Syngnathoides biaculeatus (alligator pipefish): 133493688
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Entry
133493688 CDS
T09681
Symbol
cntn1b
Name
(RefSeq) LOW QUALITY PROTEIN: contactin 1b
KO
K06759
contactin 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133493688 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133493688 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sbia00537
]
133493688 (cntn1b)
Cell adhesion molecules [BR:
sbia04515
]
Immunoglobulin superfamily
Contactins
133493688 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sbia00537
]
Others
133493688 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Motif
Other DBs
NCBI-GeneID:
133493688
NCBI-ProteinID:
XP_061663329
LinkDB
All DBs
Position
20:9056382..9066655
Genome browser
AA seq
1040 aa
AA seq
DB search
MISTALLLLALLSSAPVTVAILFGEPRIFGEDATGYGPIFEEEPVDVVYTEDSPDGRISM
NCRARANPPASYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPKQKKHAGTYICVAWNIY
GTLISKEGRVKFGFLEDFPQEDRDPVTVKEGQGAVLLCVPPKAWPEEVSYRWIFNEFPVF
LNMDRRRFVSQRTGNLYISKVEAQDAGNYSCFVSSPVLGKSVFSKFIPLIPLPPEDGEER
KYPADIRVKFPDTTALLASNITLECFALGNPIPHIVWRKVDATDLPANHEIGESGAVLHL
YNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETINNTQADIGSEHTMRCVASGK
PFPFIRWYKDGYMSGKGELKFSSLTFADSGMYQCIAENYWGIKYANAELRVIAFAPTFDF
DPLKKQLLGARDGRVLIECRPRAAPRPRFAWTKGKELLFNSSRISVMSDGTLEILNATKN
DEGFYTCFAENDSGKANSSGYLSITEATRITAAPEDTEVKVGDEVVLPCAASYDPTLDIT
FIWAIDFRVIDFDAEWQHYERNMNEEGSGNLRIKNTQIWHEGRYTCTAQTVVDSDTAFAD
LKVVGVPGPPGVIRVEDIGDTWVKLLWTKGAEHNSPILYYSIQTRHYWALHEDDWRNAST
LPALLDGTLEQAKVTDLYPWMEYQFRIIATNEYGSGEASIPSLKIKTWDARPVVPPTDVQ
GYGSRNGEIIITWTPVQPWYFYGKKFGYVVAFKPHNGYQWWYETISDPETRRYVHKDPFF
LPGDADLLVREFQVKVKTVNVKGDGPYSPITVIFYPRDIPIESPTDVYARPVSSTEALVW
WLPVVDTGTGLQQYIEGYQVKYWRKYDDAEQGANRIFVNAXASHTRLENMLPDSHYLIEV
RAFNGAGLGPPGEHCEMFTKRPPPAEPPRMWRFISWTGKWLYVWWDHITYDWFGNVSFPL
YYKVMFRKTGYIYGKVYVTGWHFMDFPMPQFGDYELMVRGRYEGGDGPIRTIELLGKAST
SAPSLGLVAAVSLALCIARV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgatttccaccgctttgctgctactggccctcctctcctcggcccctgtcacagtggcg
atcctattcggggagcccaggatatttggagaggatgctactggctacggtccaattttt
gaggaggagccggtggatgtggtctacaccgaggactcccccgatggaaggatctcgatg
aactgcagggcacgggccaacccgccggcctcatacagatggcgccgtgacaactgggag
atcaagctgatggagcagccggatgaacactacagcctcgtggggggcaacctggtcatc
accaacccgaagcagaagaaacacgccggcacgtacatttgcgtggcttggaacatctac
ggcacgctcatcagcaaggagggacgggtcaagtttggatttctggaggactttcctcaa
gaagaccgagatcccgtcaccgtaaaagaaggccagggtgcagttctgctgtgcgtgccc
cccaaagcgtggccagaggaggtgtcctaccgctggatcttcaacgagttcccggttttc
ctcaacatggaccgccggcgctttgtctcgcagaggaccggcaacctttacatctccaag
gtggaggctcaggacgccgggaactactcgtgcttcgtctccagccccgtcctggggaag
agcgtcttctctaagttcattcccctcatcccgttgccgccagaagacggtgaagagaga
aaatacccagcagacatcagagtgaagttcccggatacgacagcactgctggcgtccaac
atcacgctggaatgctttgctctggggaatcccatccctcacatcgtgtggcggaaagtg
gacgccaccgacctgcccgcgaaccacgagatcggcgaatcgggcgcggtgctgcacctc
tacaacgtccagtacgaagacgtggggggttacgagtgcgaggccatcaacaccaaaggg
aaggactggcacaaggcctggctctacgtggagtctgccccggagtgggccgagaccatc
aacaacacccaagcggacatcggctcggagcacaccatgcgctgcgtcgcatcggggaag
ccgttcccgttcatccgctggtacaaagacggctacatgtcaggaaaaggcgagctgaag
ttctccagcctgacctttgccgactccgggatgtaccagtgcatcgccgagaactactgg
ggcatcaaatatgccaacgccgagctgcgggtgatcgccttcgccccgacgttcgacttc
gaccccctgaagaagcagcttctgggcgcccgagacggccgcgtgctgatcgagtgcaga
cctcgggcggcgcccaggcctcgtttcgcctggaccaagggcaaagagttgctgttcaac
agttcacgcatctccgtcatgtctgacggcactctggagatcctcaacgccaccaagaac
gatgaaggcttctacacgtgctttgctgagaacgacagcgggaaagccaacagctcgggt
tacctctcgatcaccgaggcgaccagaatcacggcggctcccgaggacacggaggtgaag
gtgggcgacgaggtggtcctgccctgcgcggcctcctatgaccccacactggatatcacc
ttcatctgggccatcgacttccgggtcatcgactttgacgccgagtggcaacactatgag
cgcaacatgaacgaagagggcagcggcaacctgcggatcaagaacacccagatctggcac
gagggtcgctacacgtgcacggctcagaccgtggtggacagcgacacagcgtttgcggac
ctgaaagtcgtcggtgtcccgggacctcctggtgtgatccgagtggaggacatcggcgac
acatgggtgaaactgttgtggactaaaggagctgaacacaacagccccattctctactac
agcattcagaccaggcactactgggctctacacgaggacgactggaggaacgccagcacc
ttgccagcattgctcgacgggaccctggagcaggccaaagtcaccgacctgtacccctgg
atggagtatcagttccggatcatcgccaccaacgagtatggctccggcgaggccagcatt
ccctccctcaagatcaagacttgggacgctcgcccggtggtgcctcccaccgacgtgcaa
ggttacggcagtcggaacggcgagatcattatcacgtggacgcccgtgcagccgtggtat
ttctacggcaagaagtttggctacgtcgtggccttcaagcctcacaacggataccagtgg
tggtacgagaccatctccgaccccgagaccaggcgttacgttcacaaggaccccttcttc
ctccccggcgacgcagacctcctggtgcgagagttccaggtgaaggtcaagactgtcaac
gtgaagggagacgggccgtacagccccatcacggtcatcttctaccctcgggacataccc
atagagtctccgacagacgtctatgctcgcccggtgtcgtccaccgaagcgttggtgtgg
tggctcccggtggtcgacacgggaacgggcctccagcagtacatcgagggctaccaggtt
aaatactggaggaagtacgacgacgcggagcaaggagccaaccgcatcttcgtcaacgct
ncggcgagccacaccaggcttgaaaacatgctgcccgactcgcattacctcatcgaggtg
cgcgcctttaacggagcaggcctgggcccgcccggcgaacactgcgagatgttcaccaaa
agaccgccgccggcggagcccccgaggatgtggcgcttcatctcctggaccggaaagtgg
ttgtacgtgtggtgggatcacatcacgtacgactggtttggcaacgtgtccttccctctc
tattacaaggtcatgttccggaagacgggctacatctacgggaaggtctacgtgaccggc
tggcacttcatggacttccccatgccgcagttcggagactacgagctgatggtccgcggg
cgctacgagggcggcgacggccccatcaggaccattgaactcctgggtaaggcctccacg
agcgcgccttcgctcggcctcgtcgccgcagtgtcgctggcgctgtgcattgcgcgagtg
tag
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integrated database retrieval system
