Syngnathoides biaculeatus (alligator pipefish): 133493544
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Entry
133493544 CDS
T09681
Symbol
dhx57
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sbia03012
]
133493544 (dhx57)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133493544 (dhx57)
Translation factors [BR:
sbia03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133493544 (dhx57)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
RWD
HA2_N
zf-CCCH_4
zf-CCCH
AAA_22
NPHP3_N
AAA_19
nSTAND3
Torus
NB-ARC
ResIII
zf_CCCH_4
AAA_16
Motif
Other DBs
NCBI-GeneID:
133493544
NCBI-ProteinID:
XP_061662963
LinkDB
All DBs
Position
20:complement(14799910..14815155)
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AA seq
1399 aa
AA seq
DB search
MSARRRGGKPNRGGGKFNKPRGGGGGRKGGSGHWDDDDDDDFTLDFGPRPSSRPTKTRGG
GSHAGSRRSDNPGWGGGDRSRYNRTESVLPKSLAKNRACAKASDSSRAEASSLPMQKIFM
TDKNQELLKELLWDLRTQDFDEHEADTGFADLQEEEEHDELDQREEGQFWSTKDEPVERA
ESPREYESDNEHPPPEPVVSVFAISKLRRYGFDXERSKQALESNGGEFGSTLEQLLQKVY
TERYGQDADLSGAVLSAMPADECLNQRQEEALALAAIYGDRFQERIPNSVWVITLDGLFL
TDKIGKSYSVNKNGLPSSKKVCQFYLKGRGCKYGNKCRFKHQSPDKGLSDLQGPGQAGIS
SYSPSEYELEIRFPKGNRYPSQAPVVAFSTNDESVGAAGRLSVTERLFGEALTAAQNNEP
VVYTLVSICEDELTMKELLNVAHHKYSKPPPLLVPPTSVAPAKRKSVTTNASEEKVCPSR
RITPPVQWTGEAEGREDDDEVSAVPVENVSSVNLRKKVANHLNSLQENGKLCRDFHRKQS
SKRFRSMLEQRTKLPAWDEKDNILDLLDGCQVLVVSGKTGCGKTTQIPQFILDASLSGPA
DKVANIVCTQPRRISAISVAQRVAQERAESLGDSVGYQIRLESVRSSATRLLYCTTGVLL
RRLEADADLQGVTHVIVDEVHERTEESDFLLLVLKDLILQRPDLKIILMSATLNANLFSE
YFYDCPTLHIPGRTFPVTQFFLEDVISLTRYVIEDGSPYMRSRRQNSSASGQGRRGEPKD
IVDTLGDDMWNFMSFTKKDFVKDSVPDQQLGLQELTIRFKDCKASVLKTIAVMDLDKINM
DLIESLLEWVVDGNHSYPRGAVLVFLPGLAEIKMLYEQLQSNRKFNNRRTDRCVVYPLHS
TLSNEEQQAVFSRPPEGVTKIIISTNIAETSVTIDDVVYVIDCGKMKEKRYDASKSMESL
EDSWVSRANALQRKGRAGRVASGVCFHLFTSHCFKHQLAEQQLPEIQRVPLEQLCLRIKI
LDVFAEQTLESVFCRLIEPPATGSLDAAKRRLQDLGALTAEEKLTPLGYHLACLPVDVRV
GKLMLFGAIFRCLDPALTIAASLAFKSPFVSPWDKREEANEKKMAFAVASSDHLALLQAY
KAWCDAEKSPNLSGPRYCRENFLSLRVLQEIACLKRQFAELLSDIGFIKEGLRSRLIERL
GSKGSDGVLEATGPEANLNADNIHLMSAMLCAALFPNVVQVQAPEGLYKISVKGVVKVLP
KANELRFLTKSDGCVHVHPSSVNYNVRKFPSPYLVYLEKVKTSRVFIRDCSMVSVYALVL
FGGGEVNVEMHKGQFVISLDDGWIRFAADSHQVAELVKELRWELDRLLEDKIQNPSMDLC
SCPRGSRIIRMIVNLVSTQ
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaggagaagaggtgggaagcccaacagaggtggagggaagtttaacaagcca
agaggaggaggcggaggtagaaaaggaggaagtggccactgggatgatgacgatgatgat
gatttcacccttgattttggaccacgtccatccagcagacccaccaaaacacgaggtggc
ggcagccatgccggcagccgtcggagtgacaatcccggatggggaggtggcgatcgatcc
agatacaatcgaaccgagtctgttctccccaaatccctggctaagaacagagcctgcgct
aaggcaagtgacagcagcagggcagaggcgagtagcttgcctatgcagaagattttcatg
accgacaaaaaccaagaactcctcaaggagctgctgtgggacctgcggacacaggacttc
gacgagcatgaagctgacaccggattcgctgatttacaagaggaggaggaacacgatgaa
ctggaccaacgcgaggaagggcagttttggagcaccaaggacgagcccgtggagagagcg
gagagcccgagagaatacgaatcagacaacgaacaccctccacccgagcctgtcgtctcc
gtgtttgctatcagcaaactccgcaggtatggctttgacncggagcgcagcaagcaagcg
ctggagtccaacggaggagaatttggctccacactggagcagctccttcagaaggtttac
accgaacgctacggacaggacgcggacctttccggcgccgtcctttccgccatgcccgcg
gacgagtgtctgaaccagaggcaggaggaagctctggcgctggccgccatttacggcgac
cgcttccaggagcgcattccaaactcagtgtgggtcataactttggatggcctgttcctc
acggacaaaatcggaaaaagctacagcgtaaataagaacgggctcccgtcttcgaaaaag
gtttgccagttctacttgaaaggaagaggctgcaagtatggcaacaaatgcaggttcaag
caccaaagtcctgataaaggcttgtcagatctacagggaccaggtcaagccgggataagc
agctattctccctcggagtacgaactggagatccgtttcccgaaaggaaaccgctaccca
tctcaagcgccagttgtcgccttcagcaccaacgacgagtccgtcggcgccgccgggagg
ctcagcgtgacggaaaggttgttcggggaggcgctgaccgccgcccaaaacaacgaacct
gtggtttataccctggtcagcatatgcgaggacgagctcaccatgaaggagctgctgaac
gtggcgcatcacaagtacagcaagccgccgccgcttctggttcctcccacctctgttgcg
ccggcaaagcgtaaaagcgtgacgaccaacgcttcggaggaaaaggtctgtccgagcaga
aggatcacgccgccagtacaatggactggagaggcggaggggcgggaagatgacgacgag
gtctccgccgtccccgtggagaacgtcagctctgtcaacctgcggaagaaagtggccaat
catctcaactcgctccaagagaacggcaagctgtgcagagattttcacaggaaacagtcc
tccaaacgcttcaggtccatgctggagcagaggacgaagctgccggcttgggatgaaaaa
gacaacattctggatctgttggacgggtgtcaagtgttggttgtcagcggcaagacgggg
tgcgggaagacgactcagatcccccagttcattctggacgcgtcgctgagcggcccggcg
gacaaggtggccaacatcgtctgcactcagccgcgccgcatctccgccatctcggtggcc
cagcgggtggcgcaggagcgtgccgagagtctgggcgactccgtgggctaccagatccgc
ctggagagcgtccggtcgtctgccaccaggctgctctactgcaccacaggggtgttgctg
agacggttggaggccgacgccgaccttcaaggcgtcacccacgtcattgtggatgaggtg
catgagcgcacagaggagagtgacttcctcctgttggtcctcaaagacctgattcttcag
agacctgacttgaaaattatcctcatgagcgccacactcaacgccaacctcttctctgaa
tatttctacgactgtccaactttacacatacctggtcggactttccctgtcacccagttt
ttcctggaggacgtcatctctttaactcgctatgtcattgaggacgggagcccttacatg
cgctcgaggagacagaactcctctgcgagcgggcagggtcgaagaggagagccgaaggac
atcgtagataccttgggggacgacatgtggaacttcatgtctttcactaaaaaggacttt
gtcaaagactcggtacccgaccaacaactcggcctgcaggaactcactattagattcaaa
gattgtaaagcatccgtgttgaagaccattgctgtgatggacctggacaagatcaacatg
gacttgattgaaagtctgctggagtgggttgtggatggaaatcacagttaccccagaggt
gcagtgctggtgtttcttccaggcctcgctgagatcaagatgctctacgagcagttgcag
tcaaaccggaagttcaacaacaggcgcacagacagatgtgtggtgtaccccctccactcc
actctgtccaacgaggagcagcaggccgtcttcagtcgccccccggagggcgtcacaaag
atcatcatctccaccaacatcgccgagacctcggtcaccatcgacgacgtggtctacgtc
atcgactgcgggaagatgaaggagaaaaggtacgacgcatccaaaagcatggagagcctg
gaggattcctgggtgtcacgggccaacgcgcttcagagaaagggcagggcgggtcgtgtg
gcctccggggtctgtttccacctcttcaccagccactgcttcaagcaccagctggctgag
cagcagcttcccgagatccagagagttcctctggagcagctttgcctccgcatcaagatc
ctggacgtgtttgcagagcaaacgctggagtcggtcttctgtcgcctcattgagccgccg
gccacgggcagcttggacgcggccaagcggcgcctgcaggacctgggcgccctgacggcg
gaggagaagctcaccccgctgggctaccacctggcgtgcctgcctgtcgacgtccgcgtc
ggcaagctcatgctgttcggtgccatcttccgttgcctggacccggcgctcaccattgct
gccagcctcgccttcaaatcaccttttgtgtcaccatgggacaagcgtgaggaggccaac
gagaagaaaatggcctttgcagtcgcaagcagcgaccatctggccttgctccaggcatac
aaggcttggtgtgatgctgaaaagtcacccaacttatccggcccccgctattgccgagag
aacttcctgtctttgcgagttctgcaggaaatcgcttgcctcaagcggcagttcgccgag
ctgctgtccgacatcggtttcatcaaagaggggctgaggtcccgactgatcgagcggctt
ggctccaaaggctctgacggggttctagaggctactggaccagaggcaaacctgaatgca
gataacatccatctaatgtctgccatgctgtgtgctgccctctttcctaatgtggtgcag
gtccaagcccctgaggggctttacaagataagcgtcaaaggagtggtgaaggtgctcccc
aaagccaacgagctgcgcttcctgaccaagagcgacggctgcgtccacgttcacccctcg
tccgtcaattacaacgtacggaaattccccagtccctacctggtgtacctggagaaggtg
aagacctcccgggttttcatccgggactgcagcatggtgtccgtgtacgctttggtgctc
tttggaggcggggaggtcaacgtcgagatgcacaagggccagtttgtcatatccctcgat
gacggatggattcgattcgctgccgattctcaccaggtggccgaactggtgaaggagctg
cgctgggagctggaccgcctgctggaggacaaaatccagaacccgagcatggacctgtgc
agctgcccccgcggctcccgcatcatccgcatgatcgtcaacctggtgtccacgcagtag
DBGET
integrated database retrieval system
