggagatgacttcctgcacggaggagtgcgtctcagtggcagaatccagc
accgagcactcagaggtctggcccaggacaccagttccgatcacagcctgccatccagtc
cggacatcagcgcggaccgcgtcccggaatctctggattcagagcccgacgcgatgtttc
tggagttctcagttgctcattctggaggagcaacacgcagctgcagcggacaaagtgtgg
cctgacagatctgcagagatggacgcaaacgccggcgacgctggacggcggcgcagaaat
gggccacggccagagaggctgacgatgctcccgtggattttcctgtgcagttcgctgtgg
ctgattgtcgacggccagatgaagatctcaccagagactgtacagaagtgggccgagtct
ttcggcaaagatatcgagtccctctccaccaaatactccggatcgcaattgctccaaaaa
aaatacaaggacgtggagggtgtgttgaagatcgaggaggttgacggggaggagctggtc
aagaagtttgcagaggagatggagaagatgctcggaaggaagatgaagtccgtcaagaga
ttagcagaagcagccgaggatgcggatctttaccacgtgtacaatgaaacgctggagttt
gagtactacaactccatgctgatcaacacggtggacgaggacggcaaccctttgcccctg
ggaggagaattcccgctggaaaagaacgaacacttcagcaggctgccggtcaacacgcag
cagagtaacatccaagtgcccacgaacgtctacaacagagatacagacatcctaaatggc
gcgtacatgtcggaggctctcaatgatgtcttcatagacaacttccagaaggatcccacg
ctcacctggcagtactttggcagctcctccggcttcttcaggctctacccagggatccag
tggatccccgacgaaaatggggtcgtcacatttgattgcagaaacaggaactggtacatc
caggcagccacctcccccaaagatgtggtcattgtggtggacgtgagcggcagcatgaag
gggctcagactcaccatcgccaagcacaccatcaacacgatactggacacgctgggggag
aacgactttgtcaacatcatagcttacagcgactacgttcgatacttggaaccttgcttc
aagggaattttagtccaagccgatctggataacagagagcacttcaagcttctgattaac
gaaatgcacgtcaaaggagagggcaaagtaaagaatgcaatgaaagagtcattcaggatc
ctcaatgaggccgctgcgctgggccagggcagcctgtgcaaccaggccatcatgctgata
acagacggtgccatggaggacttccaggatgtttttgaagaattcaactggcccgaacgg
cgggttcgggtgttcacttacctcataggacgtgaaatgacgtttgctgaaaatgtcaaa
tggatcgcctgcaataacaagggttattacacgcacatttcgacgctggcagacgtccaa
gaaaacgtgatggaatacctgcacgttctcagtcggcccatggtcatcaaccacgaccat
gacatcatctggacggaggcctacatggacagtgtgctgttcaacagtcaagcccaaagt
ttgcttctgatgacctcggttgcaatgcctgtgttcagcaagaaaaaagagacgttgtct
catggaattttgctgggggtcgtcggaactgacgtgtctctaaaagaactaatgagatta
gctctgagatacaagctgggtgtccacggttacgcttatctcatcacaaacaatgggtac
atcttatctcatcctgacctccgtcctctgtacaaggaaggtaagaagctgaagcccaaa
cccaactataacagcgtcgacttgtcggaggtggaatgggaagacaccgaggagaagctc
aggacggccatggtcaagggagaaaccggtacattgtccttagacgtgaggacctcagtt
gataagggcaaacgagtgatgttcctcaagaatgattacttctacaccaacatcaatgag
acaccgttcagtcttggcatcgtgttgacaagaggatatgggcaatatatattcattgga
aatgtctctgtggaggaaggtctccatgatttactggctcccgatttgaccattgccagt
gaatggacctactgcgagaccgacatcgacccagcacatcgtaaactaagccagctgcag
gccgtagtcggatacctgactggtaaagaacccgatctggagtgtgatgtgcagctcatg
cagcaaaccttatttgacgcagtggtgacggctccgctggaagcttactggactgccctc
atgctcaacccatcaggtatggacgacggcattgaaacggctttcctgggcacacgttcc
ggcttgatgagattccaacgttacacgggcattgagaaccgagttggcatgtcgttcctg
acatccgcggataaagaaaacatgttcacgctggaccacttcccactgtggttccgcagg
gcggccgagtaccccgccggacagttcctgtactacatgccccgacaggagacccgagcg
gggagaatcgtgatcgccaccactgccattacagtgaccgtaggcaagaagaccgccatc
gctggagccattggtgtccaaatgactctggaggtgatggaatccagattttgggccatt
gcctcacagccaaacgacactgattgctctgacgcggaaggaatttgtcctcttcgctgt
gacagctttgatctggagtgctacgtgattgacaacaatggctttgtcctcatttccaaa
cagcgcgctgacgccggaaggttctttggcgaggtcgacggccccgtcatgacgacgctc
atcagaatgggaatgttcaaaagggtgcctctgtttgactaccaggcgatgtgcaagatg
agcgtacactccgtcagcagcgcccgtccaattctcagctcgttctacgcattggcatcc
accctcaagtggttcctatccaacttcctactgtttctccttgagtttaatgtctgcgga
ttctggcacgcggagcactttgcagatgcctacgcgcacaagaaaaagggggacatcctg
cagccgtgcgacaccgagtaccccagcttcgtctacgagccgtcggtcaaagagaccaac
agcatcattaagtgtggacactgccagaagatgtttgtggtgcaacagatcccgcagagc
aacctcctgatgttggtcgtccaggctgactgcgactgcgccaggcagtactcgcccatc
accatggaacccaaggaagtcaaatataactcctcagtcaagtgcgagcggatgcgctcc
cagaagatccgcagacgtccggagtcgtgccacgcttaccaccctcaggagaatgcaaac
gactgcgggggagcctcgaccgcttctgtctctgccttcctcttcctcctttctccctcc
atcgcctcatttctctcctga
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